BLASTX nr result
ID: Coptis23_contig00002824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002824
(944 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516668.1| transcription factor, putative [Ricinus comm... 96 3e-26
ref|XP_003544049.1| PREDICTED: uncharacterized protein LOC100800... 98 4e-26
ref|XP_002886476.1| predicted protein [Arabidopsis lyrata subsp.... 87 1e-25
gb|AAF70852.1|AC003113_19 F24O1.3 [Arabidopsis thaliana] 86 1e-25
ref|NP_176421.1| transcription factor jumonji domain-containing ... 86 1e-25
>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
gi|223544163|gb|EEF45687.1| transcription factor,
putative [Ricinus communis]
Length = 939
Score = 95.5 bits (236), Expect(2) = 3e-26
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = +2
Query: 542 WLPRRPYQ--WPEMLKLKDWPSSSSFEDRLPRYGVEFIVALPFSDYTHPKSGILYTATKL 715
+L R Y+ WPEMLKLKDWP S+SFE+ LPR+G EFI LPFS+YTHPKSG+L AT+L
Sbjct: 562 YLEGRKYRNGWPEMLKLKDWPPSNSFEECLPRHGAEFIAMLPFSEYTHPKSGLLNLATRL 621
Query: 716 PEILWKTDLGTK 751
P +L K DLG K
Sbjct: 622 PAVL-KPDLGPK 632
Score = 50.1 bits (118), Expect(2) = 3e-26
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 739 LGDQKYIVYWFPEELGRGDSITKLHCDMSDA 831
LG + YI Y EELGRGDS+TKLHCD+SDA
Sbjct: 629 LGPKTYIAYGSKEELGRGDSVTKLHCDISDA 659
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 314 CKACLRANIV-VSRCEEPNPNDKLQQLLYLLHGVFPLLPTSCLEQDSEIEMEAESQGLER 490
C+ CL+ + V + E + N KLQ LYLL+ PLL EQ SE+E+E +G++
Sbjct: 214 CRLCLKEDAVALVGNTEADKNTKLQNFLYLLYKTLPLLRHIQQEQSSELEVEERIRGVQL 273
Query: 491 AEVNIRRIKLDEDERQY 541
E ++ + LD+D+R Y
Sbjct: 274 TEEDVPKSVLDDDDRLY 290
Score = 35.8 bits (81), Expect(2) = 2e-09
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +1
Query: 250 YPEKTKEQIENACPVCCGN*N 312
YPEKT EQIE ACP C GN N
Sbjct: 193 YPEKTWEQIEIACPFCRGNCN 213
>ref|XP_003544049.1| PREDICTED: uncharacterized protein LOC100800662 [Glycine max]
Length = 1833
Score = 98.2 bits (243), Expect(2) = 4e-26
Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = +2
Query: 542 WLPRRPYQ--WPEMLKLKDWPSSSSFEDRLPRYGVEFIVALPFSDYTHPKSGILYTATKL 715
+L R Y+ WPEMLKLKDWP S+SFE+ LPR+G EFI LPFSDYTHPKSG+L ATKL
Sbjct: 1350 YLEGRRYRNGWPEMLKLKDWPPSNSFEECLPRHGAEFIAMLPFSDYTHPKSGVLNLATKL 1409
Query: 716 PEILWKTDLGTK 751
P +L K DLG K
Sbjct: 1410 PAVL-KPDLGPK 1420
Score = 47.0 bits (110), Expect(2) = 4e-26
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 739 LGDQKYIVYWFPEELGRGDSITKLHCDMSDA 831
LG + YI Y EEL RGDS+TKLHCD+SDA
Sbjct: 1417 LGPKTYIAYGSLEELSRGDSVTKLHCDISDA 1447
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +2
Query: 314 CKACLRAN--IVVSRCEEPNPNDKLQQLLYLLHGVFPLLPTSCLEQDSEIEMEAESQGLE 487
C+ CL+ V++ E + + KLQ+L YLL V PLL + LEQ SE+++EA QG +
Sbjct: 1042 CRLCLKEEDISVLTGTGEADTDVKLQKLFYLLDKVLPLLQSIQLEQISELKVEARMQGSQ 1101
Query: 488 RAEVNIRRIKLDEDERQY 541
E + +D+D+R Y
Sbjct: 1102 LLEEEVVHSLIDDDDRVY 1119
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 250 YPEKTKEQIENACPVCCGN*NLQGLLASE 336
YP+KT+E+IE +CP C GN N + L E
Sbjct: 1021 YPDKTREEIEVSCPFCLGNCNCRLCLKEE 1049
>ref|XP_002886476.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332317|gb|EFH62735.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 931
Score = 86.7 bits (213), Expect(2) = 1e-25
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2
Query: 566 WPEMLKLKDWPSSSSFEDRLPRYGVEFIVALPFSDYTHPKSGILYTATKLPEILWKTDLG 745
WPEMLKLKDWP S FED LPR+ EFI ALPF +Y++P++GIL ATKLPE K DLG
Sbjct: 604 WPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSNPRTGILNIATKLPEGFIKPDLG 663
Query: 746 TK 751
K
Sbjct: 664 PK 665
Score = 56.6 bits (135), Expect(2) = 1e-25
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 724 FVEDGLGDQKYIVYWFPEELGRGDSITKLHCDMSDA 831
F++ LG + YI Y P+ELGRGDS+TKLHCDMSDA
Sbjct: 657 FIKPDLGPKTYIAYGIPDELGRGDSMTKLHCDMSDA 692
>gb|AAF70852.1|AC003113_19 F24O1.3 [Arabidopsis thaliana]
Length = 906
Score = 85.9 bits (211), Expect(2) = 1e-25
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +2
Query: 566 WPEMLKLKDWPSSSSFEDRLPRYGVEFIVALPFSDYTHPKSGILYTATKLPEILWKTDLG 745
WPEMLKLKDWP S FED LPR+ EFI ALPF +Y+ P++GIL ATKLPE K DLG
Sbjct: 594 WPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILNIATKLPEGFIKPDLG 653
Query: 746 TK 751
K
Sbjct: 654 PK 655
Score = 57.4 bits (137), Expect(2) = 1e-25
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 724 FVEDGLGDQKYIVYWFPEELGRGDSITKLHCDMSDA 831
F++ LG + YI Y P+ELGRGDS+TKLHCDMSDA
Sbjct: 647 FIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDA 682
>ref|NP_176421.1| transcription factor jumonji domain-containing protein [Arabidopsis
thaliana] gi|225898042|dbj|BAH30353.1| hypothetical
protein [Arabidopsis thaliana]
gi|332195831|gb|AEE33952.1| transcription factor jumonji
domain-containing protein [Arabidopsis thaliana]
Length = 883
Score = 85.9 bits (211), Expect(2) = 1e-25
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +2
Query: 566 WPEMLKLKDWPSSSSFEDRLPRYGVEFIVALPFSDYTHPKSGILYTATKLPEILWKTDLG 745
WPEMLKLKDWP S FED LPR+ EFI ALPF +Y+ P++GIL ATKLPE K DLG
Sbjct: 594 WPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILNIATKLPEGFIKPDLG 653
Query: 746 TK 751
K
Sbjct: 654 PK 655
Score = 57.4 bits (137), Expect(2) = 1e-25
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 724 FVEDGLGDQKYIVYWFPEELGRGDSITKLHCDMSDA 831
F++ LG + YI Y P+ELGRGDS+TKLHCDMSDA
Sbjct: 647 FIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDA 682