BLASTX nr result

ID: Coptis23_contig00002750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002750
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268717.2| PREDICTED: UDP-N-acetylglucosamine transport...   409   e-112
ref|XP_002310563.1| predicted protein [Populus trichocarpa] gi|2...   396   e-108
gb|AAL57713.1| AT5g65000/MXK3_23 [Arabidopsis thaliana]               393   e-107
ref|NP_569004.1| Nucleotide-sugar transporter family protein [Ar...   393   e-107
ref|XP_003531350.1| PREDICTED: UDP-N-acetylglucosamine transport...   392   e-107

>ref|XP_002268717.2| PREDICTED: UDP-N-acetylglucosamine transporter-like [Vitis
           vinifera] gi|296084745|emb|CBI25889.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score =  409 bits (1052), Expect = e-112
 Identities = 212/303 (69%), Positives = 242/303 (79%)
 Frame = -3

Query: 909 KVWXXXXXXXXXXXXXXXLSRRCIRKEVIVTSSVLACEMAKVICALFLLAKEGRLIYLCN 730
           +VW               +S+R IR+EVIVTSSVL CE+AKVICALFL+A+ G L  L N
Sbjct: 19  RVWLYLVLLTLQYGAQPLISKRFIRREVIVTSSVLTCEVAKVICALFLIARGGGLKKLYN 78

Query: 729 EWTLMGSLTASVLPAAIYALQNSLLQISYRNLDSLTFSILNQTKLLFTAFFTYLILRKKQ 550
           EWTL+GSLTAS LPAAIYALQNSLLQISY+NLDSLTFS+LNQTKL FTA FTY+ILR+KQ
Sbjct: 79  EWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSMLNQTKLFFTALFTYIILRQKQ 138

Query: 549 SPEQXXXXXXXXXXXXXXXXXXXXXXXXXXSDPDRIMFQGIIPVLVASVLSGLASALCQW 370
           S +Q                          S+PD+I+F GI+PVLVASVLSGLASALCQW
Sbjct: 139 STQQIGALFLLIIAAVLLSIGEGSSKGSSGSNPDQILFHGIVPVLVASVLSGLASALCQW 198

Query: 369 ASQVKNRTSYLMTVEMSIVGSLCLLASTYKSPDGEAIKQHGFFYGWTAITWIPVISNAVG 190
           ASQVK  TSY+MT+EMS+VGSLCLLASTYKSPDG+AI+QHGFFYGWT +T IPVI NAVG
Sbjct: 199 ASQVKKHTSYMMTIEMSVVGSLCLLASTYKSPDGKAIRQHGFFYGWTPLTLIPVIFNAVG 258

Query: 189 GILVGLVTAHAGGVRKGFVIVSALLVTAMLQFVFDGKPPSSYCLLALPFVISSICIYQKF 10
           GILVGLVT++AGGVRKGFVIVSALLVTA+LQF+FDGKPPS YC+LALP VI+SI IYQK+
Sbjct: 259 GILVGLVTSYAGGVRKGFVIVSALLVTALLQFIFDGKPPSFYCILALPLVITSISIYQKY 318

Query: 9   PYR 1
           PYR
Sbjct: 319 PYR 321


>ref|XP_002310563.1| predicted protein [Populus trichocarpa] gi|222853466|gb|EEE91013.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  396 bits (1018), Expect = e-108
 Identities = 203/303 (66%), Positives = 242/303 (79%)
 Frame = -3

Query: 909 KVWXXXXXXXXXXXXXXXLSRRCIRKEVIVTSSVLACEMAKVICALFLLAKEGRLIYLCN 730
           +VW               +S+R  R+EVIVT+SVL CE+AKV+CAL L+ ++G L  + +
Sbjct: 19  RVWLYSVLLTLQYGAQPLISKRFTRREVIVTTSVLTCELAKVVCALVLMVRDGSLKKMFS 78

Query: 729 EWTLMGSLTASVLPAAIYALQNSLLQISYRNLDSLTFSILNQTKLLFTAFFTYLILRKKQ 550
           +WTL+GSLTAS LPAAIYALQNSLLQISY+NLDSLTFSILNQTK++FTAFFTY++LR+KQ
Sbjct: 79  QWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSILNQTKIIFTAFFTYIMLRQKQ 138

Query: 549 SPEQXXXXXXXXXXXXXXXXXXXXXXXXXXSDPDRIMFQGIIPVLVASVLSGLASALCQW 370
           S +Q                          SDP++I+F GIIPVLVASVLSGLASALCQW
Sbjct: 139 SIQQIGALLLLIMAAVLLSIGEGSSKGSSSSDPEQILFYGIIPVLVASVLSGLASALCQW 198

Query: 369 ASQVKNRTSYLMTVEMSIVGSLCLLASTYKSPDGEAIKQHGFFYGWTAITWIPVISNAVG 190
           ASQVK  +SYLMTVEMSIVGSLCLLAST KSPDGEAI+QHG+FYGWT +T IPV++NA+G
Sbjct: 199 ASQVKKHSSYLMTVEMSIVGSLCLLASTTKSPDGEAIRQHGYFYGWTPLTMIPVVANALG 258

Query: 189 GILVGLVTAHAGGVRKGFVIVSALLVTAMLQFVFDGKPPSSYCLLALPFVISSICIYQKF 10
           GILVGLVT++AGGVRKGFVIVSALLVTA+LQF+F+GKPPS YCL+ALP V+SSI IYQK+
Sbjct: 259 GILVGLVTSYAGGVRKGFVIVSALLVTALLQFMFEGKPPSVYCLVALPLVMSSISIYQKY 318

Query: 9   PYR 1
           PYR
Sbjct: 319 PYR 321


>gb|AAL57713.1| AT5g65000/MXK3_23 [Arabidopsis thaliana]
          Length = 325

 Score =  393 bits (1009), Expect = e-107
 Identities = 203/283 (71%), Positives = 231/283 (81%)
 Frame = -3

Query: 852 SRRCIRKEVIVTSSVLACEMAKVICALFLLAKEGRLIYLCNEWTLMGSLTASVLPAAIYA 673
           S+RCIRK+VIVTSSVL CE+ KVICAL L+A+ G L  L  EWTLMGSLTAS LPAAIYA
Sbjct: 35  SKRCIRKDVIVTSSVLTCEIVKVICALILMARNGSLKGLAKEWTLMGSLTASGLPAAIYA 94

Query: 672 LQNSLLQISYRNLDSLTFSILNQTKLLFTAFFTYLILRKKQSPEQXXXXXXXXXXXXXXX 493
           LQNSLLQISYR+LDSLTFSILNQTK+ FTAFFT++ILR+KQS  Q               
Sbjct: 95  LQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIILRQKQSILQIGALCLLIMAAVLLS 154

Query: 492 XXXXXXXXXXXSDPDRIMFQGIIPVLVASVLSGLASALCQWASQVKNRTSYLMTVEMSIV 313
                       + D+ +F GIIPVL ASVLSGLAS+LCQWASQVK  +SYLMTVEMSIV
Sbjct: 155 VGEGSNKDSSGINADQKLFYGIIPVLAASVLSGLASSLCQWASQVKKHSSYLMTVEMSIV 214

Query: 312 GSLCLLASTYKSPDGEAIKQHGFFYGWTAITWIPVISNAVGGILVGLVTAHAGGVRKGFV 133
           GSLCLL ST KSPDGEAIK++GFF+GWTA+T +PVISNA+GGILVGLVT+HAGGVRKGFV
Sbjct: 215 GSLCLLVSTLKSPDGEAIKKYGFFHGWTALTLVPVISNALGGILVGLVTSHAGGVRKGFV 274

Query: 132 IVSALLVTAMLQFVFDGKPPSSYCLLALPFVISSICIYQKFPY 4
           IVSALLVTA+LQF F+GKPPSSYCL+ALP V+SSI +YQK+PY
Sbjct: 275 IVSALLVTALLQFAFEGKPPSSYCLVALPLVMSSISMYQKYPY 317


>ref|NP_569004.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]
           gi|75155718|sp|Q8LES0.1|CSTR5_ARATH RecName:
           Full=CMP-sialic acid transporter 5; Short=CMP-SA-Tr 5;
           Short=CMP-Sia-Tr 5 gi|21553407|gb|AAM62500.1| unknown
           [Arabidopsis thaliana] gi|110742240|dbj|BAE99046.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|124300990|gb|ABN04747.1| At5g65000 [Arabidopsis
           thaliana] gi|332010598|gb|AED97981.1| Nucleotide-sugar
           transporter family protein [Arabidopsis thaliana]
          Length = 325

 Score =  393 bits (1009), Expect = e-107
 Identities = 203/283 (71%), Positives = 231/283 (81%)
 Frame = -3

Query: 852 SRRCIRKEVIVTSSVLACEMAKVICALFLLAKEGRLIYLCNEWTLMGSLTASVLPAAIYA 673
           S+RCIRK+VIVTSSVL CE+ KVICAL L+A+ G L  L  EWTLMGSLTAS LPAAIYA
Sbjct: 35  SKRCIRKDVIVTSSVLTCEIVKVICALILMARNGSLKGLAKEWTLMGSLTASGLPAAIYA 94

Query: 672 LQNSLLQISYRNLDSLTFSILNQTKLLFTAFFTYLILRKKQSPEQXXXXXXXXXXXXXXX 493
           LQNSLLQISYR+LDSLTFSILNQTK+ FTAFFT++ILR+KQS  Q               
Sbjct: 95  LQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIILRQKQSILQIGALCLLIMAAVLLS 154

Query: 492 XXXXXXXXXXXSDPDRIMFQGIIPVLVASVLSGLASALCQWASQVKNRTSYLMTVEMSIV 313
                       + D+ +F GIIPVL ASVLSGLAS+LCQWASQVK  +SYLMTVEMSIV
Sbjct: 155 VGEGSNKDSSGINADQKLFYGIIPVLAASVLSGLASSLCQWASQVKKHSSYLMTVEMSIV 214

Query: 312 GSLCLLASTYKSPDGEAIKQHGFFYGWTAITWIPVISNAVGGILVGLVTAHAGGVRKGFV 133
           GSLCLL ST KSPDGEAIK++GFF+GWTA+T +PVISNA+GGILVGLVT+HAGGVRKGFV
Sbjct: 215 GSLCLLVSTLKSPDGEAIKKYGFFHGWTALTLVPVISNALGGILVGLVTSHAGGVRKGFV 274

Query: 132 IVSALLVTAMLQFVFDGKPPSSYCLLALPFVISSICIYQKFPY 4
           IVSALLVTA+LQF F+GKPPSSYCL+ALP V+SSI +YQK+PY
Sbjct: 275 IVSALLVTALLQFAFEGKPPSSYCLVALPLVMSSISMYQKYPY 317


>ref|XP_003531350.1| PREDICTED: UDP-N-acetylglucosamine transporter-like [Glycine max]
          Length = 327

 Score =  392 bits (1008), Expect = e-107
 Identities = 201/284 (70%), Positives = 231/284 (81%)
 Frame = -3

Query: 852 SRRCIRKEVIVTSSVLACEMAKVICALFLLAKEGRLIYLCNEWTLMGSLTASVLPAAIYA 673
           S+R IR+EVIVTSSVL CE+AKVICA+F +AK+G L  L  EWTL+G+LTAS LPAAIYA
Sbjct: 38  SKRFIRREVIVTSSVLTCELAKVICAVFFMAKDGSLRKLYKEWTLVGALTASGLPAAIYA 97

Query: 672 LQNSLLQISYRNLDSLTFSILNQTKLLFTAFFTYLILRKKQSPEQXXXXXXXXXXXXXXX 493
           LQNSLLQISY+NLDSLTFS+LNQTK+ FTA F Y ILR+KQS EQ               
Sbjct: 98  LQNSLLQISYKNLDSLTFSMLNQTKIFFTALFAYFILRQKQSIEQIGALFLLIVAAVLLS 157

Query: 492 XXXXXXXXXXXSDPDRIMFQGIIPVLVASVLSGLASALCQWASQVKNRTSYLMTVEMSIV 313
                       + D+I+F GIIPVLVASVLSGLAS+LCQWASQVK  +SYLMT+EMSIV
Sbjct: 158 VGEGSTKGSAIGNADQILFYGIIPVLVASVLSGLASSLCQWASQVKKHSSYLMTIEMSIV 217

Query: 312 GSLCLLASTYKSPDGEAIKQHGFFYGWTAITWIPVISNAVGGILVGLVTAHAGGVRKGFV 133
           GSLCLLAST KSPDGEA++QHGFFYGWT +T IPVI NA+GGILVGLVT+HAGGVRKGFV
Sbjct: 218 GSLCLLASTLKSPDGEAMRQHGFFYGWTPLTLIPVIFNALGGILVGLVTSHAGGVRKGFV 277

Query: 132 IVSALLVTAMLQFVFDGKPPSSYCLLALPFVISSICIYQKFPYR 1
           IVSALL+TA+LQF+FDGK PS YCLLALP V++SI IYQK+PY+
Sbjct: 278 IVSALLITALLQFIFDGKTPSLYCLLALPLVVTSISIYQKYPYQ 321


Top