BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002839
         (3245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...  1291   0.0  
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...  1278   0.0  
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...  1272   0.0  
ref|XP_002882790.1| photoperiod-independent early flowering 1 [A...  1239   0.0  
ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401...  1232   0.0  

>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score = 1291 bits (3341), Expect = 0.0
 Identities = 679/1059 (64%), Positives = 792/1059 (74%), Gaps = 14/1059 (1%)
 Frame = -2

Query: 3136 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 2960
            MASKGPRS++DHE+RA+RQKALEAPR+ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 2959 KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 2780
            KKVA+RASK  LD ATRGEKK+KEEEQRLRKVALNISKDVKKFW KIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 2779 EKKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPCTPICPDSAVDQPNGEDIEDGTELV 2600
            EKKKKALDKQL+FLLGQTERYSTMLAENLVD PY       +++ +       +D  +++
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLVD-PYKSAE---NNSAEHHMSIQCKDVHDVI 176

Query: 2599 ESPEHCENM-------DIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEELEALQDEM 2441
              P+  + +       D D                     EALIT +ERQEEL AL+DEM
Sbjct: 177  NEPKEADVVEYQSDAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQEELAALRDEM 236

Query: 2440 DIPLEELLKRYNSDK---VSMEESPLNGENVAEPIQVEENLGKGNHCFGGGETDTSNSCI 2270
            D+P+EELLKRY  DK   V  E SP + E+  + ++  +    G+      +  TSNS I
Sbjct: 237  DLPIEELLKRYAGDKGESVMKESSPEHSEDGGKIVRAGDE--NGDDLLSVSKIGTSNSSI 294

Query: 2269 I-GHHSGVSNGEISLLETDKVEVDTSQSKNQLK-GCEKLEKQPLVSCSDEQEDGDYILAA 2096
            + G     SNG+++    +  + +  QS+N  +   E   +      +DE+EDGD++L  
Sbjct: 295  VSGRRCDESNGDVATPTNNLSQCENGQSENLKEVPSETANEDFSYDFTDEEEDGDFLLGI 354

Query: 2095 DEEKDDETTMSXXXXXXXXXXXXXXXXXXXLQKESEISVEELLARYKKDFNSDEDADEEP 1916
             E+KDDETT+S                   LQKES + VEELLARYK+D + DED + E 
Sbjct: 355  -EDKDDETTLSEEEQLERVDAIDPKDEIALLQKESVMPVEELLARYKRDPSDDEDGEYES 413

Query: 1915 GYTSTSSEDLMDPQAMPERQASPIPEVVAEQD-EPGEFKQISEPDAKMDEVEHEMKSDEG 1739
             Y S  SE+  D   + E      P +  ++D + GE     +   +  E  HE  + E 
Sbjct: 414  DYASALSENNSD-SPVHEDAGQKDPAIPMDEDIKSGEHLAAIQSQEEQWESPHE--NLEK 470

Query: 1738 KXXXXXXXXXXXXXXXAQPTGNTFSTMKVRTASPFLLKHSLREYQHIGLDWLVTMYEKRL 1559
            +               AQPTGNTFST  VRT  PFLLK+SLREYQHIGLDWLVTMYEKRL
Sbjct: 471  RESEDIIADAAAAARSAQPTGNTFSTTSVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRL 530

Query: 1558 NGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT 1379
            NGILADEMGLGKTIMTISLLAHLAC+KGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT
Sbjct: 531  NGILADEMGLGKTIMTISLLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT 590

Query: 1378 YFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFKRKKWKYLILDEAHLIKNWKSQ 1199
            YFGSAKERK KRQGW+KPN FHVCITTYRLVIQDSK FKRKKWKYLILDEAHLIKNWKSQ
Sbjct: 591  YFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQ 650

Query: 1198 RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISVMVEG 1019
            RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQSHQEFKDWFSNPIS MVEG
Sbjct: 651  RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEG 710

Query: 1018 QESVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHVIYCRLSRRQRNLYEDFIASSE 839
            +E VNKEV+DRLHNVLRPF+LRRLKRDVEKQLP K EHVIYCRLS+RQRNLYEDFIASSE
Sbjct: 711  EEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSE 770

Query: 838  TQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIISSFDMGGIDMQLSSSICNMLFSGP 659
            TQATLAS NFFGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM GID+QLSSS+C+ML   P
Sbjct: 771  TQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMRGIDIQLSSSVCSMLLPSP 830

Query: 658  LSTVDLSSLGFLFTHLEFSMSSWESDEVQIISTPSSSIKERASLENVVRVGTRLSPFDHR 479
             STVDL  LG LFTHL++SM++WESDEVQ I TP + I ER  +  +      + P   +
Sbjct: 831  FSTVDLRGLGLLFTHLDYSMAAWESDEVQTIETPVTLIMERTDMAEL----EVIRPHKCQ 886

Query: 478  KRTHGSGIFEEIQKALWEERRKEAKTRAASIAWWNSLQCRKKPMYGTNLIEVATIKHPIF 299
            K+  G+ IFEEIQ A+WEER K+ K  AA+IAWWNSL+C+K+P+Y T L ++  ++HP+ 
Sbjct: 887  KKLQGTNIFEEIQWAIWEERLKQTKEHAAAIAWWNSLRCKKRPIYSTTLRDLVALRHPVN 946

Query: 298  DIHCQKSNPSCYMNFSSKLADIVLSPVERFNRIIKLVECFMFAIPAARAPSPACWCSKTE 119
            DIH  K+NP  Y+ +SSKLADIVLSPVERF ++  +VE FMFAIPAARAPSP CWCS +E
Sbjct: 947  DIHQVKANPVSYL-YSSKLADIVLSPVERFQKMTDVVESFMFAIPAARAPSPVCWCSTSE 1005

Query: 118  APVFLHPSYKTKCTEIVGPLLSPVRPAIVRRQVYFPDRR 2
              VFLHPSYK KC+E++ PLLSP+RPAIVRRQVYFPDRR
Sbjct: 1006 TSVFLHPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRR 1044


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score = 1278 bits (3308), Expect = 0.0
 Identities = 672/1067 (62%), Positives = 794/1067 (74%), Gaps = 22/1067 (2%)
 Frame = -2

Query: 3136 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 2960
            MASKGPRS++DHE+RA+RQKALEAPR+ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 2959 KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 2780
            KKVA+RASK  LD ATRGEKK+KEEEQRLRKVALNISKDVKKFW KIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 2779 EKKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPCTPICPDSAVDQPNGEDIEDGTELV 2600
            EKKKKALDKQL+FLLGQTERYSTMLAENL D PY       +++ +       +D  +++
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLGD-PYKSAE---NNSAEHRKSIHCKDVHDVI 176

Query: 2599 ESPEHCENM-------DIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEELEALQDEM 2441
              P+  + +       D D                     EALIT +ERQEEL AL+DEM
Sbjct: 177  NEPKEADVVEYQSDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDEM 236

Query: 2440 DIPLEELLKRYNSDK---VSMEESPLNGENVAEPIQV---EENLGKGNH--CFGGGETDT 2285
            D+P++ELLKRY  +K   V    SP + E+  + ++    ++ LG  N        + DT
Sbjct: 237  DLPIQELLKRYAGEKGESVMKGSSPEHSEDGGKIVRAGDGKKGLGSENRDDLLSVSKVDT 296

Query: 2284 SNSCII-GHHSGVSNGEISLLETDKVEVDTSQSKNQLKGCEKLEKQPLV-SCSDEQEDGD 2111
            SNS ++ G     SNG+++    +  + +  QS+N  +   +   +      +DE+EDGD
Sbjct: 297  SNSSMVSGRRCDESNGDVATPTNNLSQCEDGQSENLKETPSETANEDFAYDFTDEEEDGD 356

Query: 2110 YILAADEEKDDETTMSXXXXXXXXXXXXXXXXXXXLQKESEISVEELLARYKKDFNSDED 1931
            ++L   E+KDDETT+S                   LQKES++ VEELLARYK+D + DED
Sbjct: 357  FLLVT-EDKDDETTLSEEEKMERVDTIDPKDEIALLQKESDMPVEELLARYKRDPSDDED 415

Query: 1930 ADEEPGYTSTSSEDLMDP----QAMPERQASPIPEVVAEQDEPGEFKQISEPDAKMDEVE 1763
             + E  Y S  SE   D      A  +  A P+ E +   +      Q  E   +     
Sbjct: 416  GEYESDYASALSEKHSDSPVHQDAGQKDPAIPMDEDIKSGEHLAATIQFQEEQRESPREN 475

Query: 1762 HEMKSDEGKXXXXXXXXXXXXXXXAQPTGNTFSTMKVRTASPFLLKHSLREYQHIGLDWL 1583
             E +  E                 AQPTGNTFST  VRT  PFLLK+SLREYQHIGLDWL
Sbjct: 476  LEKRESED-----IIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWL 530

Query: 1582 VTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKW 1403
            VTMYEKRLNGILADEMGLGKTIMTISLLAHLAC+KGIWGPHLIVVPTSVMLNWETEFLKW
Sbjct: 531  VTMYEKRLNGILADEMGLGKTIMTISLLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKW 590

Query: 1402 CPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFKRKKWKYLILDEAH 1223
            CPAFKILTYFGSAKERK KRQGW+KPN FHVCITTYRLVIQDSK FKRKKWKYLILDEAH
Sbjct: 591  CPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAH 650

Query: 1222 LIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSN 1043
            LIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+FQSHQEFKDWFSN
Sbjct: 651  LIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSN 710

Query: 1042 PISVMVEGQESVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHVIYCRLSRRQRNLY 863
            PIS MV+G+E +NKEV+DRLHNVLRPF+LRRLKRDVEKQLP K EHVIYCRLS+RQRNLY
Sbjct: 711  PISGMVDGEEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLY 770

Query: 862  EDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIISSFDMGGIDMQLSSSI 683
            EDFIASSETQATLAS NFFGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM GID+QLSSS+
Sbjct: 771  EDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIDIQLSSSV 830

Query: 682  CNMLFSGPLSTVDLSSLGFLFTHLEFSMSSWESDEVQIISTPSSSIKERASLENVVRVGT 503
            C++L   P STVDL  LG LFTHL+ SM++WESDEVQ I TP++ I ER  +  +     
Sbjct: 831  CSILLPSPFSTVDLRGLGLLFTHLD-SMAAWESDEVQTIETPATLIMERTDMTEL----E 885

Query: 502  RLSPFDHRKRTHGSGIFEEIQKALWEERRKEAKTRAASIAWWNSLQCRKKPMYGTNLIEV 323
             + P   +K+  G+ IFEEIQ+A+WEER KEAK RAA+IAWWNSL+C+++P+Y T L ++
Sbjct: 886  VIRPQKCQKKLQGTNIFEEIQRAIWEERLKEAKERAAAIAWWNSLRCKRRPIYSTTLRDL 945

Query: 322  ATIKHPIFDIHCQKSNPSCYMNFSSKLADIVLSPVERFNRIIKLVECFMFAIPAARAPSP 143
             T++HP++DIH  K++P  Y+ +SSKLADIVLSPVERF ++  +VE FMF+IPAARAPSP
Sbjct: 946  VTLRHPVYDIHQVKADPVSYL-YSSKLADIVLSPVERFQKMTDVVESFMFSIPAARAPSP 1004

Query: 142  ACWCSKTEAPVFLHPSYKTKCTEIVGPLLSPVRPAIVRRQVYFPDRR 2
             CWCS +E  VFLHPSYK KC+E++ PLL+P+RPAIVRRQVYFPDRR
Sbjct: 1005 VCWCSTSETNVFLHPSYKQKCSEVLLPLLAPIRPAIVRRQVYFPDRR 1051


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score = 1272 bits (3291), Expect = 0.0
 Identities = 669/1031 (64%), Positives = 783/1031 (75%), Gaps = 5/1031 (0%)
 Frame = -2

Query: 3079 KALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALAKKVAIRASKNALDPATRGE 2903
            +ALEAP++ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA AKKVA+RASK  LD ATR E
Sbjct: 9    EALEAPKELRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATREE 68

Query: 2902 KKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVEEKKKKALDKQLDFLLGQTE 2723
            +K+KEEEQR+RKVALNISKDVKKFWIKIEKLVLYKHQ+E++EKKKKALDKQL+FLLGQTE
Sbjct: 69   RKLKEEEQRMRKVALNISKDVKKFWIKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTE 128

Query: 2722 RYSTMLAENLVDMPYPCTPICPDSAVDQPNGE--DIEDGTELVESPEHCENMDIDGXXXX 2549
            RYSTMLAENL D       I    ++    G   D ++  ELV+ P+  +  D D     
Sbjct: 129  RYSTMLAENLGDKSLLQHSILDQPSISYEKGHKCDTKEPAELVDDPQ-LDTADNDDDYDV 187

Query: 2548 XXXXXXXXXXXXXXXXEALITADERQEELEALQDEMDIPLEELLKRYNSDKVSMEESPLN 2369
                             ALIT +ER+EEL AL +E+DIPL ELLKRY + KVS E +P  
Sbjct: 188  QSDESEDDERTIDQDE-ALITEEERREELAALHNEIDIPLVELLKRYAALKVSRENTPER 246

Query: 2368 GENVAEPIQVEENLGKGNHCFGGGETDTSNSCIIGHHSGVSNGEISLLETDKVEVDTSQS 2189
            GEN A+ + VEE     +         +SN  ++       NG + + +   +E +  +S
Sbjct: 247  GENGAD-LSVEEGGPAESKMLIMNHVSSSNLSLLDMTD--VNGALLMKDNCLLETEMGES 303

Query: 2188 KNQLK-GCEKLEKQPLVSCSDEQEDGDYILAADEEKDDETTMSXXXXXXXXXXXXXXXXX 2012
            KNQ     +  ++  L   ++EQEDGD++L   EEKDDETT+S                 
Sbjct: 304  KNQPDTSLDPAKEHALFDFNEEQEDGDFVLVNGEEKDDETTLSEEEELEKDDPTNPKNEI 363

Query: 2011 XXLQKESEISVEELLARYKKDFNSDEDADEEPGYTSTSSEDLMDPQAMPERQASPIPEVV 1832
              LQKESE+ + ELLARY ++FN++   DE   YTS  S++L+D     + +       +
Sbjct: 364  LLLQKESEMPLIELLARYNEEFNNEVSEDESE-YTSALSDNLLDSPDKQDVELRQQDVSM 422

Query: 1831 AEQDEPGEFKQISEPDAKMDEVEHEMK-SDEGKXXXXXXXXXXXXXXXAQPTGNTFSTMK 1655
             E  EPG  K +   D  ++E E   K ++EG                AQPTGNTFST K
Sbjct: 423  DENVEPG--KSLPVLDHSVNEQERNEKIAEEGNESENRIADAAAAARSAQPTGNTFSTTK 480

Query: 1654 VRTASPFLLKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKG 1475
            VRT  PFL+K+ LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI+LLAHLACEKG
Sbjct: 481  VRTKFPFLIKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKG 540

Query: 1474 IWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTY 1295
            IWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK KRQGW+KPN FHVCITTY
Sbjct: 541  IWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTY 600

Query: 1294 RLVIQDSKAFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL 1115
            RLVIQDSK FKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL
Sbjct: 601  RLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL 660

Query: 1114 WSLMHFLMPHIFQSHQEFKDWFSNPISVMVEGQESVNKEVIDRLHNVLRPFILRRLKRDV 935
            WSLMHFLMPHIFQSHQEFK+WFSNPIS MVEGQE VNKEV+DRLHNVLRPFILRRLKRDV
Sbjct: 661  WSLMHFLMPHIFQSHQEFKEWFSNPISGMVEGQERVNKEVVDRLHNVLRPFILRRLKRDV 720

Query: 934  EKQLPGKFEHVIYCRLSRRQRNLYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPD 755
            EKQLP K EHVIYCRLS+RQRNLYEDFIASSETQATLAS +FFGMIS+IMQLRKVCNHPD
Sbjct: 721  EKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASASFFGMISIIMQLRKVCNHPD 780

Query: 754  LFEGRPIISSFDMGGIDMQLSSSICNMLFSGPLSTVDLSSLGFLFTHLEFSMSSWESDEV 575
            LFEGRPIISSFDM GID QL+SS+C+ML  GP S+VDLS LG LFTHL+F+M+SWE DE+
Sbjct: 781  LFEGRPIISSFDMIGIDFQLNSSVCSMLSPGPFSSVDLSGLGLLFTHLDFNMTSWECDEI 840

Query: 574  QIISTPSSSIKERASLENVVRVGTRLSPFDHRKRTHGSGIFEEIQKALWEERRKEAKTRA 395
              I+TPS  I+ERA+++++  +G +      RKR  G+ IFEEI+KAL+EER +EA+ RA
Sbjct: 841  NAIATPSRLIEERANIDSIEEIGPQSK---QRKRLPGTNIFEEIRKALFEERLREARERA 897

Query: 394  ASIAWWNSLQCRKKPMYGTNLIEVATIKHPIFDIHCQKSNPSCYMNFSSKLADIVLSPVE 215
            ASIAWWNSL+CRKKP+Y TNL E+ TIK+P+ DI+CQK +   Y+ +SSKLAD++LSPVE
Sbjct: 898  ASIAWWNSLRCRKKPIYSTNLQELLTIKNPVDDIYCQKVDRVSYL-YSSKLADVILSPVE 956

Query: 214  RFNRIIKLVECFMFAIPAARAPSPACWCSKTEAPVFLHPSYKTKCTEIVGPLLSPVRPAI 35
            RF+R+  LVE FMFAIPAARAP P CWCSKT + VFLHP+YK KC+E++ PLLSP+RPAI
Sbjct: 957  RFHRMTDLVESFMFAIPAARAPVPTCWCSKTGSSVFLHPTYKEKCSELLLPLLSPIRPAI 1016

Query: 34   VRRQVYFPDRR 2
            +RRQVYFPDRR
Sbjct: 1017 IRRQVYFPDRR 1027


>ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp.
            lyrata] gi|297328630|gb|EFH59049.1|
            photoperiod-independent early flowering 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 2057

 Score = 1239 bits (3205), Expect = 0.0
 Identities = 665/1080 (61%), Positives = 787/1080 (72%), Gaps = 32/1080 (2%)
 Frame = -2

Query: 3145 DVSMASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKL 2969
            D+ MASKG +SK D+++RA+R K LEAP++ RRPK HWDHVLEEM WLSKDFE+ERKWKL
Sbjct: 11   DIVMASKGGKSKPDNDSRAKRHKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKL 70

Query: 2968 ALAKKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQL 2789
            A AKKVA+RASK  LD A+R E+K+KEEEQRLRKVALNISKD+KKFW+K+EKLVLYKHQL
Sbjct: 71   AQAKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQL 130

Query: 2788 EVEEKKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPC---TPICPDSAVDQPNGED-- 2624
               EKKKKA+DKQL+FLLGQTERYSTMLAENLV+ PY     TP  P  A++  + E+  
Sbjct: 131  VRNEKKKKAMDKQLEFLLGQTERYSTMLAENLVE-PYKQGQNTPSKPLLAIESKSDEERA 189

Query: 2623 ------IEDGTELVE-SPEHCENMDIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEE 2465
                  I     L   SPE  E+ D+                          T  ERQEE
Sbjct: 190  EQIPPEINSSAGLESGSPELDEDYDLKSEDETEDDEDTIEEDEKH------FTKRERQEE 243

Query: 2464 LEALQDEMDIPLEELLKRYNSDKVSMEESPLNGENVAEPIQV-----------EENL--- 2327
            LEALQ+E+D+P+EELL+RY + +VS E SP+  ENV     V           E+NL   
Sbjct: 244  LEALQNEVDLPVEELLRRYTAGRVSRETSPVKDENVDNLASVSRETSPVKDENEDNLASV 303

Query: 2326 ----GKGNHCFGGGETDTSNSCIIGHHSGVSNGEISLLETDKVEVDTSQSKNQLKGCEKL 2159
                G+  +     E    N  +    S  S G +++ ET   +++   +   +K     
Sbjct: 304  GQDHGEDKNNLTASEETEGNPNV--RRSNDSYGHLAISETHSHDLEPGMTTASVKS---R 358

Query: 2158 EKQPLVSCSDEQEDGDYILAADEEKDDETTMSXXXXXXXXXXXXXXXXXXXLQKESEISV 1979
            ++      +DE ED D++ A  EEKDDETT++                   LQKE+E+ +
Sbjct: 359  KEDHTYDFNDELEDVDFVGATGEEKDDETTLAIEEELAKADNEDHVEEIALLQKENEMPI 418

Query: 1978 EELLARYKKDFNSDEDADEEPGYTSTSSEDLMDPQAMPERQASPIPEVVAEQDEPGEFKQ 1799
            E LLARYK+DF   + ++++  Y+   SED +       +QA    E V    +  E K 
Sbjct: 419  EVLLARYKEDFGDKDISEDDSEYSCAQSEDSIVNSDENRQQADSDNENV----DSTECKP 474

Query: 1798 ISEPDAK-MDEVEHEMKSDEGKXXXXXXXXXXXXXXXAQPTGNTFSTMKVRTASPFLLKH 1622
              EP ++ ++   HE+  D GK               AQPTG T+ST KVRT  PFLLKH
Sbjct: 475  DPEPCSENVEGTFHEITEDNGKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKH 534

Query: 1621 SLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPT 1442
            SLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI+LLAHLAC+KGIWGPHLIVVPT
Sbjct: 535  SLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPT 594

Query: 1441 SVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSKAFK 1262
            SVMLNWETEFLKWCPAFKILTYFGSAKERK KRQGWMK N FHVCITTYRLVIQDSK FK
Sbjct: 595  SVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFK 654

Query: 1261 RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHI 1082
            RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH+
Sbjct: 655  RKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHV 714

Query: 1081 FQSHQEFKDWFSNPISVMVEGQESVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKFEHV 902
            FQSHQEFKDWF NPI+ MVEGQE +NKEVIDRLHNVLRPF+LRRLKRDVEKQLP K EHV
Sbjct: 715  FQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHV 774

Query: 901  IYCRLSRRQRNLYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPIISSF 722
            I+CRLS+RQRNLYEDFIAS+ETQATL S +FFGMIS+IMQLRKVCNHPDLFEGRPI+SSF
Sbjct: 775  IFCRLSKRQRNLYEDFIASTETQATLNSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSF 834

Query: 721  DMGGIDMQLSSSICNMLFSGPLSTVDLSSLGFLFTHLEFSMSSWESDEVQIISTPSSSIK 542
            DM GID+QLSS+IC++L   P S VDL +LGFLFTHL+FSM+SWE DE++ ISTPS  IK
Sbjct: 835  DMAGIDVQLSSTICSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSELIK 894

Query: 541  ERASLENVVRVGTRLSPFDHRKRTHGSGIFEEIQKALWEERRKEAKTRAASIAWWNSLQC 362
            +R +L++ +     LS   +RK   G+ IFEEI+KA++EER KE K RAA+IAWWNSL+C
Sbjct: 895  QRVNLKDDME-AIPLS-LKNRKNLQGTNIFEEIRKAVFEERVKETKDRAAAIAWWNSLRC 952

Query: 361  RKKPMYGTNLIEVATIKHPIFDIHCQKSNPSCYMNFSSKLADIVLSPVERFNRIIKLVEC 182
            ++KP Y T+L  + TIK P+ DIH  K+N S YM +SS LADIVLSP+ERF ++I+LVE 
Sbjct: 953  QRKPTYSTSLRTLLTIKGPLDDIHHLKANCSSYM-YSSILADIVLSPIERFQQMIELVEA 1011

Query: 181  FMFAIPAARAPSPACWCSKTEAPVFLHPSYKTKCTEIVGPLLSPVRPAIVRRQVYFPDRR 2
            F F IPAAR PSPACWCSK+++PVFL PSYK K T+++ PLLSP+RPAIVRRQVYFPDRR
Sbjct: 1012 FTFVIPAARVPSPACWCSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRR 1071


>ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1|
            photoperiod independent early flowering1 [Arabidopsis
            thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1
            [Arabidopsis thaliana]
          Length = 2055

 Score = 1232 bits (3187), Expect = 0.0
 Identities = 664/1083 (61%), Positives = 787/1083 (72%), Gaps = 35/1083 (3%)
 Frame = -2

Query: 3145 DVSMASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKL 2969
            D+ MASK  +SK D+E+RA+RQK LEAP++ RRPK HWDHVLEEM WLSKDFE+ERKWKL
Sbjct: 11   DIVMASKSGKSKPDNESRAKRQKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKL 70

Query: 2968 ALAKKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQL 2789
            A AKKVA+RASK  LD A+R E+K+KEEEQRLRKVALNISKD+KKFW+K+EKLVLYKHQL
Sbjct: 71   AQAKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQL 130

Query: 2788 EVEEKKKKALDKQLDFLLGQTERYSTMLAENLVDMPY------PCTPICP-DSAVDQPNG 2630
               EKKKKA+DKQL+FLLGQTERYSTMLAENLV+ PY      P  P+   +S  D+   
Sbjct: 131  VRNEKKKKAMDKQLEFLLGQTERYSTMLAENLVE-PYKQGQNTPSKPLLTIESKSDEERA 189

Query: 2629 EDIED------GTELVESPEHCENMDIDGXXXXXXXXXXXXXXXXXXXXEALITADERQE 2468
            E I        G E   SPE  E+ D+                          T  ERQE
Sbjct: 190  EQIPPEINSSAGLES-GSPELDEDYDLKSEDETEDDEDTIEEDEKH------FTKRERQE 242

Query: 2467 ELEALQDEMDIPLEELLKRYNSDKVSMEESPLNGEN---------VAEPIQVE--ENL-- 2327
            ELEALQ+E+D+P+EELL+RY S +VS E SP+  EN         V  P++ E  +NL  
Sbjct: 243  ELEALQNEVDLPVEELLRRYTSGRVSRETSPVKDENEDNLTSVSRVTSPVKDENQDNLAS 302

Query: 2326 -----GKGNHCFGGGETDTSNSCIIGHHSGVSNGEISLLETDKVEVDTSQSKNQLKGCEK 2162
                 G+  +     E    N  +    S  S G +++ ET   +++   +   +K    
Sbjct: 303  VGQDHGEDKNNLAASEETEGNPSV--RRSNDSYGHLAISETHSHDLEPGMTTASVKS--- 357

Query: 2161 LEKQPLVSCSDEQEDGDYILAADEEKDDETTMSXXXXXXXXXXXXXXXXXXXLQKESEIS 1982
             ++      +DEQED D++LA  EEKDDE T++                   LQKESE+ 
Sbjct: 358  RKEDHTYDFNDEQEDVDFVLANGEEKDDEATLAVEEELAKADNEDHVEEIALLQKESEMP 417

Query: 1981 VEELLARYKKDFNSDEDADEEPGYTSTSSEDLMDPQAMPERQASPIPEVVAEQDEPGEFK 1802
            +E LLARYK+DF   + +++E   +   SED +       +QA        + D     +
Sbjct: 418  IEVLLARYKEDFGGKDISEDESESSFAVSEDSIVDSDENRQQAD------LDDDNVDLTE 471

Query: 1801 QISEPDAKMDEVE---HEMKSDEGKXXXXXXXXXXXXXXXAQPTGNTFSTMKVRTASPFL 1631
               +P+   + VE   HE+  D  K               AQPTG T+ST KVRT  PFL
Sbjct: 472  CKLDPEPCSENVEGTFHEVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFL 531

Query: 1630 LKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIV 1451
            LKHSLREYQHIGLDWLVTMYEK+LNGILADEMGLGKTIMTI+LLAHLAC+KGIWGPHLIV
Sbjct: 532  LKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIV 591

Query: 1450 VPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWMKPNFFHVCITTYRLVIQDSK 1271
            VPTSVMLNWETEFLKWCPAFKILTYFGSAKERK KRQGWMK N FHVCITTYRLVIQDSK
Sbjct: 592  VPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSK 651

Query: 1270 AFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 1091
             FKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM
Sbjct: 652  MFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 711

Query: 1090 PHIFQSHQEFKDWFSNPISVMVEGQESVNKEVIDRLHNVLRPFILRRLKRDVEKQLPGKF 911
            PH+FQSHQEFKDWF NPI+ MVEGQE +NKEVIDRLHNVLRPF+LRRLKRDVEKQLP K 
Sbjct: 712  PHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKH 771

Query: 910  EHVIYCRLSRRQRNLYEDFIASSETQATLASTNFFGMISVIMQLRKVCNHPDLFEGRPII 731
            EHVI+CRLS+RQRNLYEDFIAS+ETQATL S +FFGMIS+IMQLRKVCNHPDLFEGRPI+
Sbjct: 772  EHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIV 831

Query: 730  SSFDMGGIDMQLSSSICNMLFSGPLSTVDLSSLGFLFTHLEFSMSSWESDEVQIISTPSS 551
            SSFDM GID+QLSS+IC++L   P S VDL +LGFLFTHL+FSM+SWE DE++ ISTPS 
Sbjct: 832  SSFDMAGIDVQLSSTICSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSE 891

Query: 550  SIKERASLENVVRVGTRLSPFDHRKRTHGSGIFEEIQKALWEERRKEAKTRAASIAWWNS 371
             IK+R +L++ +     LSP  +RK   G+ IFEEI+KA++EER +E+K RAA+IAWWNS
Sbjct: 892  LIKQRVNLKDDLE-AIPLSP-KNRKNLQGTNIFEEIRKAVFEERIQESKDRAAAIAWWNS 949

Query: 370  LQCRKKPMYGTNLIEVATIKHPIFDIHCQKSNPSCYMNFSSKLADIVLSPVERFNRIIKL 191
            L+C++KP Y T+L  + TIK P+ D+   K+N S YM +SS LADIVLSP+ERF ++I+L
Sbjct: 950  LRCQRKPTYSTSLRTLLTIKGPLDDL---KANCSSYM-YSSILADIVLSPIERFQKMIEL 1005

Query: 190  VECFMFAIPAARAPSPACWCSKTEAPVFLHPSYKTKCTEIVGPLLSPVRPAIVRRQVYFP 11
            VE F FAIPAAR PSP CWCSK+++PVFL PSYK K T+++ PLLSP+RPAIVRRQVYFP
Sbjct: 1006 VEAFTFAIPAARVPSPTCWCSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFP 1065

Query: 10   DRR 2
            DRR
Sbjct: 1066 DRR 1068