BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002752
         (1568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36342.1| hypothetical protein [Ipomoea trifida]                122   3e-25
gb|AAS79577.1| putative PHD zinc finger protein [Ipomoea trifida...   119   2e-24
ref|NP_001168115.1| uncharacterized protein LOC100381857 [Zea ma...   115   4e-23
ref|XP_002436311.1| hypothetical protein SORBIDRAFT_10g000260 [S...   110   1e-21
dbj|BAD69373.1| PHD zinc finger protein-like [Oryza sativa Japon...   107   9e-21

>dbj|BAF36342.1| hypothetical protein [Ipomoea trifida]
          Length = 770

 Score =  122 bits (306), Expect = 3e-25
 Identities = 128/453 (28%), Positives = 191/453 (42%), Gaps = 44/453 (9%)
 Frame = -2

Query: 1228 SEEECGNNVKSLMIVEEMENSVK---NVSSEVGVKNNADLSRNGEELKNNIGKELS---- 1070
            ++ ECG ++    +      S+    ++S + G +  +   +  ++  N +  + S    
Sbjct: 29   AQAECGISIGQKRVTRSQNGSLNGRASISPQNGSRTKSSTVKRRKKEANVVTADQSLSHS 88

Query: 1069 NEVVSFRRFTRSALKSEAVQK-----RTEKAKNDLIVSPVVEEPKSSNMRKELSNEVSCR 905
            NE +      RS  + E V+K       E+ K+D++     +E   + +  E+  + +  
Sbjct: 89   NEKLDKTEELRSKDEGEKVEKLPLTSEWEEPKSDVVDGASEDEKNGTAVDSEIGEQETAC 148

Query: 904  RFTRSALKCEVGPMKD---NDSVEKAPREIVICLRSLVSVDASTKALVPR-VMDVGSKVQ 737
               R  L    G  K+   N  V   P          V VD S        ++D G   Q
Sbjct: 149  VMEREELNSLGGSQKEKLINGDVAAKP----------VDVDNSGNGEENNGLVDCGGLFQ 198

Query: 736  -------DVSKEAKYVDK----KSPRELVFCLRSPNAVDTNNG--------LDKALTRKP 614
                   DV+++ K VDK    K    LV C          NG        +DK   ++ 
Sbjct: 199  KELLINGDVAEKPKEVDKSDNDKQSDSLVNCGGGVEKEKELNGDVTEKMMDVDKTDNKEQ 258

Query: 613  LKRLTKSAL---------KLKSEQTVMIVAHDTSSVEPPRRFTRSALTCKSEAGVMDENS 461
            L  L + A+         K KSE      A+ ++    P     S ++  SE        
Sbjct: 259  LDSLMELAMEELPMSGDCKTKSEAIKADCAYGSALATVPESVENSKVSTSSE-------- 310

Query: 460  KEESAPLKKPMRRLTRSALKLKDEPMGMLSTATPCGTIAVFDDAHNNEANANICKRATDV 281
                    KP+RR TRS LK K + M    +A+P       D   ++EA+A         
Sbjct: 311  --------KPLRRFTRSCLKPKQQAM----SASPAEDTKAEDALESDEASA--------- 349

Query: 280  ASSIRTPLHKKLEMKMSKKITLTKFPTKISELLETGMLEGLSVSYIFRGQQKAELRGIIK 101
               I T    KLEMKMSKK+ L K PTK+  LL TG+LEGL V Y  RG+ +  L+G+I+
Sbjct: 350  ---IGTT--SKLEMKMSKKVALVKIPTKLKGLLATGLLEGLPVRYA-RGRPEKGLQGVIQ 403

Query: 100  NRGIMCSCALCKGRKVVTPINFEQHAGSTNKKP 2
              GI+C C  C G KVVTP  FE HAGS+NK+P
Sbjct: 404  GSGILCFCQNCGGTKVVTPNQFEMHAGSSNKRP 436


>gb|AAS79577.1| putative PHD zinc finger protein [Ipomoea trifida]
            gi|117165997|dbj|BAF36299.1| hypothetical protein
            [Ipomoea trifida]
          Length = 1047

 Score =  119 bits (299), Expect = 2e-24
 Identities = 122/453 (26%), Positives = 198/453 (43%), Gaps = 44/453 (9%)
 Frame = -2

Query: 1228 SEEECGNNVKSLMIVEEMENSVK---NVSSEVGVKNNADLSRNGEELKNNIGKELS---- 1070
            ++ ECG ++    +      ++    ++S + G +  +   +  ++  N +  + S    
Sbjct: 29   AQAECGISIGQKRVTRSQNGALNGRASISPQNGSRTKSSTVKRRKKEANVVTADQSLSHS 88

Query: 1069 NEVVSFRRFTRSALKSEAVQK-----RTEKAKNDLIVSPVVEEPKSSNMRKELSNEVSCR 905
            NE +      RS  + E V+K       E+ K+D++     +E   + +  E+  + +  
Sbjct: 89   NEKLDKTEELRSKDEGEKVEKLPLTSEWEEPKSDVVDGASEDEKNGTAVDSEIGEQETAC 148

Query: 904  RFTRSALKCEVGPMKD---NDSVEKAPREIVICLRSLVSVDASTKALVPR-VMDVGSKVQ 737
               R  L    G  K+   N  V   P          V VD S        ++D G   Q
Sbjct: 149  VMEREELNSLGGSQKEKLINGDVAAKP----------VDVDNSGNGEENNGLVDCGGLFQ 198

Query: 736  -------DVSKEAKYVDKKSPRELVFCLRSPNAVDTNNGLDKALTRK-PLKRLTKSALKL 581
                   DV+++ K VDK    +     +S + V+   G++K       +     + +K 
Sbjct: 199  KELLINGDVAEKPKEVDKSDNDK-----QSDSLVNCGGGVEKERELNGDVTEAMMNVVKT 253

Query: 580  KSEQTVMIVAHDTSSVEPPRRFTRSALTCKSEAGVMD----------------ENSKEES 449
             +E+ +       S +EP       +  CK+++  +                 ENSK  +
Sbjct: 254  DNEEQL------DSLMEPTMEELPMSGDCKTKSEAIKADCAYGSALATVPESVENSKVST 307

Query: 448  APLKKPMRRLTRSALKLKDEPMGMLSTATPCGTIAVFDDAHNNEANANICKRATDVASSI 269
            +  +KP+RR TRS LK K + M    +A+P       D   ++EA+A            I
Sbjct: 308  SS-EKPLRRFTRSCLKTKQQAM----SASPAEDTKAEDALESDEASA------------I 350

Query: 268  RTPLHKKLEMKMSKKITLTKFPTKISELLETGMLEGLSVSYI----FRGQQKAELRGIIK 101
             T    KLEMKMSKK+ L K PTK+  LL TG+LEGL V Y+     RG+ +  L+G+I+
Sbjct: 351  GTT--SKLEMKMSKKVALVKIPTKLKGLLATGLLEGLPVRYVRVTKARGRPEKGLQGVIQ 408

Query: 100  NRGIMCSCALCKGRKVVTPINFEQHAGSTNKKP 2
              GI+C C  C G KVVTP  FE HAGS+NK+P
Sbjct: 409  GSGILCFCQNCGGTKVVTPNQFEMHAGSSNKRP 441


>ref|NP_001168115.1| uncharacterized protein LOC100381857 [Zea mays]
           gi|223946087|gb|ACN27127.1| unknown [Zea mays]
           gi|413942541|gb|AFW75190.1| hypothetical protein
           ZEAMMB73_711939 [Zea mays]
          Length = 849

 Score =  115 bits (287), Expect = 4e-23
 Identities = 88/234 (37%), Positives = 118/234 (50%), Gaps = 16/234 (6%)
 Frame = -2

Query: 655 DTNNGLDKALTRKPLKRLTKSALKLKSEQTVMIVAHDTSSVEPPRRFTRSAL-------- 500
           DT+N   + L ++ ++ +  S   L +E TV   A   + ++P RRFTRS L        
Sbjct: 75  DTSNSNGENLQQQAVENVLVSTTML-AEDTVTPAA--AAGLKPARRFTRSLLKNNKPDKE 131

Query: 499 ---TCKSEAGVMDENSKEESAP----LKKPMRRLTRSALKLKDEPMGMLSTATPCGTIAV 341
              +C+S+A    + SK+ S      L+KP RR TRS LK K E       ++  G+  V
Sbjct: 132 ESASCESQA--TPDGSKDASVGFTLLLEKPQRRFTRSLLKTKVE-------SSLVGSDDV 182

Query: 340 FDDAHNNEANANICKRATDVASSIRTPLHKKLEMKMSKKIT-LTKFPTKISELLETGMLE 164
            D A ++                   P  KK+EMKMSKK+  LTK P  I ELL TGMLE
Sbjct: 183 LDSASDSP------------------PSVKKMEMKMSKKVACLTKHPGNIRELLNTGMLE 224

Query: 163 GLSVSYIFRGQQKAELRGIIKNRGIMCSCALCKGRKVVTPINFEQHAGSTNKKP 2
           G+ V YI    +KA L+G+I    I C C  C G K ++   FEQHAGST K P
Sbjct: 225 GMPVMYIIPHSKKAVLKGVITGCNIRCFCLSCNGAKAISAYYFEQHAGSTKKHP 278


>ref|XP_002436311.1| hypothetical protein SORBIDRAFT_10g000260 [Sorghum bicolor]
           gi|241914534|gb|EER87678.1| hypothetical protein
           SORBIDRAFT_10g000260 [Sorghum bicolor]
          Length = 704

 Score =  110 bits (275), Expect = 1e-21
 Identities = 83/232 (35%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
 Frame = -2

Query: 655 DTNNGLDKALTRKPLKRLTKSALKLKSEQTVMIVAHDTSSVEPPRRFTRSAL-------- 500
           D +N     L ++ +  +  S   L  +      A D   ++P RRFTRS L        
Sbjct: 272 DNSNSNGARLQQQAVDNVLLSNTMLAEDAATPAAAAD---LKPARRFTRSLLKNNKPDKE 328

Query: 499 ---TCKSEAGVMDENSKEESAPL--KKPMRRLTRSALKLKDEPMGMLSTATPCGTIAVFD 335
               C+S+A     N      PL  +KP RR TRS LK K E            ++   D
Sbjct: 329 ESAACESQATPDGSNDASFDFPLLLEKPQRRFTRSLLKTKVE-----------SSLVGSD 377

Query: 334 DAHNNEANANICKRATDVASSIRTPLHKKLEMKMSKKIT-LTKFPTKISELLETGMLEGL 158
           DA ++ +++               P  KK+EMKMSKK+  LTK P  I ELL TG+LEG+
Sbjct: 378 DALDSASDS---------------PPVKKMEMKMSKKVACLTKHPGNIRELLNTGLLEGM 422

Query: 157 SVSYIFRGQQKAELRGIIKNRGIMCSCALCKGRKVVTPINFEQHAGSTNKKP 2
            V YI    +KA L+G+I    I C C  C G K V+   FEQHAGST K P
Sbjct: 423 PVMYIIPHSKKAVLKGVITGCNIRCFCLSCNGSKAVSAYYFEQHAGSTKKHP 474


>dbj|BAD69373.1| PHD zinc finger protein-like [Oryza sativa Japonica Group]
          Length = 1025

 Score =  107 bits (267), Expect = 9e-21
 Identities = 89/248 (35%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
 Frame = -2

Query: 676 LRSPNAVDTNNGLD---KALTRKPLKRLTKSAL---KLKSEQTVMIVAHDTSSVEPPRRF 515
           L+ P  V   NG D   ++  +    ++  +AL    L +E T    +  T+ ++P RRF
Sbjct: 227 LQEPPTVTAANGRDVSHESFEQNLQHQVLDNALTDPSLLAESTATPAS--TAGLKPARRF 284

Query: 514 TRSALTCKSE------------AGVMDENSKEESAPLK----KPMRRLTRSALKLKDEPM 383
           TRS L  K E              ++ E++ E S  L     KP RR TRS LK+K E  
Sbjct: 285 TRSLLKNKPEEEPTASKSQDPAVSMISEDNNEASVDLALAPGKPQRRFTRSLLKVKVEAR 344

Query: 382 GMLSTATPCGTIAVFDDAHNNEANANICKRATDVASSIRTPLHKKLEMKMSKKIT-LTKF 206
                              NN   +   K A D  S     + KK+EMKMSKK+  LTK 
Sbjct: 345 ST-----------------NNLLQS---KEAIDSTSDSSRSV-KKMEMKMSKKVACLTKH 383

Query: 205 PTKISELLETGMLEGLSVSYIFRGQQKAELRGIIKNRGIMCSCALCKGRKVVTPINFEQH 26
           P+ I ELL TG+LEG+ V YI    +KA L+G+I    I C C  C G K V    FEQH
Sbjct: 384 PSNIRELLNTGLLEGMPVRYIIPSSKKAVLKGVITGCNIRCFCLSCNGSKDVCSYFFEQH 443

Query: 25  AGSTNKKP 2
           AGS  K P
Sbjct: 444 AGSNKKHP 451