BLASTX nr result

ID: Coptis23_contig00002749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002749
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619768.1| Zinc finger CCCH domain-containing protein [...    75   3e-11
ref|XP_002528790.1| protein binding protein, putative [Ricinus c...    71   4e-10
ref|XP_004167295.1| PREDICTED: uncharacterized protein At5g08430...    70   9e-10
ref|XP_004148294.1| PREDICTED: uncharacterized protein At5g08430...    70   9e-10
ref|XP_002877789.1| hypothetical protein ARALYDRAFT_906461 [Arab...    70   9e-10

>ref|XP_003619768.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355494783|gb|AES75986.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 745

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = -2

Query: 564 ENPESEIWHYVDPSGIPRGPFTMSKLRKWDSQEFFYPNFKVWKAGQSQEEAIFLEDALRR 385
           ENP S  W+Y+DP G  +GPF +  L+ W+   +F P+FKVWKAGQ+Q++++ L D L +
Sbjct: 576 ENPHSSTWNYIDPQGNVQGPFPLFSLKCWNDSRYFSPDFKVWKAGQTQDQSVLLVDILSK 635

Query: 384 IYS*GRS 364
            +  G S
Sbjct: 636 YFPVGPS 642


>ref|XP_002528790.1| protein binding protein, putative [Ricinus communis]
           gi|223531793|gb|EEF33612.1| protein binding protein,
           putative [Ricinus communis]
          Length = 502

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -2

Query: 567 DENPESEIWHYVDPSGIPRGPFTMSKLRKWDSQEFFYPNFKVWKAGQSQEEAIFLEDALR 388
           D +  S +WHY DP G  +GPF+++ L++W   ++F PNFKVW  GQS+++AI L D L 
Sbjct: 438 DHDVGSFMWHYADPQGDVQGPFSIASLKRWSDADYFPPNFKVWMTGQSRKDAISLSDILH 497

Query: 387 RI 382
            I
Sbjct: 498 SI 499


>ref|XP_004167295.1| PREDICTED: uncharacterized protein At5g08430-like, partial [Cucumis
           sativus]
          Length = 220

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
 Frame = -2

Query: 738 ENTDEKAV-KDPGAGLEVSNVFVAGTQVESVRETQVALHENEGHQGPPPVLIDLDNDKDE 562
           ENT+ + +  D  A   V   +    + E +         NE  Q     +IDL +D DE
Sbjct: 91  ENTESRQIFLDEQAAQPVECTYNYFIESEPINAVDKGCQANE--QIKESTVIDLSDD-DE 147

Query: 561 NPESE-----------IWHYVDPSGIPRGPFTMSKLRKWDSQEFFYPNFKVWKAGQSQEE 415
            P +E           IW+Y+DP G  +GPF ++ L+ W    +F  +FKVW+ GQ+Q++
Sbjct: 148 PPRAEEHDWNNKLKSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQ 207

Query: 414 AIFLEDALRRIYS 376
           A+ L D L   +S
Sbjct: 208 AVLLNDILSPFFS 220


>ref|XP_004148294.1| PREDICTED: uncharacterized protein At5g08430-like [Cucumis sativus]
          Length = 543

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
 Frame = -2

Query: 738 ENTDEKAV-KDPGAGLEVSNVFVAGTQVESVRETQVALHENEGHQGPPPVLIDLDNDKDE 562
           ENT+ + +  D  A   V   +    + E +         NE  Q     +IDL +D DE
Sbjct: 414 ENTESRQIFLDEQAAQPVECTYNYFIESEPINAVDKGCQANE--QIKESTVIDLSDD-DE 470

Query: 561 NPESE-----------IWHYVDPSGIPRGPFTMSKLRKWDSQEFFYPNFKVWKAGQSQEE 415
            P +E           IW+Y+DP G  +GPF ++ L+ W    +F  +FKVW+ GQ+Q++
Sbjct: 471 PPRAEEHDWNNKLKSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQ 530

Query: 414 AIFLEDALRRIYS 376
           A+ L D L   +S
Sbjct: 531 AVLLNDILSPFFS 543


>ref|XP_002877789.1| hypothetical protein ARALYDRAFT_906461 [Arabidopsis lyrata subsp.
           lyrata] gi|297323627|gb|EFH54048.1| hypothetical protein
           ARALYDRAFT_906461 [Arabidopsis lyrata subsp. lyrata]
          Length = 1292

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 28/58 (48%), Positives = 43/58 (74%)
 Frame = -2

Query: 564 ENPESEIWHYVDPSGIPRGPFTMSKLRKWDSQEFFYPNFKVWKAGQSQEEAIFLEDAL 391
           ++ ESEIWHY DP+G  +GPF+M +LR+W S   F P  ++W+A ++Q+E++ L DAL
Sbjct: 712 DDEESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLTDAL 769


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