BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002800
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   392   e-106
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...   373   e-101
ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46...   371   e-100

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  392 bits (1006), Expect = e-106
 Identities = 194/244 (79%), Positives = 215/244 (88%)
 Frame = +1

Query: 88  SMEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEK 267
           SME+ R DGRT NQLRPL CSRN+LNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEK
Sbjct: 2   SMEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEK 61

Query: 268 ASIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSA 447
           A IEV+WKPKTGQIGK EKEYE+IL+RTL+SICLL +NPNTTTSII+QVV+DDGALLP A
Sbjct: 62  ACIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCA 121

Query: 448 INAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASIL 627
           INAA AALVDA IPLKHLAVAI C L ESG V+LDPTK+EEQKMKAFAYLVFPNS  SI+
Sbjct: 122 INAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISII 181

Query: 628 PEASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDL 807
           PE S  +EGEL+EHG+ITSVTHGVMSVD YLHCLERG++AS KMS FLRRSLQS+ PND 
Sbjct: 182 PEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQAPNDS 241

Query: 808 PKTG 819
            + G
Sbjct: 242 SRAG 245


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  390 bits (1002), Expect = e-106
 Identities = 193/243 (79%), Positives = 214/243 (88%)
 Frame = +1

Query: 91  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 270
           ME+ R DGRT NQLRPL CSRN+LNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA
Sbjct: 1   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 271 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAI 450
            IEV+WKPKTGQIGK EKEYE+IL+RTL+SICLL +NPNTTTSII+QVV+DDGALLP AI
Sbjct: 61  CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 120

Query: 451 NAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILP 630
           NAA AALVDA IPLKHLAVAI C L ESG V+LDPTK+EEQKMKAFAYLVFPNS  SI+P
Sbjct: 121 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIP 180

Query: 631 EASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLP 810
           E S  +EGEL+EHG+ITSVTHGVMSVD YLHCLERG++AS KMS FLRRSLQS+ PND  
Sbjct: 181 EGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQAPNDSS 240

Query: 811 KTG 819
           + G
Sbjct: 241 RAG 243


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  381 bits (979), Expect = e-103
 Identities = 190/241 (78%), Positives = 214/241 (88%)
 Frame = +1

Query: 91  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 270
           ME DR DGR+P+QLRPL+C+RNVL+RAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA
Sbjct: 1   MESDRDDGRSPSQLRPLSCARNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 271 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAI 450
            IEVIWKPKTGQIGK EKE+EMIL+RTLQSIC+LT+NPNTTTSII+QVVNDDGALL  AI
Sbjct: 61  CIEVIWKPKTGQIGKLEKEFEMILKRTLQSICILTLNPNTTTSIIVQVVNDDGALLVCAI 120

Query: 451 NAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILP 630
           NAA AALVDAGIP+KHLAVAI C L E G V+LDPTKLEEQKM+ F YLVFPNSV S+LP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAEGGYVILDPTKLEEQKMRGFTYLVFPNSVVSVLP 180

Query: 631 EASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLP 810
           E S  VEGE +EHG+ITSVTHGVMSV+ YL CLERGR+AS K+SDFLRRSLQS++P+D  
Sbjct: 181 EGSSHVEGEPMEHGIITSVTHGVMSVEEYLKCLERGRAASTKLSDFLRRSLQSQLPSDSS 240

Query: 811 K 813
           K
Sbjct: 241 K 241


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  373 bits (957), Expect = e-101
 Identities = 186/243 (76%), Positives = 210/243 (86%)
 Frame = +1

Query: 91  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 270
           ME+DR DGRTPNQLRPL CS NVLNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 271 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAI 450
           SIEVIWKPKTGQIGK E+E EMIL+RTLQSIC+LT NPNTTTSII+QV++DDGALLP AI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 451 NAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILP 630
           NA+ AALVDAGIPLKHLAVAISC L E+G V+LDPTK+EE+KMKA  +LVFPN+  S++P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 631 EASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLP 810
           E S Q  GE LEHG+ITSVT G MSVD Y+HCLERGR+A+ KMS FLRRSLQ ++P D  
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240

Query: 811 KTG 819
           K G
Sbjct: 241 KAG 243


>ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  371 bits (952), Expect = e-100
 Identities = 185/243 (76%), Positives = 210/243 (86%)
 Frame = +1

Query: 91  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 270
           ME+DR DGRTPNQLRPL CS NVLNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 271 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAI 450
           SIEVIWKPKTGQIGK E+E EMIL+RTLQSIC+LT NPNTTTSII+QV++DDGALLP AI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 451 NAASAALVDAGIPLKHLAVAISCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILP 630
           NA+ AALVDAGIPLKHLAVAISC L E+G V+LDPTK+EE+KMKA  +LVFPN+  S++P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 631 EASLQVEGELLEHGMITSVTHGVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLP 810
           E S Q  GE LEHG+ITSVT G MSVD Y+HCLERGR+A+ KMS FLRRSLQ ++P +  
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMNSS 240

Query: 811 KTG 819
           K G
Sbjct: 241 KAG 243