BLASTX nr result

ID: Coptis23_contig00002751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002751
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vini...   313   5e-83
gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]         304   3e-80
ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|2...   301   1e-79
emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]   297   4e-78
ref|XP_002309771.1| predicted protein [Populus trichocarpa] gi|2...   290   3e-76

>ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vinifera]
           gi|297734369|emb|CBI15616.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  313 bits (802), Expect = 5e-83
 Identities = 164/238 (68%), Positives = 180/238 (75%), Gaps = 2/238 (0%)
 Frame = +2

Query: 173 MCTRGHWRPAEDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFT 352
           MCTRGHWRPAEDEKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 1   MCTRGHWRPAEDEKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFT 60

Query: 353 EEEEERLLASHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSL 532
           EEEEERLLASHRIHGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS 
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSW 120

Query: 533 ISGRKSVSKHDMGMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAID 706
           I+ RKS+SK D    I  + RN SS   Y E C + +I  H   +              D
Sbjct: 121 INERKSISKPDRQQMIGCDTRNLSS---YVENCYENMI--HCTKMLE------------D 163

Query: 707 KNDPVEFYDFLQVNTDSNRSEVINHARNXXXXXXXXARKQMKDEAGNPFIDFLSIGSS 880
           +  PVEFYDFL VNTDSNRSEVI+HAR         A    + +AG PFIDFLS+GSS
Sbjct: 164 RTQPVEFYDFLNVNTDSNRSEVIDHARRDDEEVEQEAMDH-QSKAGVPFIDFLSVGSS 220


>gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]
          Length = 236

 Score =  304 bits (778), Expect = 3e-80
 Identities = 155/237 (65%), Positives = 182/237 (76%), Gaps = 5/237 (2%)
 Frame = +2

Query: 173 MCTRGHWRPAEDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFT 352
           MCTRGHWRPAEDEKL+ELVE YGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 353 EEEEERLLASHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSL 532
           EEEEERLLASHRIHGNRW++IARLFPGRTDNAVKNHWHVIMARR RERSR +AKR AQ+L
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQAL 120

Query: 533 ISGRKSVSKHDMGMKIEHRNHSS-IREYYERCSDPIIYNHH---ANLKNIYSPVPNYSPA 700
           ++ +K  SK DM +  E R+ SS +++Y E+     +  H    A  K  Y+   + S  
Sbjct: 121 VNEQKFSSKQDMQINCETRSFSSFVKKYCEKFGQYPLITHSYLPAFWKEFYN--DDLSNC 178

Query: 701 IDKNDPVEFYDFLQVNTDSNRSEVINHA-RNXXXXXXXXARKQMKDEAGNPFIDFLS 868
            D+N P+EFYDFLQVNT+SN+SEVI++A R            + + +AG PFIDF S
Sbjct: 179 EDQNRPIEFYDFLQVNTESNKSEVIDNARREDEEVDQQEVILEHQSKAGVPFIDFFS 235


>ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|222858997|gb|EEE96544.1|
           predicted protein [Populus trichocarpa]
           gi|225626259|gb|ACN97179.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 243

 Score =  301 bits (772), Expect = 1e-79
 Identities = 157/239 (65%), Positives = 182/239 (76%), Gaps = 6/239 (2%)
 Frame = +2

Query: 173 MCTRGHWRPAEDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFT 352
           MCTRGHWRPAEDEKL+ELVE YGPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 353 EEEEERLLASHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSL 532
           EEEEERLLASHRIHGNRW+IIAR FPGRTDNAVKNHWHVIMARR RERSR +AKRAAQ+L
Sbjct: 61  EEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTL 120

Query: 533 ISGRKSVSKHD-MGMKIEHRNHSSI-REYYERCSDPIIYNHH---ANLKNIYSPVPNYSP 697
           ++  K  SK D M M  E RN SS  ++Y E+     +  H    A  K  Y+  P++  
Sbjct: 121 VNDNKLSSKQDHMHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEFYNEDPSHCE 180

Query: 698 AIDKNDPVEFYDFLQVNTDSNRSEVINHA-RNXXXXXXXXARKQMKDEAGNPFIDFLSI 871
             D++ P+EFYDFLQVNTDSN+SEVI++A R+        A +  + +A  PFIDF S+
Sbjct: 181 --DQSRPIEFYDFLQVNTDSNKSEVIDNARRDDEEVDQQEALENNQSKADVPFIDFFSV 237


>emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]
          Length = 371

 Score =  297 bits (760), Expect = 4e-78
 Identities = 157/234 (67%), Positives = 174/234 (74%), Gaps = 2/234 (0%)
 Frame = +2

Query: 173 MCTRGHWRPAEDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFT 352
           MCTRGHWRPAEDEKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 1   MCTRGHWRPAEDEKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFT 60

Query: 353 EEEEERLLASHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSL 532
           EEEEERLLASHRIHGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS 
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSW 120

Query: 533 ISGRKSVSKHDMGMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAID 706
           I+ RKS+SK D    I  + RN SS   Y E C + +I  H   +              D
Sbjct: 121 INERKSISKPDRQQMIGCDTRNLSS---YVENCYENMI--HCTKMLE------------D 163

Query: 707 KNDPVEFYDFLQVNTDSNRSEVINHARNXXXXXXXXARKQMKDEAGNPFIDFLS 868
           +  PVEFYDFL VNTDSNRSEVI+HAR         A    + +AG P+ +F S
Sbjct: 164 RTQPVEFYDFLNVNTDSNRSEVIDHARRDDEEVEQEAMDH-QSKAG-PYFEFTS 215


>ref|XP_002309771.1| predicted protein [Populus trichocarpa] gi|222852674|gb|EEE90221.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  290 bits (743), Expect = 3e-76
 Identities = 151/249 (60%), Positives = 183/249 (73%), Gaps = 9/249 (3%)
 Frame = +2

Query: 173 MCTRGHWRPAEDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFT 352
           M +RGHWR AEDEKL ELVE YGPHNWN+IAEKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MSSRGHWRLAEDEKLLELVEQYGPHNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 353 EEEEERLLASHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSL 532
           EEEEERLLA HRIHGN+W++IA+ FPGRTDNAVKNHWHVIMARRCRERS+ +AKRA+ SL
Sbjct: 61  EEEEERLLACHRIHGNKWAVIAKQFPGRTDNAVKNHWHVIMARRCRERSKIHAKRASPSL 120

Query: 533 I--SGRKSVSKHDMG-MKIEHRNH--SSIREYYERCSD----PIIYNHHANLKNIYSPVP 685
           +    + S S  D+  M  E RN+  S + +Y+E   D    P   N+ +  K++YS  P
Sbjct: 121 LVNEQKPSFSNQDVRIMNCEPRNNAPSFVHKYFESYCDHYHHPFTRNYTSICKDLYSQNP 180

Query: 686 NYSPAIDKNDPVEFYDFLQVNTDSNRSEVINHARNXXXXXXXXARKQMKDEAGNPFIDFL 865
           ++     KN P+EFYDFLQV T+S++SEVI++AR         A++  K  AG PFIDFL
Sbjct: 181 SHCEG--KNQPLEFYDFLQVKTESSKSEVIDNARRDDVEVDQEAKELPKSRAGFPFIDFL 238

Query: 866 SIGSS*SEL 892
           S G+  S L
Sbjct: 239 SAGNQVSGL 247


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