BLASTX nr result

ID: Coptis23_contig00002768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002768
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510283.1| conserved hypothetical protein [Ricinus comm...   180   3e-43
ref|XP_002272048.1| PREDICTED: probable protein Pop3 [Vitis vini...   180   3e-43
ref|XP_002280639.1| PREDICTED: probable protein Pop3 [Vitis vini...   179   7e-43
ref|NP_001235728.1| uncharacterized protein LOC100305974 [Glycin...   176   5e-42
pdb|1Q53|A Chain A, Solution Structure Of Hypothetical Arabidops...   173   4e-41

>ref|XP_002510283.1| conserved hypothetical protein [Ricinus communis]
           gi|223550984|gb|EEF52470.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score =  180 bits (456), Expect = 3e-43
 Identities = 86/109 (78%), Positives = 96/109 (88%)
 Frame = -2

Query: 584 MEEASGLVKHVLMAKFKDEITQDQIDKLIKGYANLVTLIQPMKSFHWGKDVSIENLHLGF 405
           MEEA G+VKHVL+AKFKDEI   +IDKLIKGYANLV LI PMK+FHWG DVSIENLH GF
Sbjct: 1   MEEAKGVVKHVLLAKFKDEIPTHEIDKLIKGYANLVNLIPPMKAFHWGSDVSIENLHQGF 60

Query: 404 THVFESTFESLEGVAEYVSHPAHVEFANEFLTALDKVLVIDYKPTTVNL 258
           THVFES+FES E +AEY+SHPAHVEFAN FL A+DKV+VIDYKPT V+L
Sbjct: 61  THVFESSFESTEDIAEYISHPAHVEFANLFLRAVDKVIVIDYKPTIVHL 109


>ref|XP_002272048.1| PREDICTED: probable protein Pop3 [Vitis vinifera]
           gi|296083186|emb|CBI22822.3| unnamed protein product
           [Vitis vinifera]
          Length = 109

 Score =  180 bits (456), Expect = 3e-43
 Identities = 85/109 (77%), Positives = 96/109 (88%)
 Frame = -2

Query: 584 MEEASGLVKHVLMAKFKDEITQDQIDKLIKGYANLVTLIQPMKSFHWGKDVSIENLHLGF 405
           MEEA GLVKHVL+AKFKD    DQI++LIKGYANLV L+ PMK+FHWGKDVSIEN+H GF
Sbjct: 1   MEEAKGLVKHVLLAKFKDSTPPDQIEELIKGYANLVNLVPPMKAFHWGKDVSIENMHQGF 60

Query: 404 THVFESTFESLEGVAEYVSHPAHVEFANEFLTALDKVLVIDYKPTTVNL 258
           THVFESTFES+EG+AEYVSHPAHVEFAN FL  L+KV+V DYKP TV+L
Sbjct: 61  THVFESTFESVEGIAEYVSHPAHVEFANLFLPHLEKVIVFDYKPITVHL 109


>ref|XP_002280639.1| PREDICTED: probable protein Pop3 [Vitis vinifera]
           gi|296083200|emb|CBI22836.3| unnamed protein product
           [Vitis vinifera]
          Length = 109

 Score =  179 bits (453), Expect = 7e-43
 Identities = 84/109 (77%), Positives = 96/109 (88%)
 Frame = -2

Query: 584 MEEASGLVKHVLMAKFKDEITQDQIDKLIKGYANLVTLIQPMKSFHWGKDVSIENLHLGF 405
           MEEA G+VKHVL+AKFKD    DQI++LIKGYANLV L+ PMK+FHWGKDVSIEN+H GF
Sbjct: 1   MEEAKGVVKHVLLAKFKDSTPPDQIEELIKGYANLVNLVPPMKAFHWGKDVSIENMHQGF 60

Query: 404 THVFESTFESLEGVAEYVSHPAHVEFANEFLTALDKVLVIDYKPTTVNL 258
           THVFESTFES+EG+AEYVSHPAHVEFAN FL  L+KV+V DYKP TV+L
Sbjct: 61  THVFESTFESVEGIAEYVSHPAHVEFANLFLPHLEKVIVFDYKPITVHL 109


>ref|NP_001235728.1| uncharacterized protein LOC100305974 [Glycine max]
           gi|255627155|gb|ACU13922.1| unknown [Glycine max]
          Length = 109

 Score =  176 bits (446), Expect = 5e-42
 Identities = 83/109 (76%), Positives = 96/109 (88%)
 Frame = -2

Query: 584 MEEASGLVKHVLMAKFKDEITQDQIDKLIKGYANLVTLIQPMKSFHWGKDVSIENLHLGF 405
           MEEA G+VKHVL+AKFKD++T ++I++LIK YANLV LI PMKSFHWGKDVS ENLH GF
Sbjct: 1   MEEAKGVVKHVLLAKFKDDVTPERIEELIKDYANLVNLIPPMKSFHWGKDVSAENLHQGF 60

Query: 404 THVFESTFESLEGVAEYVSHPAHVEFANEFLTALDKVLVIDYKPTTVNL 258
           THVFESTFES EGVAEYV+HP HVE+AN FL+ L+KV+VIDYKPT V L
Sbjct: 61  THVFESTFESPEGVAEYVAHPVHVEYANLFLSCLEKVIVIDYKPTVVKL 109


>pdb|1Q53|A Chain A, Solution Structure Of Hypothetical Arabidopsis Thaliana
           Protein At3g17210. Center For Eukaryotic Structural
           Genomics Target 13081 gi|159162872|pdb|1Q53|B Chain B,
           Solution Structure Of Hypothetical Arabidopsis Thaliana
           Protein At3g17210. Center For Eukaryotic Structural
           Genomics Target 13081
          Length = 112

 Score =  173 bits (438), Expect = 4e-41
 Identities = 81/109 (74%), Positives = 97/109 (88%)
 Frame = -2

Query: 584 MEEASGLVKHVLMAKFKDEITQDQIDKLIKGYANLVTLIQPMKSFHWGKDVSIENLHLGF 405
           MEEA G VKHVL+A FKD ++ ++I++LIKGYANLV LI+PMK+FHWGKDVSIENLH G+
Sbjct: 4   MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGY 63

Query: 404 THVFESTFESLEGVAEYVSHPAHVEFANEFLTALDKVLVIDYKPTTVNL 258
           TH+FESTFES E VAEY++HPAHVEFA  FL +LDKVLVIDYKPT+V+L
Sbjct: 64  THIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL 112


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