BLASTX nr result

ID: Coptis23_contig00002828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002828
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282529.1| PREDICTED: receptor protein kinase-like prot...   331   2e-88
ref|XP_002518686.1| conserved hypothetical protein [Ricinus comm...   320   5e-85
gb|AAM65927.1| unknown [Arabidopsis thaliana]                         311   2e-82
ref|NP_567960.1| uncharacterized protein [Arabidopsis thaliana] ...   310   3e-82
ref|XP_004136956.1| PREDICTED: probable carbohydrate esterase At...   310   5e-82

>ref|XP_002282529.1| PREDICTED: receptor protein kinase-like protein At4g34220-like [Vitis
            vinifera]
          Length = 1004

 Score =  331 bits (848), Expect = 2e-88
 Identities = 165/241 (68%), Positives = 191/241 (79%)
 Frame = -2

Query: 770  NKQIFILSGQSNMAGRGGVTSTHPKKFDGHIPPECQPNPKTLRFNAKHHWEEAHEPLHVD 591
            +KQIFILSGQSNMAGRGGV   H  K+DG +PPEC P+   LR NA+ HWE A EPLH D
Sbjct: 767  SKQIFILSGQSNMAGRGGVNGHH--KWDGVVPPECSPDSSILRLNAQLHWESAREPLHAD 824

Query: 590  IDTKKTCGIGPGLVFANSVRAQDPTIDVIGLVPCAVGGTAMKEWERGSHLYENMVKRARD 411
            IDTKK CG+GPG+ FAN+VR +   + V+GLVPCAVGGTA+KEW RG  LYENMV RA++
Sbjct: 825  IDTKKACGVGPGMSFANAVRKR---VGVLGLVPCAVGGTAIKEWARGQPLYENMVNRAKE 881

Query: 410  SVKQGGEIKCLLWYQGESDTFSKHAAESYRVNMERLIKNVRSDLRFPLLPIIQVAIASGD 231
            SVK GGEIK LLWYQGESDT S + A+SY+ NME LI+NVR DL  P LPIIQVAIASGD
Sbjct: 882  SVKSGGEIKALLWYQGESDTSSYNDAKSYKDNMESLIQNVRQDLGSPSLPIIQVAIASGD 941

Query: 230  EAYIEKVREVQLGMEMENVVCVDAKGLELKYDHVHLTTEAQVKLGKMLADAYLKNFPSSP 51
              Y+E+VRE Q  ++  NVVCVDAKGL LK DH+HLTTEAQV+LG+MLADAYL NF   P
Sbjct: 942  SKYMERVREAQKEIDFPNVVCVDAKGLPLKEDHLHLTTEAQVRLGQMLADAYLANFAPPP 1001

Query: 50   S 48
            +
Sbjct: 1002 A 1002


>ref|XP_002518686.1| conserved hypothetical protein [Ricinus communis]
           gi|223542067|gb|EEF43611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 265

 Score =  320 bits (819), Expect = 5e-85
 Identities = 159/249 (63%), Positives = 194/249 (77%), Gaps = 9/249 (3%)
 Frame = -2

Query: 767 KQIFILSGQSNMAGRGGVTS---THPKKFDGHIPPECQPNPKTLRFNAKHHWEEAHEPLH 597
           K+IF+LSGQSNMAGRGGV      H K +DG +P EC+P+   LR  A   W  A EPLH
Sbjct: 12  KRIFLLSGQSNMAGRGGVNKHPHQHHKHWDGIVPQECKPHQDILRLTANLRWVTAQEPLH 71

Query: 596 VDIDTKKTCGIGPGLVFANSVRAQ-----DPTIDVIGLVPCAVGGTAMKEWERGSHLYEN 432
            DID+KK CG+GPG+ FANSVR Q     D   +V+GLVPCAVGGTA+KEW RG  LY+ 
Sbjct: 72  ADIDSKKVCGVGPGMSFANSVRDQGHAGGDGGGEVVGLVPCAVGGTAIKEWGRGEKLYDM 131

Query: 431 MVKRARDSVKQGGEIKCLLWYQGESDTFSKHAAESYRVNMERLIKNVRSDLRFPLLPIIQ 252
           MVKRA++SVK GGEI+CLLWYQGESDT+++H A++Y+ NME+L+ NVR DL  P LPI+Q
Sbjct: 132 MVKRAKESVKDGGEIECLLWYQGESDTYTEHDADAYQGNMEKLVANVREDLGLPSLPIVQ 191

Query: 251 VAIASGDEAYIEKVREVQLGMEMENVVCVDAKGLELKYDHVHLTTEAQVKLGKMLADAYL 72
           VAI SGDE Y+EKVRE QL M + NVVCVDAKGL+LK D++HLTT +QVKLG+MLA+AY+
Sbjct: 192 VAITSGDEKYLEKVREAQLKMNISNVVCVDAKGLQLKDDNLHLTTHSQVKLGQMLAEAYI 251

Query: 71  KNF-PSSPS 48
           K+F P SPS
Sbjct: 252 KHFAPPSPS 260


>gb|AAM65927.1| unknown [Arabidopsis thaliana]
          Length = 260

 Score =  311 bits (797), Expect = 2e-82
 Identities = 161/238 (67%), Positives = 181/238 (76%), Gaps = 4/238 (1%)
 Frame = -2

Query: 764 QIFILSGQSNMAGRGGVTSTHPKK---FDGHIPPECQPNPKTLRFNAKHHWEEAHEPLHV 594
           QIFILSGQSNMAGRGGV   H      +D  +PPEC PN   LR +A   WEEAHEPLHV
Sbjct: 23  QIFILSGQSNMAGRGGVVKDHHHNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHV 82

Query: 593 DIDTKKTCGIGPGLVFANSVRAQDPTID-VIGLVPCAVGGTAMKEWERGSHLYENMVKRA 417
           DIDT K CG+GPG+ FAN+V+ +  T   VIGLVPCA GGTA+KEWERGSHLYE MVKR 
Sbjct: 83  DIDTGKVCGVGPGMAFANAVKNRVETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRT 142

Query: 416 RDSVKQGGEIKCLLWYQGESDTFSKHAAESYRVNMERLIKNVRSDLRFPLLPIIQVAIAS 237
            +S K GGEIK +LWYQGESD    H AESY  NM+RLIKN+R DL  P LPIIQVAIAS
Sbjct: 143 EESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIAS 202

Query: 236 GDEAYIEKVREVQLGMEMENVVCVDAKGLELKYDHVHLTTEAQVKLGKMLADAYLKNF 63
           G   YI+KVRE QLG+++ NVVCVDAKGL LK D++HLTTEAQV+LG  LA AYL NF
Sbjct: 203 GG-GYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNF 259


>ref|NP_567960.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30689964|ref|NP_849493.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|109940187|sp|Q8L9J9.2|CAES_ARATH RecName:
           Full=Probable carbohydrate esterase At4g34215
           gi|332660941|gb|AEE86341.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332660942|gb|AEE86342.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 260

 Score =  310 bits (795), Expect = 3e-82
 Identities = 161/238 (67%), Positives = 181/238 (76%), Gaps = 4/238 (1%)
 Frame = -2

Query: 764 QIFILSGQSNMAGRGGVTSTHPKK---FDGHIPPECQPNPKTLRFNAKHHWEEAHEPLHV 594
           QIFILSGQSNMAGRGGV   H      +D  +PPEC PN   LR +A   WEEAHEPLHV
Sbjct: 23  QIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHV 82

Query: 593 DIDTKKTCGIGPGLVFANSVRAQDPTID-VIGLVPCAVGGTAMKEWERGSHLYENMVKRA 417
           DIDT K CG+GPG+ FAN+V+ +  T   VIGLVPCA GGTA+KEWERGSHLYE MVKR 
Sbjct: 83  DIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRT 142

Query: 416 RDSVKQGGEIKCLLWYQGESDTFSKHAAESYRVNMERLIKNVRSDLRFPLLPIIQVAIAS 237
            +S K GGEIK +LWYQGESD    H AESY  NM+RLIKN+R DL  P LPIIQVAIAS
Sbjct: 143 EESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIAS 202

Query: 236 GDEAYIEKVREVQLGMEMENVVCVDAKGLELKYDHVHLTTEAQVKLGKMLADAYLKNF 63
           G   YI+KVRE QLG+++ NVVCVDAKGL LK D++HLTTEAQV+LG  LA AYL NF
Sbjct: 203 GG-GYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNF 259


>ref|XP_004136956.1| PREDICTED: probable carbohydrate esterase At4g34215-like [Cucumis
           sativus]
          Length = 260

 Score =  310 bits (793), Expect = 5e-82
 Identities = 154/236 (65%), Positives = 186/236 (78%)
 Frame = -2

Query: 770 NKQIFILSGQSNMAGRGGVTSTHPKKFDGHIPPECQPNPKTLRFNAKHHWEEAHEPLHVD 591
           NKQIFILSGQSNMAGRGGV     +++DG +PPE  P+P   R +AK HWE A EPLH D
Sbjct: 17  NKQIFILSGQSNMAGRGGVLKKL-RRWDGVVPPEAHPHPSIFRLSAKKHWEAACEPLHAD 75

Query: 590 IDTKKTCGIGPGLVFANSVRAQDPTIDVIGLVPCAVGGTAMKEWERGSHLYENMVKRARD 411
           IDTKKTCG+GPG+VFAN VR +   +  + LVPCAVGGTA++EW RG  LYE MVKRARD
Sbjct: 76  IDTKKTCGVGPGMVFANGVRER---VGTVALVPCAVGGTAIREWARGEKLYEEMVKRARD 132

Query: 410 SVKQGGEIKCLLWYQGESDTFSKHAAESYRVNMERLIKNVRSDLRFPLLPIIQVAIASGD 231
           SVK GGEIK +LW+QGESDT ++H A++Y+ NME L+ NVR DL  P LPIIQVA+ASG 
Sbjct: 133 SVKGGGEIKAILWFQGESDTSTEHDADAYQGNMEALVANVRRDLALPSLPIIQVALASGL 192

Query: 230 EAYIEKVREVQLGMEMENVVCVDAKGLELKYDHVHLTTEAQVKLGKMLADAYLKNF 63
           + Y +KVRE QLGM+MEN+VCVDA GLEL+ D++HLTT +QV LG+ML DAY  +F
Sbjct: 193 K-YTDKVREAQLGMKMENLVCVDAMGLELQEDNLHLTTHSQVILGQMLVDAYFTHF 247


Top