BLASTX nr result

ID: Coptis23_contig00002842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002842
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514162.1| hydrogen-transporting ATP synthase, rotation...   191   4e-47
ref|XP_002324755.1| predicted protein [Populus trichocarpa] gi|1...   191   4e-47
ref|XP_004135693.1| PREDICTED: uncharacterized protein LOC101205...   190   9e-47
ref|XP_002283029.1| PREDICTED: uncharacterized protein LOC100247...   189   2e-46
emb|CAN71304.1| hypothetical protein VITISV_001728 [Vitis vinifera]   189   3e-46

>ref|XP_002514162.1| hydrogen-transporting ATP synthase, rotational mechanism, putative
           [Ricinus communis] gi|223546618|gb|EEF48116.1|
           hydrogen-transporting ATP synthase, rotational
           mechanism, putative [Ricinus communis]
          Length = 122

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/121 (77%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
 Frame = -1

Query: 427 MASKLHQLQSKAV*ASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCEELSKQLFYTRLA 248
           MASKLHQLQSKA  AS FVAK G+AYYKQLLEQNKQYIQ+P TVEKC ELSKQLFYTRLA
Sbjct: 1   MASKLHQLQSKACQASQFVAKHGTAYYKQLLEQNKQYIQQPATVEKCNELSKQLFYTRLA 60

Query: 247 ---RRAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFTAGEVVGRGFTFTGY 77
               R E+F KE+DYVK++W+N+Q+LKVEDA  AALFGLECF W+ AGE+VGRGFTFTGY
Sbjct: 61  SIPHRNESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 76  Y 74
           Y
Sbjct: 121 Y 121


>ref|XP_002324755.1| predicted protein [Populus trichocarpa] gi|118483071|gb|ABK93445.1|
           unknown [Populus trichocarpa]
           gi|222866189|gb|EEF03320.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  191 bits (486), Expect = 4e-47
 Identities = 95/122 (77%), Positives = 106/122 (86%), Gaps = 3/122 (2%)
 Frame = -1

Query: 427 MASKLHQLQSKAV*ASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCEELSKQLFYTRLA 248
           MASKL QLQSKA  AS FV+K GSAYYKQLLEQNKQYIQ+PP+VEKC  LSKQLFYTRLA
Sbjct: 1   MASKLTQLQSKACQASKFVSKHGSAYYKQLLEQNKQYIQDPPSVEKCNLLSKQLFYTRLA 60

Query: 247 R---RAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFTAGEVVGRGFTFTGY 77
               R+EAF KE+DYVKH+W+++Q+LKVEDA  AALFGLECF WF AGE+VGRGFTFTGY
Sbjct: 61  SIPVRSEAFWKELDYVKHLWKHRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 76  YV 71
           YV
Sbjct: 121 YV 122


>ref|XP_004135693.1| PREDICTED: uncharacterized protein LOC101205555 [Cucumis sativus]
           gi|449489855|ref|XP_004158439.1| PREDICTED:
           uncharacterized protein LOC101230574 [Cucumis sativus]
          Length = 122

 Score =  190 bits (483), Expect = 9e-47
 Identities = 95/122 (77%), Positives = 102/122 (83%), Gaps = 3/122 (2%)
 Frame = -1

Query: 427 MASKLHQLQSKAV*ASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCEELSKQLFYTRLA 248
           MASKL QLQSKA  AS FV K G +YYKQLLEQNKQ+IQEPPTVEKC ELSKQL YTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLLYTRLA 60

Query: 247 R---RAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFTAGEVVGRGFTFTGY 77
               R EAF KE+DYVK +W+N+QDLKVEDA  AALFGLECF WF AGE+VGRGFTFTGY
Sbjct: 61  SIPGRYEAFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 76  YV 71
           YV
Sbjct: 121 YV 122


>ref|XP_002283029.1| PREDICTED: uncharacterized protein LOC100247007 isoform 1 [Vitis
           vinifera] gi|359493934|ref|XP_003634695.1| PREDICTED:
           uncharacterized protein LOC100247007 isoform 2 [Vitis
           vinifera] gi|302143185|emb|CBI20480.3| unnamed protein
           product [Vitis vinifera]
          Length = 122

 Score =  189 bits (480), Expect = 2e-46
 Identities = 93/122 (76%), Positives = 103/122 (84%), Gaps = 3/122 (2%)
 Frame = -1

Query: 427 MASKLHQLQSKAV*ASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCEELSKQLFYTRLA 248
           MASKL QLQSKA  AS FV K G AY+KQLLEQNKQY+QEPPTVEKC  L+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVVKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 247 R---RAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFTAGEVVGRGFTFTGY 77
               R E+F KE+DYVKHMW+N+Q+LKVEDA  AALFGLEC+ WF AGE+VGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 76  YV 71
           YV
Sbjct: 121 YV 122


>emb|CAN71304.1| hypothetical protein VITISV_001728 [Vitis vinifera]
          Length = 122

 Score =  189 bits (479), Expect = 3e-46
 Identities = 93/122 (76%), Positives = 103/122 (84%), Gaps = 3/122 (2%)
 Frame = -1

Query: 427 MASKLHQLQSKAV*ASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCEELSKQLFYTRLA 248
           MASKL QLQSKA  AS FV K G AY+KQLLEQNKQY+QEPPTVEKC  L+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVXKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 247 R---RAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFTAGEVVGRGFTFTGY 77
               R E+F KE+DYVKHMW+N+Q+LKVEDA  AALFGLEC+ WF AGE+VGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 76  YV 71
           YV
Sbjct: 121 YV 122


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