BLASTX nr result

ID: Coptis23_contig00002852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002852
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304545.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
gb|ABK96351.1| unknown [Populus trichocarpa x Populus deltoides]      111   5e-23
ref|XP_002509922.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]              103   1e-20
ref|XP_003563786.1| PREDICTED: uncharacterized protein LOC100828...    99   4e-19

>ref|XP_002304545.1| predicted protein [Populus trichocarpa] gi|222841977|gb|EEE79524.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/62 (77%), Positives = 52/62 (83%)
 Frame = +3

Query: 132 SSRGRCEYFEMPLHYPRYKKGDYETMPEWQLDCLLNQYGLPVIGDAAHKRNFAMGAFLWP 311
           S RG C  F+MPLHYPRYKK DYETMPEW+LDCLL +YGLP IGDA  KR FAMGAFLWP
Sbjct: 29  SKRGTCSCFQMPLHYPRYKKSDYETMPEWRLDCLLKEYGLPAIGDANQKRKFAMGAFLWP 88

Query: 312 SQ 317
           S+
Sbjct: 89  SE 90


>gb|ABK96351.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/62 (77%), Positives = 52/62 (83%)
 Frame = +3

Query: 132 SSRGRCEYFEMPLHYPRYKKGDYETMPEWQLDCLLNQYGLPVIGDAAHKRNFAMGAFLWP 311
           S RG C  F+MPLHYPRYKK DYETMPEW+LDCLL +YGLP IGDA  KR FAMGAFLWP
Sbjct: 29  SKRGTCSCFQMPLHYPRYKKCDYETMPEWRLDCLLKEYGLPAIGDANQKRKFAMGAFLWP 88

Query: 312 SQ 317
           S+
Sbjct: 89  SE 90


>ref|XP_002509922.1| conserved hypothetical protein [Ricinus communis]
           gi|223549821|gb|EEF51309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score =  111 bits (277), Expect = 7e-23
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = +3

Query: 132 SSRGRCEYFEMPLHYPRYKKGDYETMPEWQLDCLLNQYGLPVIGDAAHKRNFAMGAFLWP 311
           + R +C  F+MPLHYPR+KKGDYETMPEW+LDCLL +YGLP++GD   KR FAMGAFLWP
Sbjct: 26  NKRDKCSCFQMPLHYPRFKKGDYETMPEWRLDCLLKEYGLPIVGDVNQKRKFAMGAFLWP 85

Query: 312 SQINKK 329
           S++  +
Sbjct: 86  SELENE 91


>gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]
          Length = 79

 Score =  103 bits (258), Expect = 1e-20
 Identities = 43/72 (59%), Positives = 55/72 (76%)
 Frame = +3

Query: 99  NLNGLPTSVTHSSRGRCEYFEMPLHYPRYKKGDYETMPEWQLDCLLNQYGLPVIGDAAHK 278
           N+ G P S    ++ RC YF+MPLHYPRY   +Y+TMPEW+LDCLL +YGLP+ G+  +K
Sbjct: 10  NIGGRPNS--EHAKDRCGYFQMPLHYPRYTHAEYDTMPEWKLDCLLKEYGLPITGNVEYK 67

Query: 279 RNFAMGAFLWPS 314
           R FAMGAFLWP+
Sbjct: 68  RKFAMGAFLWPN 79


>ref|XP_003563786.1| PREDICTED: uncharacterized protein LOC100828471 [Brachypodium
           distachyon]
          Length = 93

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = +3

Query: 156 FEMPLHYPRYKKGDYETMPEWQLDCLLNQYGLPVIGDAAHKRNFAMGAFLWPSQ 317
           F+MPLHYPRYKK DYE MPEW++DCLL +YGLPV GD   KR FAMGAFLWP+Q
Sbjct: 39  FQMPLHYPRYKKADYEAMPEWRVDCLLREYGLPVSGDVHDKRKFAMGAFLWPAQ 92


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