BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002758
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   330   4e-88
ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|2...   329   6e-88
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...   324   2e-86
ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [...   319   6e-85

>ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|222833576|gb|EEE72053.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  332 bits (850), Expect = 1e-88
 Identities = 165/201 (82%), Positives = 184/201 (91%), Gaps = 2/201 (0%)
 Frame = +3

Query: 72  DYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 251
           D SFKILLIGDSGVGKSSLLV+FIS+SVE ++PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 13  DLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 72

Query: 252 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 431
           QERFRT+TSSYYR AQGIILVYDVTRRE+FTNL+DVW KEV+LYSTNQDC+KMLVGNKVD
Sbjct: 73  QERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKVD 132

Query: 432 RDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 611
           +D ER+VTR+EG++LA+EH C FLECSAKT+QNV+QCFEELALKI+EVPSL+EEGST VK
Sbjct: 133 KDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAVK 192

Query: 612 RNSLKQKQVHKAPS--GGCCS 668
           RN LKQK     PS  GGCCS
Sbjct: 193 RNILKQKPDQHPPSSGGGCCS 213


>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  330 bits (845), Expect = 4e-88
 Identities = 166/200 (83%), Positives = 184/200 (92%), Gaps = 1/200 (0%)
 Frame = +3

Query: 72  DYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 251
           D SFKILLIGDS VGKSSLLV+FIS+SVE L+PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 12  DLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 71

Query: 252 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 431
           QERFRT+TSSYYR AQGIILVYDVTRRESFTNL+DVWAKEVELYSTNQDC+KMLVGNKVD
Sbjct: 72  QERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKVD 131

Query: 432 RDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 611
           R+ ER V+REEGIALA+EH C+F ECSAKT++NV++CFEELALKI+EVPSLLEEGSTV K
Sbjct: 132 RESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVGK 191

Query: 612 RNSLKQKQVHK-APSGGCCS 668
           RN LK K  ++  P+GGCCS
Sbjct: 192 RNILKPKPENQPPPTGGCCS 211


>ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|222867539|gb|EEF04670.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  329 bits (844), Expect = 6e-88
 Identities = 163/200 (81%), Positives = 186/200 (93%), Gaps = 1/200 (0%)
 Frame = +3

Query: 72  DYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 251
           D SFKILLIGDSGVGKSSLLV+FIS+SVE L+PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 9   DLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 68

Query: 252 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 431
           QERFRT+TSSYYR AQGIILVYDVTRRE+FTNL+DVW KEVEL+STNQDC+KMLVGNKVD
Sbjct: 69  QERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDCVKMLVGNKVD 128

Query: 432 RDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 611
           ++  R+VT++EG+ALA++H C+FLECSAKT++NV+QCFEELALKI+EVPSLLEEGST VK
Sbjct: 129 KESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVPSLLEEGSTAVK 188

Query: 612 RNSLKQK-QVHKAPSGGCCS 668
           RN LKQK + H A +GGCCS
Sbjct: 189 RNILKQKPEHHVASNGGCCS 208


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score =  324 bits (831), Expect = 2e-86
 Identities = 162/200 (81%), Positives = 181/200 (90%), Gaps = 1/200 (0%)
 Frame = +3

Query: 72  DYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 251
           D SFKILLIGDSGVGKSSLLV+FIS+SVE L+PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 11  DLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 70

Query: 252 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 431
           QERFRT+TSSYYR AQGIILVYDVTRRE+FTNL DVW KE+ELYSTNQ+C++MLVGNKVD
Sbjct: 71  QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVD 130

Query: 432 RDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 611
           R+ ER V+REEGIALA+E  C+FLECSA+T+QNV+QCFEELALKI+EVPSLLEEGS+ VK
Sbjct: 131 RESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEGSSAVK 190

Query: 612 RNSLKQKQVHKA-PSGGCCS 668
           RN LKQK  H+     GCCS
Sbjct: 191 RNILKQKPEHQTNTQSGCCS 210


>ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  319 bits (818), Expect = 6e-85
 Identities = 161/200 (80%), Positives = 181/200 (90%), Gaps = 1/200 (0%)
 Frame = +3

Query: 72  DYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 251
           D SFKILLIGDSGVGKSSLLV+FIS+SVE LSPTIGVDFKIK L VGGKRLKLTIWDTAG
Sbjct: 12  DLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAG 71

Query: 252 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 431
           QERFRT+ SSYYR AQGIILVYDVTRRE+FTNL++VW+KEVELYSTNQDC+K+LVGNKVD
Sbjct: 72  QERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVD 131

Query: 432 RDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 611
           RD ER V+REEG+ALA+E  C+ LECSAKT++NV+QCFEELALKI+E PSLLEEGST VK
Sbjct: 132 RDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAVK 191

Query: 612 RNSLKQKQVHKA-PSGGCCS 668
           R+ LK KQ  +A  +GGCCS
Sbjct: 192 RSVLKPKQESQASQNGGCCS 211