BLASTX nr result

ID: Coptis23_contig00002748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002748
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514063.1| conserved hypothetical protein [Ricinus comm...    82   7e-14
ref|XP_002279935.1| PREDICTED: uncharacterized protein LOC100243...    77   3e-12
ref|XP_002330483.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]       75   1e-11
gb|ABK94669.1| unknown [Populus trichocarpa]                           75   1e-11

>ref|XP_002514063.1| conserved hypothetical protein [Ricinus communis]
           gi|223546519|gb|EEF48017.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 54/113 (47%), Positives = 60/113 (53%)
 Frame = +1

Query: 166 PITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXXRLQVNASLKEKXXXXXXXXXXX 345
           PITSAS K +PSS  AFFKPLP+RQ             + QV ASLKEK           
Sbjct: 12  PITSASQKKVPSSE-AFFKPLPLRQSKAVMASKSNG--KFQVKASLKEKAITGLTAAALT 68

Query: 346 XXXXIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXSNFDPVKRT 504
               IPEVA+AA SGVSPSLKNFLLS                  +NFDPVKR+
Sbjct: 69  ASMVIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDPVKRS 121


>ref|XP_002279935.1| PREDICTED: uncharacterized protein LOC100243957 [Vitis vinifera]
          Length = 123

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 48/113 (42%), Positives = 57/113 (50%)
 Frame = +1

Query: 166 PITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXXRLQVNASLKEKXXXXXXXXXXX 345
           P+TSA+   L   S AFF+PLPVR              + +V ASLKEK           
Sbjct: 12  PMTSATQTRL-QGSEAFFRPLPVRPSKSMAAASSKSSGKFEVRASLKEKAVTGLTAAALA 70

Query: 346 XXXXIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXSNFDPVKRT 504
               IPEVA+AADSG+SPSLKNFLLS                  +NFDPVKR+
Sbjct: 71  ASMVIPEVAEAADSGLSPSLKNFLLSIAAGGVVLVVIVGAVIGVANFDPVKRS 123


>ref|XP_002330483.1| predicted protein [Populus trichocarpa] gi|222872417|gb|EEF09548.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 50/113 (44%), Positives = 55/113 (48%)
 Frame = +1

Query: 166 PITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXXRLQVNASLKEKXXXXXXXXXXX 345
           P+T AS K  P+S  AFFKPLPVR              R QV ASLKEK           
Sbjct: 12  PLTHASRKAAPTSE-AFFKPLPVRPSKAIAAASRCNG-RFQVKASLKEKVVTGLTAGALT 69

Query: 346 XXXXIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXSNFDPVKRT 504
               IPEVA+AA  GVSPSL NFLLS                  SNFDPV+R+
Sbjct: 70  VSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLAAIAGAVVGVSNFDPVRRS 122


>gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 121

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 50/112 (44%), Positives = 55/112 (49%)
 Frame = +1

Query: 166 PITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXXRLQVNASLKEKXXXXXXXXXXX 345
           P+T AS K +P+S  AFFKPLP R              R QV ASLKEK           
Sbjct: 12  PLTYASQKRVPASE-AFFKPLPARPSKAMSASKSSG--RFQVKASLKEKLVTGLTAGALT 68

Query: 346 XXXXIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXSNFDPVKR 501
               IPEVA+AA +G SPSLKNFLLS                  SNFDPVKR
Sbjct: 69  ASMVIPEVAEAAGAGTSPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120


>gb|ABK94669.1| unknown [Populus trichocarpa]
          Length = 121

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 50/112 (44%), Positives = 55/112 (49%)
 Frame = +1

Query: 166 PITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXXRLQVNASLKEKXXXXXXXXXXX 345
           P+T AS K +P+S  AFFKPLP R              R QV ASLKEK           
Sbjct: 12  PLTYASQKRVPASE-AFFKPLPARPSKAMSASKSSG--RFQVKASLKEKLVTGLTAGALT 68

Query: 346 XXXXIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXSNFDPVKR 501
               IPEVA+AA +G SPSLKNFLLS                  SNFDPVKR
Sbjct: 69  ASMVIPEVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120


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