BLASTX nr result
ID: Coptis23_contig00002833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002833
(1502 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chlorop... 427 e-117
ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chlorop... 389 e-106
ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chlorop... 389 e-106
ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago trun... 362 2e-97
ref|NP_001051041.1| Os03g0708900 [Oryza sativa Japonica Group] g... 359 1e-96
>ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
vinifera] gi|297734333|emb|CBI15580.3| unnamed protein
product [Vitis vinifera]
Length = 410
Score = 427 bits (1099), Expect = e-117
Identities = 215/395 (54%), Positives = 264/395 (66%), Gaps = 43/395 (10%)
Frame = +3
Query: 138 TASEAIDTLTDSDGSSETTSFSYSHPWPEWVSFIEKLNSNGYFDKSLLPVEDNNEGGDGV 317
T S A+DT+T +++T + HPWPEWV+FI++L + GYF ++L D +
Sbjct: 36 TCSAAVDTVT-----ADSTDSHHRHPWPEWVTFIDRLKTKGYFSEALPASADYDT----- 85
Query: 318 EADAVIGTTNRDLNKLRNASLTFSRDRFDIFKSLSREHIQTMVECGCPSLFRKAVNSAKR 497
++N ++A L F+RDRFD+FKSLSR+ IQT+VE GCP+LFRKAVNSAKR
Sbjct: 86 -----------NMNLFKDACLIFARDRFDVFKSLSRKDIQTVVEGGCPNLFRKAVNSAKR 134
Query: 498 LRAFLKLDEGDVCSACNLRGSCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEK 677
LRAF++LDEGDVCSACNLRGSCDRAY +LK+SEA+ARTVDIVR+LL YALDP+V SG EK
Sbjct: 135 LRAFVRLDEGDVCSACNLRGSCDRAYVLLKESEAAARTVDIVRILLFYALDPLVTSG-EK 193
Query: 678 PHGREQIEASARKLLSELVELSETPPDPALPKPAINPPRVSQ------------------ 803
P GRE +E SARKLLSEL+ELS+TP DPAL KPA PPR +
Sbjct: 194 PPGRELVEVSARKLLSELIELSDTPLDPALAKPAAIPPRRKEQHMNLTDDEMPQNVQMKK 253
Query: 804 -------------------------GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLE 908
G R+ +EMK+GDW CP C FMNF+RNIRCL+
Sbjct: 254 GDWICPNCNFLNFARNTQCMKCREDGPKRDSLNVIEMKKGDWTCPECNFMNFSRNIRCLK 313
Query: 909 CKADGPNRVNIDDIDKKKGDWTCPQCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPK 1088
C+A+GP RV+ DI KKGDW CPQC FMNFA T+C R C EPRPKR L PGEWECP
Sbjct: 314 CRAEGPKRVDAADIPMKKGDWNCPQCAFMNFASKTECFR--CREPRPKRQLNPGEWECPS 371
Query: 1089 CDFLNYRRNKFCLKCSCDKPKDEVAEYEDIIWKRP 1193
CDF+NYRRN CLKC+ D+PK+ YE+ +WK+P
Sbjct: 372 CDFVNYRRNTVCLKCNRDQPKEAATPYEEHVWKKP 406
>ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
sativus]
Length = 445
Score = 389 bits (1000), Expect = e-106
Identities = 205/430 (47%), Positives = 265/430 (61%), Gaps = 50/430 (11%)
Frame = +3
Query: 57 SSISKTHVLLPLPYSFISK-PLILKSYTTASEAIDTLTDSDGSS-----ETTSFSYSHPW 218
++IS+T P+ F + P S+ S + T+ DS GS + S HPW
Sbjct: 11 TAISRTTSRALSPFLFPRRLPSKFISFMKCSSS--TVLDSVGSGGADAPQPHSTLTHHPW 68
Query: 219 PEWVSFIEKLNSNGYFDKSLLPVEDNNEGGDGVEADAVIGTTNRDLNKLRNASLTFSRDR 398
PEWVSF++ L + GY + P ED G G EA D+N L++A ++F+RDR
Sbjct: 69 PEWVSFVDGLKTKGYLIEP--PSEDATGDGTGGEAATPPVIDYSDMNVLKDACVSFARDR 126
Query: 399 FDIFKSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDRAYG 578
FDIFKSLS + IQT+V+ GCP+L RKAVNSAKRLRA+++LDEGDVCS CNLRGSCDRAY
Sbjct: 127 FDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYV 186
Query: 579 ILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSETPPD 758
ILK ++ +ARTVD+ R+LL YALDP+VLSG +KP GRE +E S RKLLS+L ELSE P D
Sbjct: 187 ILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSELSEKPLD 246
Query: 759 PALPKPAINPPRVSQ-------------------------------------------GM 809
PA + PP + G
Sbjct: 247 PAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLKCNEDGP 306
Query: 810 GREPSKDVEMKRGDWICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCPQCQ 989
R D+EMK GDWICP C FMNF+RNIRC++CK +GP +VN++ + KKGDW CPQC
Sbjct: 307 KRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDWVCPQCS 366
Query: 990 FMNFARNTKCIRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDEVA-E 1166
FMNFA N KC+R C E RPKR+L GEWECP C ++N+R N C KC+ ++P+ E++ E
Sbjct: 367 FMNFASNKKCLR--CRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQEISDE 424
Query: 1167 YEDIIWKRPR 1196
YE+ +W+ PR
Sbjct: 425 YEEQLWESPR 434
>ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
sativus]
Length = 445
Score = 389 bits (1000), Expect = e-106
Identities = 205/430 (47%), Positives = 265/430 (61%), Gaps = 50/430 (11%)
Frame = +3
Query: 57 SSISKTHVLLPLPYSFISK-PLILKSYTTASEAIDTLTDSDGSS-----ETTSFSYSHPW 218
++IS+T P+ F + P S+ S + T+ DS GS + S HPW
Sbjct: 11 TAISRTTSRALSPFLFPRRLPSKFISFMKCSSS--TVLDSVGSGGADAPQPHSTLTHHPW 68
Query: 219 PEWVSFIEKLNSNGYFDKSLLPVEDNNEGGDGVEADAVIGTTNRDLNKLRNASLTFSRDR 398
PEWVSF++ L + GY + P ED G G EA D+N L++A ++F+RDR
Sbjct: 69 PEWVSFVDGLKTKGYLIEP--PSEDATGDGTGGEAATPPVIDYSDMNVLKDACVSFARDR 126
Query: 399 FDIFKSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDRAYG 578
FDIFKSLS + IQT+V+ GCP+L RKAVNSAKRLRA+++LDEGDVCS CNLRGSCDRAY
Sbjct: 127 FDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAYV 186
Query: 579 ILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSETPPD 758
ILK ++ +ARTVD+ R+LL YALDP+VLSG +KP GRE +E S RKLLS+L ELSE P D
Sbjct: 187 ILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSELSEKPID 246
Query: 759 PALPKPAINPPRVSQ-------------------------------------------GM 809
PA + PP + G
Sbjct: 247 PAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLKCNEDGP 306
Query: 810 GREPSKDVEMKRGDWICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCPQCQ 989
R D+EMK GDWICP C FMNF+RNIRC++CK +GP +VN++ + KKGDW CPQC
Sbjct: 307 KRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDWVCPQCS 366
Query: 990 FMNFARNTKCIRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDEVA-E 1166
FMNFA N KC+R C E RPKR+L GEWECP C ++N+R N C KC+ ++P+ E++ E
Sbjct: 367 FMNFASNKKCLR--CRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQEISDE 424
Query: 1167 YEDIIWKRPR 1196
YE+ +W+ PR
Sbjct: 425 YEEQLWESPR 434
>ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago truncatula]
gi|355494836|gb|AES76039.1| E3 SUMO-protein ligase RanBP2
[Medicago truncatula]
Length = 470
Score = 362 bits (928), Expect = 2e-97
Identities = 198/403 (49%), Positives = 243/403 (60%), Gaps = 51/403 (12%)
Frame = +3
Query: 93 PYSFISKPLILKSYTTASEAIDTLTDSDGSSETTSFSYSHPWPEWVSFIEKLNSNGYFDK 272
P+ F PL + T+ A T T + + E + S HPWPEW+SF+++L + GY K
Sbjct: 29 PFLFFKPPLHHHRHQTSFSAFSTSTAA--AEEESLSSTVHPWPEWISFVDRLRAKGYLSK 86
Query: 273 SLLPVEDNNEGGDGVEADAVIGTTNRDLNKLRNASLTFSRDRFDIFKSLSREHIQTMVEC 452
S +DN+ D+N L++ASL+F+RDR+D+FK LS E IQ +VE
Sbjct: 87 S---ADDNS--------------VYSDINLLKDASLSFARDRYDVFKLLSSEDIQAVVED 129
Query: 453 GCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDRAYGILKDSEASARTVDIVRML 632
GCP+ RKAVNSAKRLRA L+LDEGDVCSACNLRGSCDRAY ILK+SEA ARTVDIVR+L
Sbjct: 130 GCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEADARTVDIVRIL 189
Query: 633 LIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSE-TPPDPALP--------KPAIN 785
L YA+DP+VLSG EKP GRE IE+SARKLLS+L+ELSE +PP P LP K
Sbjct: 190 LFYAIDPLVLSGGEKPPGREVIESSARKLLSQLIELSEWSPPPPPLPAYSKSTSQKDVSK 249
Query: 786 PPRVSQGMGREPSKDVEMKR---------------------------------------G 848
+S SK+VEMK+ G
Sbjct: 250 VKPLSFKAAEMLSKNVEMKKGDWVCQKCNFMNFSRNRKCLNCEEDGPKSDDPRTFEMKEG 309
Query: 849 DWICPNCTFMNFARNIRCLECKADGPNRVN---IDDIDKKKGDWTCPQCQFMNFARNTKC 1019
DWIC C FMNF+RNI CLECK +GP RVN +++ KKGDWTCPQC FMNFA N KC
Sbjct: 310 DWICTECNFMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDWTCPQCGFMNFASNVKC 369
Query: 1020 IRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKP 1148
+ C EPRPK+ PG+W CPKCDF+N+ C +C P
Sbjct: 370 FK--CPEPRPKK--HPGDWSCPKCDFMNFASKDKCFRCQESNP 408
>ref|NP_001051041.1| Os03g0708900 [Oryza sativa Japonica Group]
gi|108710694|gb|ABF98489.1| Zn-finger in Ran binding
protein and others containing protein, expressed [Oryza
sativa Japonica Group] gi|113549512|dbj|BAF12955.1|
Os03g0708900 [Oryza sativa Japonica Group]
gi|215707047|dbj|BAG93507.1| unnamed protein product
[Oryza sativa Japonica Group] gi|218193617|gb|EEC76044.1|
hypothetical protein OsI_13224 [Oryza sativa Indica
Group] gi|222625654|gb|EEE59786.1| hypothetical protein
OsJ_12297 [Oryza sativa Japonica Group]
Length = 504
Score = 359 bits (921), Expect = 1e-96
Identities = 188/400 (47%), Positives = 248/400 (62%), Gaps = 27/400 (6%)
Frame = +3
Query: 39 LLTKTPSSISKTHVLLPLPYSFI-SKPLILKSYTTASEAIDTLTDSDGSSETTSFSYSHP 215
LL T +S LLP P + + PL+ + +A+ + + + + HP
Sbjct: 7 LLALTLTSSFLRSSLLPAPSRRLPTGPLLSLRFCSAAGDV-------ADAPAAAAAPDHP 59
Query: 216 WPEWVSFIEKLNSNGYFDKSLLPVE-DNNEGGDGVEADAVIGTT------------NRDL 356
WPEW F+EKL + GYF++ L D EG A A ++DL
Sbjct: 60 WPEWGDFLEKLRAKGYFEQPTLASRADAAEGEVAATAAAAAAAAGEDPGASADNYPSKDL 119
Query: 357 NKLRNASLTFSRDRFDIFKSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVC 536
N+L+NA L F R+RFD+ L ++ I+ +VECGCP++FRK VNSAKRLR FL++DEGD C
Sbjct: 120 NRLKNACLKFGRERFDLLSVLPKQDIRAIVECGCPNIFRKPVNSAKRLREFLQIDEGDAC 179
Query: 537 SACNLRGSCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARK 716
SAC LRGSCD+AY ++ ++E ARTVD++R+LL YA+DP LSGE +G ++ SARK
Sbjct: 180 SACKLRGSCDKAY-VIPNAEDEARTVDVMRILLNYAIDPTSLSGENSVNG--GVQESARK 236
Query: 717 LLSELVELSETPPDPALPKP-------------AINPPRVSQGMGREPSKDVEMKRGDWI 857
LLSEL LS+T DP++PKP I P+ S G GRE + + EMK+GDW+
Sbjct: 237 LLSELTMLSDTTIDPSIPKPVFQTSSKTKTFDKGIAKPKFSAGKGRE-TTETEMKKGDWL 295
Query: 858 CPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCPQCQFMNFARNTKCIRPHCG 1037
CPNC F+NFARN CLECKADGP ++ + K GDW CPQC FMNFARN C + C
Sbjct: 296 CPNCNFLNFARNRHCLECKADGPKKIETATTEMKTGDWICPQCHFMNFARNKMCFK--CE 353
Query: 1038 EPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDE 1157
E RPKR L PGEWECP C F+N+RRNK CLKC + P+++
Sbjct: 354 ESRPKRQLIPGEWECPSCSFVNFRRNKVCLKCKHEGPEND 393