BLASTX nr result

ID: Coptis23_contig00002737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002737
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260...   132   7e-29
ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21
ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19
ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|2...    99   9e-19
ref|NP_187957.3| uncharacterized protein [Arabidopsis thaliana] ...    83   5e-14

>ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260500 [Vitis vinifera]
           gi|297746488|emb|CBI16544.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  132 bits (332), Expect = 7e-29
 Identities = 68/133 (51%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
 Frame = -2

Query: 421 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLEDTPNVPTTVSSVPDGVVQLSLETAEVEK 242
           MRVLF K+HCPSFICFCKPSPH+ +P PLKLE+ P+VP ++ S+PDG   LS +T EV+ 
Sbjct: 1   MRVLFCKIHCPSFICFCKPSPHIYTPGPLKLENNPHVPPSIVSIPDGENHLSGDTIEVKD 60

Query: 241 VSLDGKQEVEVVPXXXXXXXXSQAG--KEGEKGKVQWMDFFGKELAEIREFDAXXXXXXX 68
            S DGKQ  E +         S+ G  KE  K +VQWMDF GKEL EI+EF++       
Sbjct: 61  GSSDGKQPDENLLKTSLKKAPSEPGTPKEVGKKRVQWMDFLGKELVEIKEFESSETGDTD 120

Query: 67  XXXXSIRGCICVI 29
                 RGC+C+I
Sbjct: 121 TEAEDNRGCVCII 133


>ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|222842283|gb|EEE79830.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  107 bits (266), Expect = 3e-21
 Identities = 61/118 (51%), Positives = 76/118 (64%), Gaps = 7/118 (5%)
 Frame = -2

Query: 421 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLEDTPNVPTT-VSSVPDG------VVQLSL 263
           MRVLFSK+HCPSFICFCKPSP + +P PLKLE++P+VP+T V SV D       V+  S+
Sbjct: 1   MRVLFSKIHCPSFICFCKPSPSIYTPGPLKLENSPHVPSTAVISVADASSNDNHVLSDSI 60

Query: 262 ETAEVEKVSLDGKQEVEVVPXXXXXXXXSQAGKEGEKGKVQWMDFFGKELAEIREFDA 89
           E  E   V +DGKQ              +   KE +K KVQW+DF GKEL EIREF++
Sbjct: 61  EVKE-GSVGVDGKQPESQNSLKSSLKRAAFDSKEVDKKKVQWIDFLGKELVEIREFES 117


>ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|222846358|gb|EEE83905.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  101 bits (251), Expect = 2e-19
 Identities = 58/119 (48%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
 Frame = -2

Query: 424 FMRVLFSKLHCPSFICFCKPSPHLLSPIPLKLEDTPNVPTT-------VSSVPDGVVQLS 266
           FMRVLF K+HCP FICFCKPSP +  P PLKLE++P+VP+T        S   D V+  S
Sbjct: 17  FMRVLFCKIHCP-FICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDS 75

Query: 265 LETAEVEKVSLDGKQEVEVVPXXXXXXXXSQAGKEGEKGKVQWMDFFGKELAEIREFDA 89
           +E  E   V +DGKQ                  KE +K KV+WMDF GKEL EIREF++
Sbjct: 76  VEVKE-GSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIREFES 133


>ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|222839667|gb|EEE77990.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 57/118 (48%), Positives = 70/118 (59%), Gaps = 7/118 (5%)
 Frame = -2

Query: 421 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLEDTPNVPTT-------VSSVPDGVVQLSL 263
           MRVLF K+HCP FICFCKPSP +  P PLKLE++P+VP+T        S   D V+  S+
Sbjct: 1   MRVLFCKIHCP-FICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDSV 59

Query: 262 ETAEVEKVSLDGKQEVEVVPXXXXXXXXSQAGKEGEKGKVQWMDFFGKELAEIREFDA 89
           E  E   V +DGKQ                  KE +K KV+WMDF GKEL EIREF++
Sbjct: 60  EVKE-GSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIREFES 116


>ref|NP_187957.3| uncharacterized protein [Arabidopsis thaliana]
           gi|332641842|gb|AEE75363.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 172

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 59/161 (36%), Positives = 76/161 (47%), Gaps = 30/161 (18%)
 Frame = -2

Query: 421 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLEDT-PNVPTTVSSVP-------------- 287
           MRVL  K+ CPSFICFCKPSPH+ +   LKLE+T P V ++ + V               
Sbjct: 13  MRVLLCKIQCPSFICFCKPSPHIYASGSLKLENTFPQVSSSTTVVDDRDHDDNDDDDAHV 72

Query: 286 -------DGVVQLSLETAEVEKVSLDGKQEV-------EVVPXXXXXXXXSQA-GKEGEK 152
                  D V  L  E    E  +L+GK+E        E++           A G   EK
Sbjct: 73  EEEEVVVDHVDGLLTEVVREEDCALEGKKEEEESLSNGEILKSSLKKEVLDSADGGRKEK 132

Query: 151 GKVQWMDFFGKELAEIREFDAXXXXXXXXXXXSIRGCICVI 29
            KVQW+D  GKELAEIREF++             + C+CVI
Sbjct: 133 KKVQWVDLMGKELAEIREFESSEEEDVRYDGD--QSCVCVI 171


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