BLASTX nr result

ID: Coptis23_contig00002788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002788
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271766.2| PREDICTED: uncharacterized protein LOC100249...   365   1e-98
ref|XP_002320390.1| predicted protein [Populus trichocarpa] gi|2...   345   1e-92
ref|XP_004140086.1| PREDICTED: uncharacterized protein LOC101220...   323   7e-86
emb|CAA65337.1| PAC [Arabidopsis thaliana]                            321   3e-85
ref|NP_182332.1| pale cress protein [Arabidopsis thaliana] gi|75...   321   3e-85

>ref|XP_002271766.2| PREDICTED: uncharacterized protein LOC100249345 [Vitis vinifera]
           gi|296086712|emb|CBI32347.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  365 bits (937), Expect = 1e-98
 Identities = 189/283 (66%), Positives = 218/283 (77%), Gaps = 1/283 (0%)
 Frame = +3

Query: 111 SPSILKSPLRSVVLK-NKSTQEKDLTGLPKEFYDDEWQAXXXXXXXXXXXXXXXXXXXXX 287
           SP   K P  + VL+ +K+ +E++L GLPKE+YDDEWQA                     
Sbjct: 33  SPFNSKPPSGAGVLRRSKNKEEQELYGLPKEYYDDEWQARQREKTKELHRRRQEEEEEEE 92

Query: 288 XXXXXXXXIGTRLQEYPEEEVRNARKLVSSFIRSXXXXXXXXXXXXXKGELTELVLMVIW 467
                   IG RL+ YPEEEV+ A+KLVSSFIRS             KGELTELVLMVIW
Sbjct: 93  RKVEEYREIGLRLKGYPEEEVKKAKKLVSSFIRSAEEVEEKIEEAAEKGELTELVLMVIW 152

Query: 468 NRLDLARRDEEKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLNLHDGFDEEGWLKEC 647
           NRLDLARRD+EKDA+RSLDLLYRRVETEILKREA+PAMRLLNDLLN+HDGFD+EGWLK+C
Sbjct: 153 NRLDLARRDDEKDAVRSLDLLYRRVETEILKREASPAMRLLNDLLNMHDGFDDEGWLKKC 212

Query: 648 RKRMVDTFPREDPFSILVPAGFDIDNHQGQIRLPSEADDILLRVDFVREVDALLQEVRPQ 827
           +K M+DTFPREDPFSILVPAGF+ID HQG++R P E DD LLRVDFVREVDALLQEVRP+
Sbjct: 213 KKCMIDTFPREDPFSILVPAGFNIDEHQGKLRPPLEVDDPLLRVDFVREVDALLQEVRPE 272

Query: 828 QDEAQAAQGLDPESIANRLKEQEKQRVIRQVEALLDLAVTLRW 956
           Q EAQ AQGLDPES+A+RLK+QEKQ+ IRQVEALLDLA+ L+W
Sbjct: 273 QSEAQNAQGLDPESVASRLKQQEKQQTIRQVEALLDLAINLKW 315


>ref|XP_002320390.1| predicted protein [Populus trichocarpa] gi|222861163|gb|EEE98705.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  345 bits (885), Expect = 1e-92
 Identities = 173/274 (63%), Positives = 204/274 (74%)
 Frame = +3

Query: 135 LRSVVLKNKSTQEKDLTGLPKEFYDDEWQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 314
           +R    K K  +E+ L G+PKE+YD+EWQA                             I
Sbjct: 40  MRKSTAKTKKGEEQLLDGMPKEYYDEEWQAQQREKTKELERLRKQEDDEEERMVENYREI 99

Query: 315 GTRLQEYPEEEVRNARKLVSSFIRSXXXXXXXXXXXXXKGELTELVLMVIWNRLDLARRD 494
           G RL+ YPEE+V+ A+KLVSSFIR+             KGELTELVLMVIWNRLDLARRD
Sbjct: 100 GIRLKGYPEEDVKKAKKLVSSFIRAEEEVEEKIEEAAEKGELTELVLMVIWNRLDLARRD 159

Query: 495 EEKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLNLHDGFDEEGWLKECRKRMVDTFP 674
           +EKDAIRSLDLLYRR+ETEILKREATPAMRLLNDLLN+HDGF+++ W+KECRKRM+DTFP
Sbjct: 160 DEKDAIRSLDLLYRRIETEILKREATPAMRLLNDLLNMHDGFNDDEWMKECRKRMIDTFP 219

Query: 675 REDPFSILVPAGFDIDNHQGQIRLPSEADDILLRVDFVREVDALLQEVRPQQDEAQAAQG 854
           REDPFSIL P GFDID H G +R P EADDILLRVDFVREVDALL+EVR +Q E Q  +G
Sbjct: 220 REDPFSILAPPGFDIDQHAGPVRPPLEADDILLRVDFVREVDALLKEVRQEQSEEQNVEG 279

Query: 855 LDPESIANRLKEQEKQRVIRQVEALLDLAVTLRW 956
            DPES+A++LK+QEKQR I +VEALLDLA++L+W
Sbjct: 280 FDPESVASKLKQQEKQRTIHKVEALLDLAISLKW 313


>ref|XP_004140086.1| PREDICTED: uncharacterized protein LOC101220904 [Cucumis sativus]
          Length = 314

 Score =  323 bits (827), Expect = 7e-86
 Identities = 176/286 (61%), Positives = 202/286 (70%), Gaps = 4/286 (1%)
 Frame = +3

Query: 111 SPSILKSPLRSVVLKNKSTQEKDLTGLPKEFYDDEWQAXXXXXXXXXXXXXXXXXXXXXX 290
           SPS  +     V+ ++ S +E  + GLPKE+YDDEWQA                      
Sbjct: 29  SPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEDR 88

Query: 291 XXXXXXXIGTRLQEYPEEEVRNARKLVSSFIRSXXXXXXXXXXXXXKGELTELVLMVIWN 470
                  IG RL+E+PEE+VR ARKLVSSFIR+             KGELTELVL+VIWN
Sbjct: 89  KVEEYREIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWN 148

Query: 471 RLDLARRDEEKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLNLHDGFDEEGWLKECR 650
           RLDLAR D+EKDA+RSLDLLYRRVETEILKREATPAMRLLN+LLN++DGFD EGWLK CR
Sbjct: 149 RLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDNEGWLKACR 208

Query: 651 KRMVDTFPREDPFSILVPAGFDIDNHQGQIR--LPSEADDILLRVDFVREVDALLQEVRP 824
           K MVDTFPREDPFSILVPAGFDID HQG +R  L  E+D+ LLRVDFVREVD LLQEV  
Sbjct: 209 KCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLAVESDNTLLRVDFVREVDELLQEVGA 268

Query: 825 QQDEAQ--AAQGLDPESIANRLKEQEKQRVIRQVEALLDLAVTLRW 956
            Q + Q   A   D ES+A+RLK+QEKQR IR VEALLDLA+ L+W
Sbjct: 269 VQSDVQNGNADSFDAESVASRLKQQEKQRTIRLVEALLDLAMNLKW 314


>emb|CAA65337.1| PAC [Arabidopsis thaliana]
          Length = 309

 Score =  321 bits (822), Expect = 3e-85
 Identities = 163/263 (61%), Positives = 197/263 (74%), Gaps = 4/263 (1%)
 Frame = +3

Query: 180 LTGLPKEFYDDEWQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGTRLQEYPEEEVRNA 359
           L G+P E+YDDEWQA                             IGTRL+E+PE+++R A
Sbjct: 47  LEGMPPEYYDDEWQARQREKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKA 106

Query: 360 RKLVSSFIRSXXXXXXXXXXXXXKGELTELVLMVIWNRLDLARRDEEKDAIRSLDLLYRR 539
           RKLVSSFIR+             KGEL ELVLM+IWNRLDLARRD+EKDAIRSLDLLYRR
Sbjct: 107 RKLVSSFIRAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRR 166

Query: 540 VETEILKREATPAMRLLNDLLNLHDGFDEEGWLKECRKRMVDTFPREDPFSILVPAGFDI 719
           VETEILKR+A+PAM+LLNDLLN+HDGF+++ WLK+CRKRM +TFPREDPFSIL+P GFDI
Sbjct: 167 VETEILKRQASPAMKLLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDI 226

Query: 720 DNHQGQIRLP--SEADDILLRVDFVREVDALLQEVRPQQDEAQAA--QGLDPESIANRLK 887
           D HQGQ+R P  +E D+ LLRVDFVREVDALLQEVR ++D    +  +GLDPE+IA + K
Sbjct: 227 DMHQGQLRPPIETETDNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFK 286

Query: 888 EQEKQRVIRQVEALLDLAVTLRW 956
           +QEKQR IRQ+EA+LDLA+ L+W
Sbjct: 287 QQEKQRTIRQIEAILDLALNLKW 309


>ref|NP_182332.1| pale cress protein [Arabidopsis thaliana]
           gi|75101925|sp|Q39089.1|PAC_ARATH RecName: Full=Protein
           PALE CRESS, chloroplastic; Flags: Precursor
           gi|1483213|emb|CAA65334.1| PAC [Arabidopsis thaliana]
           gi|21555469|gb|AAM63866.1| pale cress protein
           [Arabidopsis thaliana] gi|26450607|dbj|BAC42415.1|
           putative t9j23 pale cress protein [Arabidopsis thaliana]
           gi|28950889|gb|AAO63368.1| At2g48120 [Arabidopsis
           thaliana] gi|330255845|gb|AEC10939.1| pale cress protein
           [Arabidopsis thaliana]
          Length = 313

 Score =  321 bits (822), Expect = 3e-85
 Identities = 163/263 (61%), Positives = 197/263 (74%), Gaps = 4/263 (1%)
 Frame = +3

Query: 180 LTGLPKEFYDDEWQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGTRLQEYPEEEVRNA 359
           L G+P E+YDDEWQA                             IGTRL+E+PE+++R A
Sbjct: 51  LEGMPPEYYDDEWQARQREKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKA 110

Query: 360 RKLVSSFIRSXXXXXXXXXXXXXKGELTELVLMVIWNRLDLARRDEEKDAIRSLDLLYRR 539
           RKLVSSFIR+             KGEL ELVLM+IWNRLDLARRD+EKDAIRSLDLLYRR
Sbjct: 111 RKLVSSFIRAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRR 170

Query: 540 VETEILKREATPAMRLLNDLLNLHDGFDEEGWLKECRKRMVDTFPREDPFSILVPAGFDI 719
           VETEILKR+A+PAM+LLNDLLN+HDGF+++ WLK+CRKRM +TFPREDPFSIL+P GFDI
Sbjct: 171 VETEILKRQASPAMKLLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDI 230

Query: 720 DNHQGQIRLP--SEADDILLRVDFVREVDALLQEVRPQQDEAQAA--QGLDPESIANRLK 887
           D HQGQ+R P  +E D+ LLRVDFVREVDALLQEVR ++D    +  +GLDPE+IA + K
Sbjct: 231 DMHQGQLRPPIETETDNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFK 290

Query: 888 EQEKQRVIRQVEALLDLAVTLRW 956
           +QEKQR IRQ+EA+LDLA+ L+W
Sbjct: 291 QQEKQRTIRQIEAILDLALNLKW 313


Top