BLASTX nr result

ID: Coptis23_contig00002766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002766
         (1597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245...   379   e-102
ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|2...   356   1e-95
ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|1...   346   9e-93
ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|22354271...   339   1e-90
ref|NP_001240015.1| uncharacterized protein LOC100817223 precurs...   325   2e-86

>ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera]
            gi|298205266|emb|CBI17325.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  379 bits (973), Expect = e-102
 Identities = 204/358 (56%), Positives = 258/358 (72%)
 Frame = +2

Query: 110  SNGSILFIDGPDNHFLRTHSSHALPKTSSMSLSDVGAAISVLLGFNPPASLSADSSSKLN 289
            ++GSI F+D P + FLR  SS    K  S+ L +VGAA+SVLLGF P ++LSA SSSKLN
Sbjct: 26   ASGSIFFLDSPTHPFLRPRSSDDAMKVDSVLLPEVGAAVSVLLGFAPSSTLSAASSSKLN 85

Query: 290  EVLSPNPFNRPRAVLMLEVGGTQEDQQLVMDHLSNAQVGSAIRSKVLFESTKAEIHLPGK 469
            E+L PNPF RPR+VLMLEV G  ED ++V++H  NA   SA++    + + KAEI LPG 
Sbjct: 86   EILLPNPFERPRSVLMLEVRGV-EDPEVVVEH-DNALFRSALKRDFFYGTDKAEILLPGD 143

Query: 470  DEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLASGTSLNL 649
            D+VSV+SLDE L  + +  C DKE+ + ASW GG YV++A  PLNGELT+ LA G +LNL
Sbjct: 144  DKVSVVSLDERLSFDSNTNCTDKEISDFASWMGGLYVANALKPLNGELTIPLAGGANLNL 203

Query: 650  HMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALREKHDLDG 829
            HMSK+ D EFI +++SLI NI+R  EM  D S S+ + AEL+ G F G+K L E++   G
Sbjct: 204  HMSKKADTEFIASLLSLIHNIKRVIEMRQDLSGSMQNAAELLTGCFDGIKVLDEQYGPSG 263

Query: 830  FSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQPSIRLLG 1009
             ++Q +EL +TTL+K+F SLQ AYKGQIVGV+ F   P       LNV  TSQPS R L 
Sbjct: 264  VAQQGVELLLTTLSKMFGSLQVAYKGQIVGVISFTGTPP-SSEKMLNVMFTSQPSARWLA 322

Query: 1010 EVNNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 1183
            E  +S D+T I ++ LVR+TLAWITGIIL+ STL+GIYFLLNMPLTRDTLLYSNVKLD
Sbjct: 323  ETEDSPDLTAIMKIALVRKTLAWITGIILVASTLLGIYFLLNMPLTRDTLLYSNVKLD 380


>ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  356 bits (913), Expect = 1e-95
 Identities = 201/359 (55%), Positives = 252/359 (70%)
 Frame = +2

Query: 107  ESNGSILFIDGPDNHFLRTHSSHALPKTSSMSLSDVGAAISVLLGFNPPASLSADSSSKL 286
            E+ GS+ FID     +LRT S   +    SMSL +VGAA+SVLLGF P  SLSA SSSKL
Sbjct: 25   ETAGSVFFIDSQTRQYLRTPSPKDV--VQSMSLREVGAAVSVLLGFAPSDSLSAASSSKL 82

Query: 287  NEVLSPNPFNRPRAVLMLEVGGTQEDQQLVMDHLSNAQVGSAIRSKVLFESTKAEIHLPG 466
            NEVL PNPFNRPRAV MLEV G +E   +     +NA    A +SK++  S KA I LPG
Sbjct: 83   NEVLMPNPFNRPRAVFMLEVTGGEEIPSVAEQ--ANAMFNGAFKSKIVLGSDKAGIELPG 140

Query: 467  KDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLASGTSLN 646
             +EVSV+SLDE L     A   DKE+ + ASW GGSYV D  +  NGEL + LASG + +
Sbjct: 141  -EEVSVVSLDEEL-----ADFTDKEISDFASWLGGSYVVDPLEAWNGELAIPLASGATTS 194

Query: 647  LHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALREKHDLD 826
             HMSK+ +REFI ++++L RN RRA EMH D S+S   PAEL+ G F GLKAL E++  +
Sbjct: 195  FHMSKKANREFIASLLALFRNSRRAVEMHEDLSQSTQPPAELLKGCFDGLKALGEQYGPE 254

Query: 827  GFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQPSIRLL 1006
            G +++ +EL +TTL+K+F SLQ AYKGQI GV+ FN  P  E  + L+V +TSQPS R L
Sbjct: 255  GAAQKGLELLLTTLSKMFDSLQTAYKGQIAGVIFFNTAPASESETVLDVMLTSQPSARWL 314

Query: 1007 GEVNNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 1183
             E    ++ T IAEV LVR TLAWITGI+L+++TL+GIY+LLNMP+TRDTLLYSNVKLD
Sbjct: 315  EETKTPSNGT-IAEVALVRMTLAWITGIVLIIATLLGIYYLLNMPITRDTLLYSNVKLD 372


>ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1|
            unknown [Populus trichocarpa] gi|222842142|gb|EEE79689.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  346 bits (888), Expect = 9e-93
 Identities = 194/359 (54%), Positives = 254/359 (70%)
 Frame = +2

Query: 107  ESNGSILFIDGPDNHFLRTHSSHALPKTSSMSLSDVGAAISVLLGFNPPASLSADSSSKL 286
            E +GS++FID     +LR+ S + + +++SMSL +VGAA+SVLLGF P  +LSA SS KL
Sbjct: 25   EISGSVIFIDSQTRQYLRSPSPNDVVQSNSMSLQEVGAAVSVLLGFVPSDALSATSSLKL 84

Query: 287  NEVLSPNPFNRPRAVLMLEVGGTQEDQQLVMDHLSNAQVGSAIRSKVLFESTKAEIHLPG 466
            NEVL PNPFNRPRAV MLEV G   +   V D  +N    +A +SK++  S KA+I LPG
Sbjct: 85   NEVLLPNPFNRPRAVFMLEVTG---ELPSVADQ-ANVMFNAAYKSKIVPGSNKADIQLPG 140

Query: 467  KDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLASGTSLN 646
             +EVSV+SLDE           DK++ + ASW GGSY  D  + L GEL + LASG +++
Sbjct: 141  -EEVSVVSLDEEF-----VDFTDKDISDFASWLGGSYAVDPLEALKGELAIPLASGATID 194

Query: 647  LHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALREKHDLD 826
            LHMSK+ +REFI ++++L+RN R+A EMH D S S   PAEL+ GSF GLKAL+E +  +
Sbjct: 195  LHMSKKANREFIASLLALLRNSRKAVEMHGDLSLSNQPPAELLKGSFDGLKALQEHYGPE 254

Query: 827  GFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQPSIRLL 1006
            G +++ +EL +T L+K+F SLQ AYKGQIVG +LFN  P  E  + LNV +TS+PS R L
Sbjct: 255  GAAQKGLELLITMLSKMFDSLQAAYKGQIVGAILFNTAPAPESKTLLNVMLTSRPSARWL 314

Query: 1007 GEVNNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 1183
             E    T I  IA V LVR TLAWITGI+L+++TL+GIYFL +MPLT+DTLLYSNVKLD
Sbjct: 315  EETKEPT-IEAIAVVALVRITLAWITGIVLIIATLLGIYFLFSMPLTKDTLLYSNVKLD 372


>ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP,
            putative [Ricinus communis]
          Length = 369

 Score =  339 bits (869), Expect = 1e-90
 Identities = 197/365 (53%), Positives = 254/365 (69%), Gaps = 2/365 (0%)
 Frame = +2

Query: 95   ANEEESNGSILFIDGPDNHFLRTHSSHALPKTSSMSLSDVGAAISVLLGFNPPASLSADS 274
            A+ +E  GSILFIDG  + +LR      + ++  M+  +VGAA+SVLLGF PP +LSA  
Sbjct: 22   ASAKERTGSILFIDGNSHQYLRND----VVQSRLMTPVEVGAAVSVLLGFAPPVTLSAAG 77

Query: 275  SSKLNEVLSPNPFNRPRAVLMLEVGGTQEDQQLVMDHLSNAQVGSAIRSKVLFESTKAEI 454
            SSKLNEVL PNPF+RP AV +LEV G  +   LV     N    +A + K   +S KA+I
Sbjct: 78   SSKLNEVLMPNPFDRPGAVFLLEVTGVND---LVASE--NVMSSNAFKRKFALDSDKAQI 132

Query: 455  HLPGKDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLASG 634
             LPG +EVSVISLDE LG        DKEL +L SW GGSY+ +  + LNGEL + LASG
Sbjct: 133  ELPG-EEVSVISLDEKLG-----DFTDKELSDLVSWLGGSYIVNGLESLNGELIIPLASG 186

Query: 635  TSLNLHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALREK 814
             +L LHMSK+ DREFI ++++L  N +RA E+H D S++I+ PAEL++G F G+KAL+E+
Sbjct: 187  ANLKLHMSKKADREFIESLLTLFHNSKRAIELHEDLSQAIHGPAELIMGHFHGIKALQEQ 246

Query: 815  HDLDGFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQPS 994
            +  +   +Q +EL V TL+K+  S Q AYKGQIVGV++ NE+  +E    LNV  TS PS
Sbjct: 247  YGRE-VVQQGLELLVATLSKMVDSFQVAYKGQIVGVIISNERSTLESEKLLNVMFTSWPS 305

Query: 995  IRLLGEV--NNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYS 1168
             R L E   +N+TD T I EV LVR+TLAW+TG+ILL+STL+GIY LLNMPLTRDTLLYS
Sbjct: 306  ARWLAEAEGSNATD-TAIMEVALVRKTLAWLTGLILLISTLIGIYLLLNMPLTRDTLLYS 364

Query: 1169 NVKLD 1183
            NVKLD
Sbjct: 365  NVKLD 369


>ref|NP_001240015.1| uncharacterized protein LOC100817223 precursor [Glycine max]
            gi|255647811|gb|ACU24365.1| unknown [Glycine max]
          Length = 369

 Score =  325 bits (833), Expect = 2e-86
 Identities = 185/362 (51%), Positives = 244/362 (67%), Gaps = 3/362 (0%)
 Frame = +2

Query: 107  ESNGSILFIDGPDNHFLRTHSSHALPKTSSMSLSDVGAAISVLLGFNPPASLSADSSSKL 286
            E++GS+ F+D   N FLR  SS+   +  SM L +VGAA+SVLLGF PP++ SA SSSKL
Sbjct: 25   EASGSVFFVDSSSNQFLRARSSN--DEQPSMLLQEVGAAVSVLLGFAPPSTFSAASSSKL 82

Query: 287  NEVLSPNPFNRPRAVLMLEVGGTQEDQQLVMDHLSNAQVGSAIRSKVLFESTKAEIHLPG 466
            NEVL PNPF RPRAV +LEV G     ++V D   N    ++  S     S K  I LP 
Sbjct: 83   NEVLIPNPFKRPRAVFLLEVNGINALGKIVQD---NPMFSNSFWST---NSDKVGIQLPD 136

Query: 467  KDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLASGTSLN 646
            + +VSV+SLDE L         DKE+ + +S  GGSY  DA +PLNG LT+ LA+G S+N
Sbjct: 137  ETDVSVVSLDEQL-----EDWTDKEISDFSSLIGGSYAPDALEPLNGVLTIPLANGASVN 191

Query: 647  LHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALREKHDLD 826
            LHMSK+ +R+FIV ++SL  N++RA +MH + S+S   PAEL+ G F+G+K L+E+++ +
Sbjct: 192  LHMSKKAERKFIVGLMSLTHNVQRAIQMHDNLSQSAKGPAELLTGCFNGIKVLQEQYETE 251

Query: 827  GFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKIT-SQPSIRL 1003
              ++  +EL   T+TK+F SLQEAYKGQIVG++  +     E G K +V  T   P  R 
Sbjct: 252  SIAQHGVELLYATMTKIFSSLQEAYKGQIVGIIYCHVATTQESGKKFDVIFTPHHPYARW 311

Query: 1004 LGEVN--NSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVK 1177
            L E N  N+T    + EV+LVRRTLAW+TGIILL+ST MGI +L+NMPLTRDTLLYSNVK
Sbjct: 312  LAETNAVNAT----LPEVVLVRRTLAWVTGIILLISTFMGICYLMNMPLTRDTLLYSNVK 367

Query: 1178 LD 1183
            LD
Sbjct: 368  LD 369


Top