BLASTX nr result

ID: Coptis23_contig00002794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002794
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620...   332   7e-89
ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620...   326   7e-87
ref|XP_003597861.1| hypothetical protein MTR_2g103370 [Medicago ...   311   2e-82
ref|XP_003543674.1| PREDICTED: uncharacterized protein At2g41620...   311   2e-82
ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82

>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
            gi|449494745|ref|XP_004159635.1| PREDICTED:
            uncharacterized protein At2g41620-like [Cucumis sativus]
          Length = 863

 Score =  332 bits (852), Expect = 7e-89
 Identities = 167/259 (64%), Positives = 198/259 (76%)
 Frame = -3

Query: 1001 SWTGEANKHQQRQKLSMLKQLLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLTDRKDQQQF 822
            SW+   +  QQRQ+  MLKQLLTE                          +TD K +QQF
Sbjct: 605  SWSSRGSMDQQRQRTLMLKQLLTELLLRDGGIYLLLGARGAGEEGELRRFMTDMKSRQQF 664

Query: 821  LLEAARQCQEAGLSEKSVELHKRIGAFSMALETINKYLSEAICALARGRLDGESQTAALI 642
            LLEAARQCQEAGL +KS+E+HKR+GAFSMAL+TIN+ LSEAICAL+RGRLDGES+TA LI
Sbjct: 665  LLEAARQCQEAGLYDKSIEIHKRVGAFSMALDTINRCLSEAICALSRGRLDGESRTAGLI 724

Query: 641  HSGNDILETYKYSGEASVQEREQILEYQTVLRQLEAILSIHKLARAGQCTDALKEVTKLS 462
            HSGNDILE YKY  E S+QERE ++E QTVLRQLEA+LSIHKLAR G   DAL+E+ ++ 
Sbjct: 725  HSGNDILEAYKYCREISLQEREYVMEQQTVLRQLEAVLSIHKLARLGHHLDALREIARIP 784

Query: 461  FLPLDPRSPDIMTYEFQRLSPYVQACVPDLLKVALSCLDNMTDSDGVLRALRTKIGNLVA 282
            FLPLDPR PD+ +  FQ LSP++QACVPDLLKVAL+CLDN+TDSDG LRALR KI N +A
Sbjct: 785  FLPLDPRGPDMASDVFQNLSPHIQACVPDLLKVALTCLDNVTDSDGSLRALRAKIANFIA 844

Query: 281  NNMTSNWPRDLYEKVARSL 225
            NN+  NWPRDLYEKVA++L
Sbjct: 845  NNLNRNWPRDLYEKVAQTL 863


>ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera]
            gi|297739625|emb|CBI29807.3| unnamed protein product
            [Vitis vinifera]
          Length = 863

 Score =  326 bits (835), Expect = 7e-87
 Identities = 171/259 (66%), Positives = 196/259 (75%)
 Frame = -3

Query: 1001 SWTGEANKHQQRQKLSMLKQLLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLTDRKDQQQF 822
            SWTG  N  QQ Q+  MLKQLLTE                          LTD K +QQF
Sbjct: 605  SWTGRGNIDQQWQRNLMLKQLLTELLLRDGGIYLLLGPRGAGEEGELARFLTDVKARQQF 664

Query: 821  LLEAARQCQEAGLSEKSVELHKRIGAFSMALETINKYLSEAICALARGRLDGESQTAALI 642
            LLEA+RQCQ+AGL ++S+E+ KRIGAFSMAL+TINK LSEA+CALARGRLDGES+TA LI
Sbjct: 665  LLEASRQCQDAGLYDQSIEIQKRIGAFSMALDTINKCLSEAVCALARGRLDGESRTAGLI 724

Query: 641  HSGNDILETYKYSGEASVQEREQILEYQTVLRQLEAILSIHKLARAGQCTDALKEVTKLS 462
             SGN+ILETYKY  E S+QERE ++E QTVLR+LEAILSIHKLAR G   DAL+EV KL 
Sbjct: 725  QSGNEILETYKYFPEVSLQEREHVMEQQTVLRELEAILSIHKLARVGHYLDALREVAKLP 784

Query: 461  FLPLDPRSPDIMTYEFQRLSPYVQACVPDLLKVALSCLDNMTDSDGVLRALRTKIGNLVA 282
            FLPLDPR+PD     FQ LSP+VQACVPDLLK+ALSCLD +TD+DG LRALRTKI N +A
Sbjct: 785  FLPLDPRAPDTTPDVFQNLSPHVQACVPDLLKIALSCLDYVTDTDGSLRALRTKIANFLA 844

Query: 281  NNMTSNWPRDLYEKVARSL 225
            NN+  NWPRDLYEKVAR+L
Sbjct: 845  NNLNRNWPRDLYEKVARTL 863


>ref|XP_003597861.1| hypothetical protein MTR_2g103370 [Medicago truncatula]
            gi|87162600|gb|ABD28395.1| Nucleoporin interacting
            component; Protein prenyltransferase [Medicago
            truncatula] gi|355486909|gb|AES68112.1| hypothetical
            protein MTR_2g103370 [Medicago truncatula]
          Length = 859

 Score =  311 bits (797), Expect = 2e-82
 Identities = 159/259 (61%), Positives = 190/259 (73%)
 Frame = -3

Query: 1001 SWTGEANKHQQRQKLSMLKQLLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLTDRKDQQQF 822
            SWTG  N  QQRQ+  MLKQLLTE                          + D   +QQF
Sbjct: 601  SWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGAGEEGELGRFVADPNARQQF 660

Query: 821  LLEAARQCQEAGLSEKSVELHKRIGAFSMALETINKYLSEAICALARGRLDGESQTAALI 642
            L+EAA QCQE+G+ +KS+E+ KR+G+FSMAL+TINK LSEAIC+L RGRLDGES+TA LI
Sbjct: 661  LIEAACQCQESGMYDKSIEIQKRVGSFSMALDTINKCLSEAICSLFRGRLDGESRTAGLI 720

Query: 641  HSGNDILETYKYSGEASVQEREQILEYQTVLRQLEAILSIHKLARAGQCTDALKEVTKLS 462
            HSGN+ILETY Y  + S QEREQ+ E QT+LRQLE+ILSIHKL+R G   DAL+EV KL 
Sbjct: 721  HSGNEILETYTYYPDVSHQEREQVFEQQTILRQLESILSIHKLSRLGNHVDALREVAKLP 780

Query: 461  FLPLDPRSPDIMTYEFQRLSPYVQACVPDLLKVALSCLDNMTDSDGVLRALRTKIGNLVA 282
            FLPLDPR PD     F+ LSP+VQAC+PDLLKVAL+CLDN+TDSDG LRALR KI + +A
Sbjct: 781  FLPLDPRGPDTAVDVFENLSPHVQACIPDLLKVALTCLDNVTDSDGSLRALRAKISSFIA 840

Query: 281  NNMTSNWPRDLYEKVARSL 225
            NN+  NWPRDLYE+VA+ L
Sbjct: 841  NNVKRNWPRDLYERVAQRL 859


>ref|XP_003543674.1| PREDICTED: uncharacterized protein At2g41620-like [Glycine max]
          Length = 861

 Score =  311 bits (796), Expect = 2e-82
 Identities = 159/259 (61%), Positives = 189/259 (72%)
 Frame = -3

Query: 1001 SWTGEANKHQQRQKLSMLKQLLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLTDRKDQQQF 822
            SWTG  N  QQRQ+  M+KQLLTE                          +TD K +QQF
Sbjct: 603  SWTGRGNVDQQRQRNLMVKQLLTELLLRDGGIYLLLGARGTGEEGELGRFVTDPKARQQF 662

Query: 821  LLEAARQCQEAGLSEKSVELHKRIGAFSMALETINKYLSEAICALARGRLDGESQTAALI 642
            L+EAA QCQEAG+ +KS+E+ KR+G+FS AL+TINK LSEAICAL RGRLDGES+TA LI
Sbjct: 663  LIEAACQCQEAGMYDKSIEIQKRVGSFSTALDTINKCLSEAICALFRGRLDGESRTAGLI 722

Query: 641  HSGNDILETYKYSGEASVQEREQILEYQTVLRQLEAILSIHKLARAGQCTDALKEVTKLS 462
            HSGN+ILETY Y  +  +QERE + + QTVLRQLE+ILSIHKLAR G   DAL+EV KL 
Sbjct: 723  HSGNEILETYSYYPDVRLQEREHVFDQQTVLRQLESILSIHKLARLGHYLDALREVAKLP 782

Query: 461  FLPLDPRSPDIMTYEFQRLSPYVQACVPDLLKVALSCLDNMTDSDGVLRALRTKIGNLVA 282
            FLPLDPR PDI     + LSP+VQAC+PDLLK AL+CLDN+TDSDG LRALR KI + +A
Sbjct: 783  FLPLDPRGPDIAVDVLENLSPHVQACIPDLLKTALTCLDNVTDSDGSLRALRAKIASFIA 842

Query: 281  NNMTSNWPRDLYEKVARSL 225
            NN+  NWPRDLYE+VA+ L
Sbjct: 843  NNLRRNWPRDLYERVAQRL 861


>ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1|
            predicted protein [Populus trichocarpa]
          Length = 863

 Score =  311 bits (796), Expect = 2e-82
 Identities = 164/259 (63%), Positives = 188/259 (72%)
 Frame = -3

Query: 1001 SWTGEANKHQQRQKLSMLKQLLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLTDRKDQQQF 822
            SWTG  N  QQRQ+  MLKQLLTE                          LTD K++QQF
Sbjct: 605  SWTGRGNIDQQRQRSMMLKQLLTELLLRDGGIHLLLGPRGAGEEGELARFLTDSKERQQF 664

Query: 821  LLEAARQCQEAGLSEKSVELHKRIGAFSMALETINKYLSEAICALARGRLDGESQTAALI 642
            LLEAAR+CQEAGL EKS+E+ KR+GAFSMAL+TINK LSEAICAL+RGRLD ES TA LI
Sbjct: 665  LLEAARKCQEAGLDEKSIEIQKRVGAFSMALDTINKCLSEAICALSRGRLDSESWTAGLI 724

Query: 641  HSGNDILETYKYSGEASVQEREQILEYQTVLRQLEAILSIHKLARAGQCTDALKEVTKLS 462
            +SGN+ILET+KY    S QER  ++E +TVLRQLEA LS+HKLAR G   DAL+E+ KL 
Sbjct: 725  NSGNEILETFKYYPNESFQERGHVIEQETVLRQLEATLSVHKLARMGHYLDALRELAKLP 784

Query: 461  FLPLDPRSPDIMTYEFQRLSPYVQACVPDLLKVALSCLDNMTDSDGVLRALRTKIGNLVA 282
            FLP DPR PD+     Q LS +VQACVP LLKVAL+CLDN+TDSDG LRA+R KI   +A
Sbjct: 785  FLPFDPRVPDVTVDALQNLSLHVQACVPYLLKVALTCLDNVTDSDGSLRAMRAKITQFLA 844

Query: 281  NNMTSNWPRDLYEKVARSL 225
            NNM  NWPRDLYEKVARSL
Sbjct: 845  NNMNRNWPRDLYEKVARSL 863


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