BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002742
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...   657   0.0  
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...   634   e-179
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   628   e-177
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...   626   e-177
ref|NP_001241950.1| uncharacterized protein LOC100786194 [Glycin...   608   e-171

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
            [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
            protein product [Vitis vinifera]
          Length = 410

 Score =  657 bits (1694), Expect = 0.0
 Identities = 317/410 (77%), Positives = 369/410 (90%)
 Frame = -2

Query: 1466 MTTIVITSEEDPSLSIVRFTSELAWADAGPEVAEPQVARLCMEAQEFIVMGKWLELTSLL 1287
            MTT+V TSEEDP+LS+VR+T+E++WADAGPEVAEPQV RLCMEAQE +V G+WL+L SL+
Sbjct: 1    MTTLVPTSEEDPALSVVRYTAEISWADAGPEVAEPQVTRLCMEAQECMVRGRWLDLASLM 60

Query: 1286 LTSADLVFSKVSDKDLECIFTIICNLVTKSESLDEALEMAKLISAKVTQQPNDKPALRLK 1107
            LTSADL+FSK SDKDLECIFT+ICNLVTKSES DEALEMAK ISAK+TQQPNDK ALRLK
Sbjct: 61   LTSADLMFSKASDKDLECIFTVICNLVTKSESPDEALEMAKFISAKITQQPNDKAALRLK 120

Query: 1106 ILFNLYNLLVNPYSKFYVYMKALSLAVNGKVSEHIVPSFKKIDSFLREWNVGTLDQRELF 927
            ILFNLYNLL NPYS+FYVYMKAL+LAVNGKV+EHI+PSFK +DSFL+EWN+G LDQR L+
Sbjct: 121  ILFNLYNLLENPYSRFYVYMKALNLAVNGKVTEHIIPSFKMMDSFLKEWNIGILDQRALY 180

Query: 926  LTISNILKENKSSAKDSFYFLTKYLATFSGEDVHAIGEAKEEAVSAIVEFVKAPDVFQCD 747
            L ISNILKENKS  KD F FLTKYLATFSGED + + EAKEEAV  I+EFV+APD+FQCD
Sbjct: 181  LNISNILKENKSLGKDYFKFLTKYLATFSGEDAYTMSEAKEEAVRTIMEFVRAPDMFQCD 240

Query: 746  LLEMPAVSQLEKDGKYSLVYQLLKIFLTQRLDSYLDFQAANSSLLKTYGIVHDDCITKMR 567
            LL+MPAV QLEKD KY+LVYQLLKIFLTQRLD+YLDF AANS+LLK+YG+VH+DCITKMR
Sbjct: 241  LLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYLDFHAANSTLLKSYGLVHEDCITKMR 300

Query: 566  LMSLADLGSNDSGEIPYSVIRDELKLADDEVEQWVVKAITAKIFDCKMDQMNEIVIVSRC 387
            LMSL DLGS++S +IPYS+I+D L++ DDEVE WVVKAIT K+ DCKMDQMN++V+VSRC
Sbjct: 301  LMSLVDLGSDESCQIPYSLIKDTLRIDDDEVELWVVKAITVKLMDCKMDQMNQVVLVSRC 360

Query: 386  TERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 237
            +ERVFG  QWQNL+SKL TWRGNIANV +TI+ NK++ED S  MQGLT+R
Sbjct: 361  SERVFGQQQWQNLRSKLLTWRGNIANVINTIQANKISEDGSQAMQGLTIR 410


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M-like
            [Cucumis sativus]
          Length = 410

 Score =  634 bits (1636), Expect = e-179
 Identities = 306/410 (74%), Positives = 360/410 (87%)
 Frame = -2

Query: 1466 MTTIVITSEEDPSLSIVRFTSELAWADAGPEVAEPQVARLCMEAQEFIVMGKWLELTSLL 1287
            M T+V TSEED +L++VRF SELAWADAGPE AEPQV RLC+EAQE +V+G+WL+L SL+
Sbjct: 1    MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 1286 LTSADLVFSKVSDKDLECIFTIICNLVTKSESLDEALEMAKLISAKVTQQPNDKPALRLK 1107
            LTSADL+FSKVS+KDLEC+FTIICNLVTK+ S DE+LEMAKLISAK+ QQPNDKPALRLK
Sbjct: 61   LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 1106 ILFNLYNLLVNPYSKFYVYMKALSLAVNGKVSEHIVPSFKKIDSFLREWNVGTLDQRELF 927
            ILFNLYNLL NPYS+F+VYMKAL LA  GK  EHI+P+ KKI+SFLREWN+G ++QRELF
Sbjct: 121  ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 926  LTISNILKENKSSAKDSFYFLTKYLATFSGEDVHAIGEAKEEAVSAIVEFVKAPDVFQCD 747
            L ISN+LKE+KSSA D F FLTKYLATFSGED   + EAKEEAV AIVEFVKAP++F+CD
Sbjct: 181  LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 746  LLEMPAVSQLEKDGKYSLVYQLLKIFLTQRLDSYLDFQAANSSLLKTYGIVHDDCITKMR 567
            LL+MPAV QLEKD KYSLVYQLLKIFLTQRLD+Y++FQA NSSLLK+YG+VH+DCI KMR
Sbjct: 241  LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 566  LMSLADLGSNDSGEIPYSVIRDELKLADDEVEQWVVKAITAKIFDCKMDQMNEIVIVSRC 387
            L+SL DLGSN+S  IPY++I+D L++ DDEVE WVVKAIT+K+ DCKMDQMNE+VIVSRC
Sbjct: 301  LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 386  TERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 237
            T+RVFG +QW+ L++KLTTWRGNIANV  TI  NK+ ED S  MQGL +R
Sbjct: 361  TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
            factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score =  628 bits (1619), Expect = e-177
 Identities = 306/417 (73%), Positives = 360/417 (86%), Gaps = 7/417 (1%)
 Frame = -2

Query: 1466 MTTIVITSEEDPSLSIVRFTSELAWADAGPEVAEPQVARLCMEAQEFIVMGKWLELTSLL 1287
            M T+V TSEED +L++VRF SELAWADAGPE AEPQV RLC+EAQE +V+G+WL+L SL+
Sbjct: 1    MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 1286 LTSADLVFSKVSDKDLECIFTIICNLVTKSESLDEALEMAKLISAKVTQQPNDKPALRLK 1107
            LTSADL+FSKVS+KDLEC+FTIICNLVTK+ S DE+LEMAKLISAK+ QQPNDKPALRLK
Sbjct: 61   LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 1106 ILFNLYNLLVNPYSKFYVYMKALSLAVNGKVSEHIVPSFKKIDSFLREWNVGTLDQRELF 927
            ILFNLYNLL NPYS+F+VYMKAL LA  GK  EHI+P+ KKI+SFLREWN+G ++QRELF
Sbjct: 121  ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 926  LTISNILKENKSSAKDSFYFLTKYLATFSGEDVHAIGEAKEEAVSAIVEFVKAPDVFQCD 747
            L ISN+LKE+KSSA D F FLTKYLATFSGED   + EAKEEAV AIVEFVKAP++F+CD
Sbjct: 181  LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 746  LLEMPAVSQLEKDGKYSLVYQLLKIFLTQRLDSYLDFQAANSSLLKTYGIVHDDCITKMR 567
            LL+MPAV QLEKD KYSLVYQLLKIFLTQRLD+Y++FQA NSSLLK+YG+VH+DCI KMR
Sbjct: 241  LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 566  LMSLADLGSNDSGEIPYSVIRDELK-------LADDEVEQWVVKAITAKIFDCKMDQMNE 408
            L+SL DLGSN+S  IPY++I+D L+       + DDEVE WVVKAIT+K+ DCKMDQMNE
Sbjct: 301  LLSLVDLGSNESARIPYALIKDTLRXKKKLSQINDDEVELWVVKAITSKLIDCKMDQMNE 360

Query: 407  IVIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 237
            +VIVSRCT+RVFG +QW+ L++KLTTWRGNIANV  TI  NK+ ED S  MQGL +R
Sbjct: 361  VVIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 417


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
            gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
            putative [Ricinus communis]
          Length = 412

 Score =  626 bits (1615), Expect = e-177
 Identities = 304/412 (73%), Positives = 364/412 (88%), Gaps = 2/412 (0%)
 Frame = -2

Query: 1466 MTTIVITSEEDPSLSIVRFTSELAWADAGPEVAEPQVARLCMEAQEFIVMGKWLELTSLL 1287
            MTT+V TSEEDP+L++VRFTSELAWADAGPEVAE QV+RLC+EAQE +V+G+WL+L SL+
Sbjct: 1    MTTVVPTSEEDPALAVVRFTSELAWADAGPEVAEQQVSRLCVEAQECMVIGRWLDLASLI 60

Query: 1286 LTSADLVFS--KVSDKDLECIFTIICNLVTKSESLDEALEMAKLISAKVTQQPNDKPALR 1113
            LTSAD++FS  KVS+KDLECIFT+ICNLVTK +S DEALEMAKLI  K+ QQP DKPALR
Sbjct: 61   LTSADVIFSNSKVSEKDLECIFTVICNLVTKPDSPDEALEMAKLICGKIIQQPADKPALR 120

Query: 1112 LKILFNLYNLLVNPYSKFYVYMKALSLAVNGKVSEHIVPSFKKIDSFLREWNVGTLDQRE 933
            LKILFNLYNLL +PYS+FYVY+KAL LA+NGKV+EH+VPSFK I+SFL+EWN+   DQRE
Sbjct: 121  LKILFNLYNLLESPYSRFYVYLKALDLALNGKVTEHMVPSFKTIESFLKEWNLEVKDQRE 180

Query: 932  LFLTISNILKENKSSAKDSFYFLTKYLATFSGEDVHAIGEAKEEAVSAIVEFVKAPDVFQ 753
            LFL+ISN+L+E+KSS KDSF FLTKYLATF+GED +A+GEAKEEAV  I+EFVK+PD+FQ
Sbjct: 181  LFLSISNVLRESKSSGKDSFKFLTKYLATFAGEDAYAMGEAKEEAVRTIIEFVKSPDMFQ 240

Query: 752  CDLLEMPAVSQLEKDGKYSLVYQLLKIFLTQRLDSYLDFQAANSSLLKTYGIVHDDCITK 573
            CDLL+MPAV QLEKDGKY+LVYQLLKIFLTQRLD+YL+FQ ANS+LLK+Y +VH+DCI K
Sbjct: 241  CDLLDMPAVGQLEKDGKYALVYQLLKIFLTQRLDAYLEFQTANSALLKSYDLVHEDCIAK 300

Query: 572  MRLMSLADLGSNDSGEIPYSVIRDELKLADDEVEQWVVKAITAKIFDCKMDQMNEIVIVS 393
            MRLMSL DL  ++SG IPY++I+D L++ DDEVE WVVKAITAK+ +CKMDQMNE+VIVS
Sbjct: 301  MRLMSLLDLSLDESGRIPYTLIKDTLRINDDEVELWVVKAITAKLINCKMDQMNEVVIVS 360

Query: 392  RCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 237
             CTERVFG +QWQ L+SKL TWR N+ NV +TI+ NKV ED S  MQGL +R
Sbjct: 361  SCTERVFGQHQWQKLRSKLATWRDNVTNVINTIQANKVTEDGSQAMQGLMIR 412


>ref|NP_001241950.1| uncharacterized protein LOC100786194 [Glycine max]
            gi|255644746|gb|ACU22875.1| unknown [Glycine max]
          Length = 410

 Score =  608 bits (1567), Expect = e-171
 Identities = 294/410 (71%), Positives = 358/410 (87%)
 Frame = -2

Query: 1466 MTTIVITSEEDPSLSIVRFTSELAWADAGPEVAEPQVARLCMEAQEFIVMGKWLELTSLL 1287
            MTT+V TSEED +LS+VRF SELAWADAGPEVAEPQV+ LCMEA+EFIVMGKWLEL SL+
Sbjct: 1    MTTVVPTSEEDAALSVVRFASELAWADAGPEVAEPQVSGLCMEAEEFIVMGKWLELASLM 60

Query: 1286 LTSADLVFSKVSDKDLECIFTIICNLVTKSESLDEALEMAKLISAKVTQQPNDKPALRLK 1107
            +TSA+LVFSKVS+ D+E IFTIICNLVTK+E+ DE +E+ K+I+AK+ QQPN+KPA+RLK
Sbjct: 61   ITSAELVFSKVSETDIESIFTIICNLVTKTENPDEVMEIVKVITAKIIQQPNEKPAVRLK 120

Query: 1106 ILFNLYNLLVNPYSKFYVYMKALSLAVNGKVSEHIVPSFKKIDSFLREWNVGTLDQRELF 927
             L NLYNLL  PY +FYVYMKAL+LAVNGKV+E+I+PSFKKIDSFL+EW +G  +QRELF
Sbjct: 121  TLINLYNLLETPYCQFYVYMKALNLAVNGKVTEYIIPSFKKIDSFLKEWKIGIPEQRELF 180

Query: 926  LTISNILKENKSSAKDSFYFLTKYLATFSGEDVHAIGEAKEEAVSAIVEFVKAPDVFQCD 747
            LTISNILKENKS +KD+F FL+ YL+TFSGED H + EAKEEA  AIVEFV+APD++QCD
Sbjct: 181  LTISNILKENKSMSKDAFKFLSNYLSTFSGEDAHVLSEAKEEAARAIVEFVRAPDIYQCD 240

Query: 746  LLEMPAVSQLEKDGKYSLVYQLLKIFLTQRLDSYLDFQAANSSLLKTYGIVHDDCITKMR 567
            LL++PAV QLEKD KY+L+YQLLKIFLTQRLD+YL++QAANS+LLK YG+V ++CI+KMR
Sbjct: 241  LLDLPAVGQLEKDAKYALLYQLLKIFLTQRLDAYLEYQAANSTLLKNYGLVPEECISKMR 300

Query: 566  LMSLADLGSNDSGEIPYSVIRDELKLADDEVEQWVVKAITAKIFDCKMDQMNEIVIVSRC 387
            LMSL DL S+ SG+IPY++IRD L++ DDEVE WVV+AITAK+ DCKMDQM++ V+VS  
Sbjct: 301  LMSLMDLTSDGSGQIPYALIRDTLQINDDEVELWVVRAITAKLIDCKMDQMHQSVVVSHP 360

Query: 386  TERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 237
            T+RVFG +QWQ L++KL TWRGNIANV STI+ NK+ ED S   QGL VR
Sbjct: 361  TDRVFGQHQWQALRTKLATWRGNIANVISTIQANKITEDGSQAAQGLVVR 410