BLASTX nr result

ID: Coptis23_contig00002832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002832
         (2359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   969   0.0  
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   960   0.0  
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              959   0.0  
ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein lig...   941   0.0  
ref|XP_003543557.1| PREDICTED: probable E3 ubiquitin-protein lig...   931   0.0  

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
            vinifera]
          Length = 652

 Score =  969 bits (2506), Expect = 0.0
 Identities = 455/587 (77%), Positives = 497/587 (84%), Gaps = 5/587 (0%)
 Frame = -2

Query: 2172 MDSEDDMHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXS-HHRQQKNYTV 1999
            M+SEDDMHDAND +S DDFYSGETA                          HR Q+NYT+
Sbjct: 66   MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTI 125

Query: 1998 LSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGLL 1819
            L+EADIRQ QE+DIT+ISTVLSI RVSASILLRHY WSVSKV+DEWFA+EEKVR  VGLL
Sbjct: 126  LTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLL 185

Query: 1818 EKPIVNYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLRC 1639
            EKP+V + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I DGPGCLMLRC
Sbjct: 186  EKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLRC 245

Query: 1638 PDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGSA 1459
            PDP+CGAAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDYAVDFI GS 
Sbjct: 246  PDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSG 305

Query: 1458 SYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPI 1279
            SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPI
Sbjct: 306  SYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPI 365

Query: 1278 EKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRRE 1099
            EKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG YDE E+RR+
Sbjct: 366  EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRRD 425

Query: 1098 MAKNSLERYTHYYERWATNQSSRQKAMADLQQMQSVHIEKLSDKQSTPETQLKFITDAWL 919
            MAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ+V+IEKLSDKQ  PE+QLKFIT+AWL
Sbjct: 426  MAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAWL 485

Query: 918  QIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAEG 739
            QI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+LQ YL+A+G
Sbjct: 486  QIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDADG 545

Query: 738  PSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXXX 559
            PS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT              
Sbjct: 546  PSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKAR 605

Query: 558  XXXXXXXXXXXXXSQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 427
                         S    +DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 606  GGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 652


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  960 bits (2482), Expect = 0.0
 Identities = 452/588 (76%), Positives = 494/588 (84%), Gaps = 6/588 (1%)
 Frame = -2

Query: 2172 MDSEDDMHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXSHH--RQQKNYT 2002
            M+SEDDMHDAND +S DDFYSGETA                               +NYT
Sbjct: 1    MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEGLFFPILHGFWLPFCGGLMQNYT 60

Query: 2001 VLSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGL 1822
            +L+EADIRQ QE+DIT+ISTVLSI RVSASILLRHY WSVSKV+DEWFA+EEKVR  VGL
Sbjct: 61   ILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGL 120

Query: 1821 LEKPIVNYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLR 1642
            LEKP+V + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I DGPGCLMLR
Sbjct: 121  LEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLR 180

Query: 1641 CPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGS 1462
            CPDP+CGAAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDYAVDFI GS
Sbjct: 181  CPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGS 240

Query: 1461 ASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP 1282
             SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP
Sbjct: 241  GSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP 300

Query: 1281 IEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRR 1102
            IEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG YDE E+RR
Sbjct: 301  IEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRR 360

Query: 1101 EMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQSVHIEKLSDKQSTPETQLKFITDAW 922
            +MAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ+V+IEKLSDKQ  PE+QLKFIT+AW
Sbjct: 361  DMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAW 420

Query: 921  LQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAE 742
            LQI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+LQ YL+A+
Sbjct: 421  LQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDAD 480

Query: 741  GPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXX 562
            GPS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT             
Sbjct: 481  GPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKA 540

Query: 561  XXXXXXXXXXXXXXSQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 427
                          S    +DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 541  RGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 588


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  959 bits (2478), Expect = 0.0
 Identities = 450/581 (77%), Positives = 491/581 (84%), Gaps = 5/581 (0%)
 Frame = -2

Query: 2154 MHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXS-HHRQQKNYTVLSEADI 1981
            MHDAND +S DDFYSGETA                          HR Q+NYT+L+EADI
Sbjct: 1    MHDANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTILTEADI 60

Query: 1980 RQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGLLEKPIVN 1801
            RQ QE+DIT+ISTVLSI RVSASILLRHY WSVSKV+DEWFA+EEKVR  VGLLEKP+V 
Sbjct: 61   RQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLLEKPVVQ 120

Query: 1800 YSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLRCPDPSCG 1621
            + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I DGPGCLMLRCPDP+CG
Sbjct: 121  FPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLRCPDPTCG 180

Query: 1620 AAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGSASYDVSC 1441
            AAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDYAVDFI GS SYDVSC
Sbjct: 181  AAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSC 240

Query: 1440 NCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC 1261
             C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC
Sbjct: 241  RCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC 300

Query: 1260 MHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRREMAKNSL 1081
            MHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG YDE E+RR+MAKNSL
Sbjct: 301  MHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRRDMAKNSL 360

Query: 1080 ERYTHYYERWATNQSSRQKAMADLQQMQSVHIEKLSDKQSTPETQLKFITDAWLQIIECR 901
            ERYTHYYERWATNQSSRQKA+ADLQQMQ+V+IEKLSDKQ  PE+QLKFIT+AWLQI+ECR
Sbjct: 361  ERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAWLQIVECR 420

Query: 900  RVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAEGPSQEFN 721
            RVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+LQ YL+A+GPS++FN
Sbjct: 421  RVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDADGPSKDFN 480

Query: 720  EFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXXXXXXXXX 541
            EFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT                    
Sbjct: 481  EFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKARGGRGKG 540

Query: 540  XXXXXXXSQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 427
                   S    +DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 541  TSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 581


>ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Vitis
            vinifera] gi|147800085|emb|CAN64272.1| hypothetical
            protein VITISV_008933 [Vitis vinifera]
          Length = 587

 Score =  941 bits (2431), Expect = 0.0
 Identities = 441/586 (75%), Positives = 486/586 (82%), Gaps = 4/586 (0%)
 Frame = -2

Query: 2172 MDSEDDMHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXSH-HRQQKNYTV 1999
            MDSEDDMHDANDVDS +DFYSG+TA                          HR Q NYT+
Sbjct: 1    MDSEDDMHDANDVDSLEDFYSGDTAADSDDDNDADYDFDNDSDDDADAIMLHRHQPNYTI 60

Query: 1998 LSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGLL 1819
            L E DI QHQE+DI +++ VLSI+ VSASILLRHY+WSVSKVNDEWFA+E +VR  VGLL
Sbjct: 61   LKEEDIHQHQEDDIARVAAVLSIASVSASILLRHYHWSVSKVNDEWFADESRVRKAVGLL 120

Query: 1818 EKPIVNYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLRC 1639
            E+P+V Y NAKE TCGICFE +PR  +++ ACGHPFCS+CW+GYISTSINDGPGCLMLRC
Sbjct: 121  EEPLVRYPNAKELTCGICFETYPRDMIQSAACGHPFCSTCWEGYISTSINDGPGCLMLRC 180

Query: 1638 PDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGSA 1459
            PDPSC AAVGQDMIN L SDED EKY+RYLLRSY+EDNRKTKWCPAPGC+YAV+F+ GS 
Sbjct: 181  PDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEYAVEFVAGSG 240

Query: 1458 SYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPI 1279
            SYDV+C C+YGFCWNCTEEAHRPVDC TVAKWILKNSAESENMNWILANSKPCPKCKRPI
Sbjct: 241  SYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPCPKCKRPI 300

Query: 1278 EKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRRE 1099
            EKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYE AKQEG YDETERRRE
Sbjct: 301  EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRRE 360

Query: 1098 MAKNSLERYTHYYERWATNQSSRQKAMADLQQMQSVHIEKLSDKQSTPETQLKFITDAWL 919
            MAKNSLERYTHYYERWATNQSSRQKA+ADL QMQ+V+IEKLSDKQ  PE+QLKFIT+AWL
Sbjct: 361  MAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQLKFITEAWL 420

Query: 918  QIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAEG 739
            QI+ECRRVLKWTYAYGYYLPEHE  +RQFFEYLQG+AESGLERLHQCAEK+LQ YLN +G
Sbjct: 421  QIVECRRVLKWTYAYGYYLPEHELPRRQFFEYLQGEAESGLERLHQCAEKELQTYLNVDG 480

Query: 738  PSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXXX 559
            PS +FN+FRTKLAGLTSVT+NYFENLVRALENGLSDVDS GACSRT              
Sbjct: 481  PSADFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSSKSMGGTSKARG 540

Query: 558  XXXXXXXXXXXXXSQ--EDSGSWSCEHCTYANAKSATICQMCNQQR 427
                         ++  +DS  W CEHC  ANAKSA  CQMC+Q+R
Sbjct: 541  GRGKGTTSRSSSSNKTPDDSSRWYCEHCATANAKSAYTCQMCHQRR 586


>ref|XP_003543557.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine
            max]
          Length = 589

 Score =  931 bits (2407), Expect = 0.0
 Identities = 435/588 (73%), Positives = 483/588 (82%), Gaps = 6/588 (1%)
 Frame = -2

Query: 2172 MDSEDDMHDANDVDS--DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXSHH----RQQK 2011
            MDSEDDMHDANDV+S  DDFYSGET                        S      R ++
Sbjct: 1    MDSEDDMHDANDVESLDDDFYSGETEDAPMDYYSDYDDEADDYFDDADDSDRVESRRPEQ 60

Query: 2010 NYTVLSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMD 1831
            N+T+L E DIRQ QE+DI +++ VLSI RVSASILLRHYNWSVSKV+D WFA+E++VR  
Sbjct: 61   NFTILRELDIRQRQEDDIARVAAVLSIPRVSASILLRHYNWSVSKVHDAWFADEDQVRKT 120

Query: 1830 VGLLEKPIVNYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCL 1651
            VGLLEKP+   SN +E TCGICFE +PR+R+++ ACGHP+C SCW GYI TSINDGPGCL
Sbjct: 121  VGLLEKPVFQNSNTRELTCGICFEMYPRARVESAACGHPYCYSCWAGYIGTSINDGPGCL 180

Query: 1650 MLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFI 1471
            +LRCPDPSCGAAVGQDMIN L SDEDKEKY+RYLLRSY+EDN+KTKWCPAPGC+YAV F 
Sbjct: 181  VLRCPDPSCGAAVGQDMINLLASDEDKEKYDRYLLRSYIEDNKKTKWCPAPGCEYAVTFD 240

Query: 1470 FGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKC 1291
             GS +YDVSC C+Y FCWNCTEEAHRPVDCGTV+KWILKNSAESENMNWILANSKPCPKC
Sbjct: 241  AGSGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPCPKC 300

Query: 1290 KRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETE 1111
            KRPIEKNQGCMH+TCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYE AKQEG YDETE
Sbjct: 301  KRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETE 360

Query: 1110 RRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQSVHIEKLSDKQSTPETQLKFIT 931
            RRREMAKNSLERYTHYYERWA+NQSSRQKA+ADL QMQ+VHIEKLSD Q  PE+QLKFIT
Sbjct: 361  RRREMAKNSLERYTHYYERWASNQSSRQKALADLHQMQTVHIEKLSDTQCQPESQLKFIT 420

Query: 930  DAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYL 751
            +AWLQI+ECRRVLKWTY+YGYYLPEHEHAK+QFFEYLQG+AESGLERLHQCAEK+LQ++L
Sbjct: 421  EAWLQIVECRRVLKWTYSYGYYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQLFL 480

Query: 750  NAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXX 571
            NA+GPS+EFN+FRTKLAGLTSVT+NYFENLVRALENGL+DVDS GA S            
Sbjct: 481  NADGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLADVDSNGAASSKATSSKNAAGS 540

Query: 570  XXXXXXXXXXXXXXXXXSQEDSGSWSCEHCTYANAKSATICQMCNQQR 427
                                D   WSCEHCTYAN KSAT CQMCNQQR
Sbjct: 541  SKGRGGRGKATIRTISSRMTDDNHWSCEHCTYANVKSATTCQMCNQQR 588


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