BLASTX nr result
ID: Coptis23_contig00002731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002731
(3043 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 1221 0.0
emb|CBI19841.3| unnamed protein product [Vitis vinifera] 1167 0.0
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co... 1139 0.0
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi... 1131 0.0
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g... 1131 0.0
>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 1221 bits (3158), Expect = 0.0
Identities = 628/936 (67%), Positives = 706/936 (75%), Gaps = 22/936 (2%)
Frame = -1
Query: 3043 SQVCDSNVITPGTQFMAVLSIALQYYIHQRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 2864
SQVCDSNVITPGT+FM VLS+ALQYYIH RLNNDPGWKSIKVILSDANVPGEGEHKIMSY
Sbjct: 152 SQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 211
Query: 2863 IRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFT-AQQDKCFLCGQIG 2687
IRLQRNLPGFDPNTRHCLYGLDADLIML LATHEVHFSILRE+VFT QQDKCF+CGQ+G
Sbjct: 212 IRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREIVFTPGQQDKCFMCGQMG 271
Query: 2686 HLAANCEGKAKRKFGQFDEKGEGSTLEKKPYQFLNIWTLREYLGYEMRIPNAPFEIDFER 2507
HLAA+CEGKAKRK G+FDEKG+ +++ KKPYQFLNIWTLREYL YEMRIPN PFEIDFE
Sbjct: 272 HLAADCEGKAKRKAGEFDEKGQSASVVKKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEH 331
Query: 2506 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLVAVYKKEFVAMGGYLTDSSKAILSRVE 2327
IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL+AVYKKE AMGGYLTDSSK LS VE
Sbjct: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKELRAMGGYLTDSSKPNLSNVE 391
Query: 2326 HFIQAVGCYEDKIFQKRARLHQRQADRIKREKGQTRRGDDVEPQFKPESLVPVAHYRGSR 2147
HFIQAVG YEDKIFQKRARLHQRQA+RIKREK Q RRGDD +PQ KPE LVPV+ Y GSR
Sbjct: 392 HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSR 451
Query: 2146 LSSAALPSPYQPKEYVHHSGSVVEKNEVGTSKGKRSDIRNNKVPR-SSEASVGAAIVEAE 1970
L+SA PSPYQ E ++ + GTS + KV R SS A+VGAAIVEAE
Sbjct: 452 LASAPTPSPYQQHE--------IKSKQSGTSGSQ-----GRKVARFSSGATVGAAIVEAE 498
Query: 1969 NSLEMETQENKEELKTKLKDLIREKSDLFNSSIQEEDKVKLGDPGWKERYYEEKFSAKSA 1790
N LE E +NK+ELK KLK+L+REKSDLFNS EEDKVKLG+ GWKERYYEEKFS K+
Sbjct: 499 NDLETELHDNKDELKAKLKELLREKSDLFNSKNPEEDKVKLGEAGWKERYYEEKFSTKTP 558
Query: 1789 DELEAIRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDIKGLDQLEINFELG 1610
+E EA+R DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD+K L QL I+FELG
Sbjct: 559 EEQEAMRNDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELG 618
Query: 1609 SPFKPFNQLMGVFPAASCHALPEHYRELMTSSSSPIVDFYPTDFEVDMNGKRFAWQGIAK 1430
SPFKPFNQL+GVFPAAS HALPE YR+LMT +SPI+DFYPTDFEVDMNGKRFAWQGIAK
Sbjct: 619 SPFKPFNQLLGVFPAASSHALPEEYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAK 678
Query: 1429 LPFIDEGRLLNEIGKVEHTLTEEEVRRNSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDK 1250
LPFIDE RLL E+ K+EHTLTEEE RRNSVM DMLFV +SHPLSPYIFSL D+ K+L+D
Sbjct: 679 LPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDMLFVALSHPLSPYIFSLDDRCKKLTDN 738
Query: 1249 ERAEVKEIIDPKASGGMNGYLALCNEDPCPSIFSSPVNGLEDIMNNHVIMAIYILPDAHK 1070
ER EVKE +DP+ASGGMNGY++LC DPCP IF SP+ LEDIM+N VI AIY LPDAHK
Sbjct: 739 ERTEVKEQLDPRASGGMNGYISLCGGDPCPPIFRSPIASLEDIMDNQVICAIYRLPDAHK 798
Query: 1069 HITRPPTGVIFPKKIVAVGDLRPPPALWHEDIGKKPWE--RQNRSGTNSGRQLSEDAHRL 896
HITRPP GV FPKKIV+VGDL+P P LWHED G++PWE RQN GT SGRQL E AHRL
Sbjct: 799 HITRPPVGVTFPKKIVSVGDLKPEPVLWHEDNGRRPWENGRQNLPGTISGRQLGEAAHRL 858
Query: 895 VTNSLQIKTGPSGVQQMHQSQLPYGTSLYGS--HPHPNGKHNNQEHQRSV---PPYNNRL 731
V NSLQ+K +G + PY + YG + + +++NQEH R P Y+++
Sbjct: 859 VVNSLQVKAERNGFGDQMHAPPPYPAAPYGPPLSSYSDNRYHNQEHHRMALPRPDYSDQT 918
Query: 730 ANSSFRGYEPPDGSVHQNASSSLYERSNSLYGRNNWPATQRRDPPVHG-HGTGSFQNPQL 554
S + H+ + Y R+ PVHG + G QN
Sbjct: 919 YRRSSNPASVRNHFDHRYDQPHASSATGHHYNRS----------PVHGYYQPGFHQNDGP 968
Query: 553 QYRQHVASQPMIANSHVHPRGVHPRGGYNGNH--QAYGSSSNHQRGGRQAPAANN----- 395
Y +Q I P +GG+N +H Q+YG+SS H+ P NN
Sbjct: 969 GYHPRQEAQTHIPAGAQLP----GQGGHNSHHGYQSYGASSYHEWASGWPPEGNNQSNPR 1024
Query: 394 -----RGLSRDYNHPQHQGNLYANLGRGANGRPPPP 302
+G R Y HPQ GN Y+ L R AN PPPP
Sbjct: 1025 GHGHPQGNPRGYGHPQQLGNQYSVLDRRANRGPPPP 1060
>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 1167 bits (3019), Expect = 0.0
Identities = 573/732 (78%), Positives = 626/732 (85%), Gaps = 4/732 (0%)
Frame = -1
Query: 3043 SQVCDSNVITPGTQFMAVLSIALQYYIHQRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 2864
SQVCDSNVITPGT+FM VLS+ALQYYIH RLNNDPGWKSIKVILSDANVPGEGEHKIMSY
Sbjct: 152 SQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 211
Query: 2863 IRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFT-AQQDKCFLCGQIG 2687
IRLQRNLPGFDPNTRHCLYGLDADLIML LATHEVHFSILRE+VFT QQDKCF+CGQ+G
Sbjct: 212 IRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREIVFTPGQQDKCFMCGQMG 271
Query: 2686 HLAANCEGKAKRKFGQFDEKGEGSTLEKKPYQFLNIWTLREYLGYEMRIPNAPFEIDFER 2507
HLAA+CEGKAKRK G+FDEKG+ +++ KKPYQFLNIWTLREYL YEMRIPN PFEIDFE
Sbjct: 272 HLAADCEGKAKRKAGEFDEKGQSASVVKKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEH 331
Query: 2506 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLVAVYKKEFVAMGGYLTDSSKAILSRVE 2327
IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL+AVYKKE AMGGYLTDSSK LS VE
Sbjct: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKELRAMGGYLTDSSKPNLSNVE 391
Query: 2326 HFIQAVGCYEDKIFQKRARLHQRQADRIKREKGQTRRGDDVEPQFKPESLVPVAHYRGSR 2147
HFIQAVG YEDKIFQKRARLHQRQA+RIKREK Q RRGDD +PQ KPE LVPV+ Y GSR
Sbjct: 392 HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSR 451
Query: 2146 LSSAALPSPYQPKEYVHHSGSVVEKNEVGTSKGKRSDIRNNKVPR-SSEASVGAAIVEAE 1970
L+SA PSPYQ E ++ + GTS + KV R SS A+VGAAIVEAE
Sbjct: 452 LASAPTPSPYQQHE--------IKSKQSGTSGSQ-----GRKVARFSSGATVGAAIVEAE 498
Query: 1969 NSLEMETQENKEELKTKLKDLIREKSDLFNSSIQEEDKVKLGDPGWKERYYEEKFSAKSA 1790
N LE E +NK+ELK KLK+L+REKSDLFNS EEDKVKLG+ GWKERYYEEKFS K+
Sbjct: 499 NDLETELHDNKDELKAKLKELLREKSDLFNSKNPEEDKVKLGEAGWKERYYEEKFSTKTP 558
Query: 1789 DELEAIRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDIKGLDQLEINFELG 1610
+E EA+R DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD+K L QL I+FELG
Sbjct: 559 EEQEAMRNDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELG 618
Query: 1609 SPFKPFNQLMGVFPAASCHALPEHYRELMTSSSSPIVDFYPTDFEVDMNGKRFAWQGIAK 1430
SPFKPFNQL+GVFPAAS HALPE YR+LMT +SPI+DFYPTDFEVDMNGKRFAWQGIAK
Sbjct: 619 SPFKPFNQLLGVFPAASSHALPEEYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAK 678
Query: 1429 LPFIDEGRLLNEIGKVEHTLTEEEVRRNSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDK 1250
LPFIDE RLL E+ K+EHTLTEEE RRNSVM DMLFV +SHPLSPYIFSL D+ K+L+D
Sbjct: 679 LPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDMLFVALSHPLSPYIFSLDDRCKKLTDN 738
Query: 1249 ERAEVKEIIDPKASGGMNGYLALCNEDPCPSIFSSPVNGLEDIMNNHVIMAIYILPDAHK 1070
ER EVKE +DP+ASGGMNGY++LC DPCP IF SP+ LEDIM+N VI AIY LPDAHK
Sbjct: 739 ERTEVKEQLDPRASGGMNGYISLCGGDPCPPIFRSPIASLEDIMDNQVICAIYRLPDAHK 798
Query: 1069 HITRPPTGVIFPKKIVAVGDLRPPPALWHEDIGKKPWE--RQNRSGTNSGRQLSEDAHRL 896
HITRPP GV FPKKIV+VGDL+P P LWHED G++PWE RQN GT SGRQL E AHRL
Sbjct: 799 HITRPPVGVTFPKKIVSVGDLKPEPVLWHEDNGRRPWENGRQNLPGTISGRQLGEAAHRL 858
Query: 895 VTNSLQIKTGPS 860
V NSLQ+K PS
Sbjct: 859 VVNSLQVKAEPS 870
>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 1113
Score = 1139 bits (2946), Expect = 0.0
Identities = 598/958 (62%), Positives = 693/958 (72%), Gaps = 43/958 (4%)
Frame = -1
Query: 3043 SQVCDSNVITPGTQFMAVLSIALQYYIHQRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 2864
SQV DSN+ITPGT+FMAVLSIALQYYIH RLNNDPGWK +KVILSDANVPGEGEHK+MSY
Sbjct: 152 SQVFDSNIITPGTEFMAVLSIALQYYIHLRLNNDPGWKKVKVILSDANVPGEGEHKVMSY 211
Query: 2863 IRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFT-AQQDKCFLCGQIG 2687
IRLQRNLPG+DPNTRHCLYGLDADLIML LATHE+HFSILRE+VFT QQDKCFLCGQ+G
Sbjct: 212 IRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEIHFSILREIVFTPGQQDKCFLCGQMG 271
Query: 2686 HLAANCEGKAKRKFGQFDEKGEGSTLEKKPYQFLNIWTLREYLGYEMRIPNAPFEIDFER 2507
HLAA+CEGKAKRK G+FDEKG+ + KKPYQFLNIWTLREYL EMRIPN PF+IDFE
Sbjct: 272 HLAADCEGKAKRKAGEFDEKGDEGAVAKKPYQFLNIWTLREYLELEMRIPNPPFKIDFEC 331
Query: 2506 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLVAVYKKEFVAMGGYLTDSSKAILSRVE 2327
IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL+AVYKKEF AMGGYLTD K LS+VE
Sbjct: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLLAVYKKEFTAMGGYLTDGCKPNLSKVE 391
Query: 2326 HFIQAVGCYEDKIFQKRARLHQRQADRIKREKGQTR--RGDDVEPQFKPESLVPVAHYRG 2153
HFIQAVG YEDKIFQKRARLHQRQ++RIKREK Q+R RGDD +PQ +PESLVPVA + G
Sbjct: 392 HFIQAVGSYEDKIFQKRARLHQRQSERIKREKAQSRSRRGDDAQPQVQPESLVPVARFHG 451
Query: 2152 SRLSSAALPSPYQPKEYVHHSGSVVEKNEVGTSKGKRSDIRNNKVPR-SSEASVGAAIVE 1976
SRL+SA PSP+Q + + V GK S ++ +KV R SS ASVGAAIVE
Sbjct: 452 SRLASAPSPSPFQHS--LEAADLDVRSAHFSALDGKGSSVQAHKVARLSSSASVGAAIVE 509
Query: 1975 AENSLEMETQENKEELKTKLKDLIREKSDLFNSSIQEEDKVKLGDPGWKERYYEEKFSAK 1796
AENSLE+E ENK+ELK KLK+++REKSD FNS EEDK++LGDPGWKERYYEEKFS K
Sbjct: 510 AENSLEIEVHENKDELKAKLKEILREKSDAFNSKNPEEDKIRLGDPGWKERYYEEKFSGK 569
Query: 1795 SADELEAIRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDIKGLDQLEINFE 1616
+ +ELE IR+DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD+K L QL+I FE
Sbjct: 570 TPEELEDIRRDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKHLGQLDIKFE 629
Query: 1615 LGSPFKPFNQLMGVFPAASCHALPEHYRELMTSSSSPIVDFYPTDFEVDMNGKRFAWQGI 1436
LGSPFKPFNQL+GVFPAAS HALP HYR+LM+ +SPI+DFYPTDFEVDMNGKR+AWQGI
Sbjct: 630 LGSPFKPFNQLLGVFPAASSHALPVHYRKLMSDPNSPIIDFYPTDFEVDMNGKRYAWQGI 689
Query: 1435 AKLPFIDEGRLLNEIGKVEHTLTEEEVRRNSVMSDMLFVTVSHPLSPYIFSLSDKNKQLS 1256
AKLPFIDE RLL E+ K+EHTLTEEE RRNS M DMLFV SH L+ I+ L + KQL+
Sbjct: 690 AKLPFIDEVRLLAEVKKIEHTLTEEEARRNSAMFDMLFVLSSHSLAESIYLLDNNCKQLT 749
Query: 1255 DKERAEVKEIIDPKASGGMNGYLALCNEDPCPSIFSSPVNGLEDIMNNHVIMAIYILPDA 1076
D+ER EVKE I+P+ S GMNGY++ C+ D P IF SPV G+EDI++N VI AIY LPD
Sbjct: 750 DRERVEVKERINPELSDGMNGYISPCSGDTHPPIFRSPVAGMEDILDNGVICAIYRLPDP 809
Query: 1075 HKHITRPPTGVIFPKKIVAVGDLRPPPALWHEDIGKKPWE--RQNRSGTNSGRQLSEDAH 902
HKH+TRPP GVIFPKKIV V DL+P P LWHED G+KPWE R+N GT SGRQL E +H
Sbjct: 810 HKHVTRPPAGVIFPKKIVNVVDLKPDPVLWHEDSGRKPWESDRRNPPGTISGRQLGEASH 869
Query: 901 RLVTNSLQIKTGPSG-VQQMHQSQLPYGTSLY---------GSH---------PHPNGKH 779
RLV NSLQ+K +G +H PY + + GSH P + H
Sbjct: 870 RLVVNSLQMKVDHNGYANHLHAPIPPYAATAHVPVHSSYANGSHDPRRDRTGQPRMDYSH 929
Query: 778 NNQEHQRSVPPYNNRLANSSFRGYEPPDGSVHQNASSSLYERSNSLYGRNNWPATQR--- 608
Q + YNN + + Y P G+ H + S YER N G+++ +
Sbjct: 930 AGQNRFFNPTQYNNN--HGYGQSYASP-GNAHFSGSRPQYERENRSNGQHSRQVYLQPEF 986
Query: 607 -RDPPVHGHGTGSFQNPQLQYRQHVASQPMIANSHVHPRGVHPRGGYNGNHQAYGSSSNH 431
++ P + HG+ + + Y+ SH PR ++H
Sbjct: 987 HQNGPRYLHGSMAGTSESYAYQDDYDGY----QSHQPPR-----------------DASH 1025
Query: 430 QRGGRQAPAANNRGLSRDYNHPQHQGNLYANL------------GRGANGRPP--PPH 299
Q+ G P N R Y+ Q +GN Y+ L G + RPP PPH
Sbjct: 1026 QQWGNGLPPPVNLNFPRGYDQSQQRGNRYSVLETRGSRNPQLPGASGLDRRPPPQPPH 1083
>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 1131 bits (2926), Expect = 0.0
Identities = 592/939 (63%), Positives = 681/939 (72%), Gaps = 24/939 (2%)
Frame = -1
Query: 3043 SQVCDSNVITPGTQFMAVLSIALQYYIHQRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 2864
SQ CDSNVITPGT+FMAVLSIALQYYIH RLN DPGWK +KVILSDANVPGEGEHKIMSY
Sbjct: 152 SQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSY 211
Query: 2863 IRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFT-AQQDKCFLCGQIG 2687
IR QRNLPGF+PNTRHCLYGLDADLIML LATHEVHFSILREVV+T QQDKCFLCGQ+G
Sbjct: 212 IRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVG 271
Query: 2686 HLAANCEGKAKRKFGQFDEKGEGSTLEKKPYQFLNIWTLREYLGYEMRIPNAPFEIDFER 2507
HLAANCEGK KRK G+FDEKGE + + KKPYQFLNIWTLREYL YE R+ N PF IDFER
Sbjct: 272 HLAANCEGKVKRKAGEFDEKGE-AIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFER 330
Query: 2506 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLVAVYKKEFVAMGGYLTDSSKAILSRVE 2327
IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL+AVYKKEF +MGGYLTD+ L++VE
Sbjct: 331 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVE 390
Query: 2326 HFIQAVGCYEDKIFQKRARLHQRQADRIKREKGQTRRGDDVEPQFKPESLVPVAHYRGSR 2147
HFIQAVG YEDKIFQKRARLHQRQA+RIKREK Q +RGDD++P + + +VPVA ++GSR
Sbjct: 391 HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR 450
Query: 2146 LSSAALPSPYQPKEYVHHSGSVVEKNEVGTSKGKRSDIRNNKVPRSSEASVGAAIVEAEN 1967
L+S PSPY+ +GS +KN + GK S R SS +S+ AAIVEAEN
Sbjct: 451 LASGPAPSPYE------QNGS--DKN----NGGKNSRARKAARVSSSGSSIAAAIVEAEN 498
Query: 1966 SLEMETQENKEELKTKLKDLIREKSDLFNSSIQEEDKVKLGDPGWKERYYEEKFSAKSAD 1787
LE + +ENKE+LKT LKD +REKSD+FNS EEDK+KLG+PGW+ERYYEEKF A++
Sbjct: 499 DLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPG 558
Query: 1786 ELEAIRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDIKGLDQLEINFELGS 1607
++E IR+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD+ GL QL I FELGS
Sbjct: 559 QIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS 618
Query: 1606 PFKPFNQLMGVFPAASCHALPEHYRELMTSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKL 1427
PFKPF+QLMGVFPAAS HALP YR+LMT ++SPI+DFYPTDFEVDMNGKR++WQGIAKL
Sbjct: 619 PFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKL 678
Query: 1426 PFIDEGRLLNEIGKVEHTLTEEEVRRNSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKE 1247
PFIDE RLL EI KVEHTLT EE RRNS+M +MLFV SHPLSPYI+SL+ K L D+E
Sbjct: 679 PFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRE 738
Query: 1246 RAEVKEIIDPKASGGMNGYLALCNEDPCPSIFSSPVNGLEDIMNNHVIMAIYILPDAHKH 1067
R E+KE IDP +SGGMNGY++LC+ DPCP +F SPV+GLEDIM+N VI IY LPD+HKH
Sbjct: 739 RNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKH 798
Query: 1066 ITRPPTGVIFPKKIVAVGDLRPPPALWHEDIGKKPWE-----------RQNRSGTNSGRQ 920
I RPP GVI PKK V DL+PPP LWHED G++P + RQN +G SGRQ
Sbjct: 799 IARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYENSNRQNPAGAISGRQ 858
Query: 919 LSEDAHRLVTNSLQIKTGPSGVQQMHQSQLPYGTSLYGSHPHPNGKHNNQEHQRSVPPYN 740
L E AHRLV NSL ++G Q + +PY T + G P+PNG E
Sbjct: 859 LGEAAHRLVVNSLNARSG----GQYNTPSMPYQTIMNGM-PYPNGIPPRMEQPAPGWHVP 913
Query: 739 NRLANSSF-RGYEPPDGSVHQNASS-SLYERSNS---LYGRNNWPATQRRDPPVHGHGTG 575
L N Y G ++ S S Y R N Y R+N ++ R PP H G
Sbjct: 914 GDLPNGQVPPAYASSSGHYQKDRSGPSQYGRDNHGRYPYARDNHHDSRGRVPPYHQSGGN 973
Query: 574 SFQN---PQLQYRQHVASQPMIANSHVHPRGVHPRGG----YNGNHQAYGSSSNHQRGGR 416
S+Q+ P Q+ A P A + P GG Q YGS + G
Sbjct: 974 SYQSHSAPSAGPGQY-AQPPPYAGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGG 1032
Query: 415 QAPAANNRGLSRDYNHPQHQGNLYANLGRGANGRPPPPH 299
AP A R + PQ N Y L R +N RPPP H
Sbjct: 1033 GAPPA------RPNSRPQQSQNRYNTLDRNSNRRPPPGH 1065
>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3'
exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 1131 bits (2926), Expect = 0.0
Identities = 590/938 (62%), Positives = 678/938 (72%), Gaps = 23/938 (2%)
Frame = -1
Query: 3043 SQVCDSNVITPGTQFMAVLSIALQYYIHQRLNNDPGWKSIKVILSDANVPGEGEHKIMSY 2864
SQ CDSNVITPGT+FMAVLSIALQYYIH RLN DPGWK +KVILSDANVPGEGEHKIMSY
Sbjct: 152 SQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSY 211
Query: 2863 IRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFT-AQQDKCFLCGQIG 2687
IR QRNLPGF+PNTRHCLYGLDADLIML LATHEVHFSILREVV+T QQDKCFLCGQ+G
Sbjct: 212 IRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVG 271
Query: 2686 HLAANCEGKAKRKFGQFDEKGEGSTLEKKPYQFLNIWTLREYLGYEMRIPNAPFEIDFER 2507
HLAANCEGK KRK G+FDEKGE + + KKPYQFLNIWTLREYL YE R+ N PF IDFER
Sbjct: 272 HLAANCEGKVKRKAGEFDEKGE-AIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFER 330
Query: 2506 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLVAVYKKEFVAMGGYLTDSSKAILSRVE 2327
IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL+AVYKKEF +MGGYLTD+ L++VE
Sbjct: 331 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVE 390
Query: 2326 HFIQAVGCYEDKIFQKRARLHQRQADRIKREKGQTRRGDDVEPQFKPESLVPVAHYRGSR 2147
HFIQAVG YEDKIFQKRARLHQRQA+RIKREK Q +RGDD++P + + +VPVA ++GSR
Sbjct: 391 HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR 450
Query: 2146 LSSAALPSPYQPKEYVHHSGSVVEKNEVGTSKGKRSDIRNNKVPRSSEASVGAAIVEAEN 1967
L+S +PSPY+ +GS +KN + GK S R SS +S+ AAIVEAEN
Sbjct: 451 LASGPVPSPYE------QNGS--DKN----NGGKNSRARKAARVSSSGSSIAAAIVEAEN 498
Query: 1966 SLEMETQENKEELKTKLKDLIREKSDLFNSSIQEEDKVKLGDPGWKERYYEEKFSAKSAD 1787
LE + +ENKE+LKT LKD +REKSD+FNS EEDK+KLG+PGW+ERYYEEKF A++
Sbjct: 499 DLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPG 558
Query: 1786 ELEAIRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDIKGLDQLEINFELGS 1607
++E IR+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD+ GL QL I FELGS
Sbjct: 559 QIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS 618
Query: 1606 PFKPFNQLMGVFPAASCHALPEHYRELMTSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKL 1427
PFKPF+QLMGVFPAAS HALP YR+LMT ++SPI+DFYPTDFEVDMNGKR++WQGIAKL
Sbjct: 619 PFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKL 678
Query: 1426 PFIDEGRLLNEIGKVEHTLTEEEVRRNSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKE 1247
PFIDE RLL EI KVEHTLT EE RRNS+M +MLFV SHPLSPYI+SL+ K L D+E
Sbjct: 679 PFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRE 738
Query: 1246 RAEVKEIIDPKASGGMNGYLALCNEDPCPSIFSSPVNGLEDIMNNHVIMAIYILPDAHKH 1067
R E+KE IDP +SGGMNGY++LC+ DPCP +F SPV+GLEDIM+N VI IY LPD+HKH
Sbjct: 739 RNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKH 798
Query: 1066 ITRPPTGVIFPKKIVAVGDLRPPPALWHEDIGKKPWE-----------RQNRSGTNSGRQ 920
I RPP GVI PKK V DL+PPP LWHED G++P + RQN +G SGRQ
Sbjct: 799 IARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYENSNRQNPAGAISGRQ 858
Query: 919 LSEDAHRLVTNSLQIKTGPSGVQQMHQSQLPYGTSLYGSHPHPNGKHNNQEHQRSVPPYN 740
L E AHRLV NSL ++G Q + +PY T + G P+PNG E
Sbjct: 859 LGEAAHRLVVNSLNARSG----GQYNTPSMPYQTIMNGM-PYPNGIPPRMEQPAPGWHVP 913
Query: 739 NRLANSSFRGYEPPDGSVHQNASS--SLYERSNS---LYGRNNWPATQRRDPPVHGHGTG 575
L N +QN S S Y R N Y R+N ++ R PP H G
Sbjct: 914 GDLPNGQVPPAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDNHHDSRGRVPPYHQSGGN 973
Query: 574 SFQNPQLQYR--QHVASQPMIANSHVHPRGVHPRGG----YNGNHQAYGSSSNHQRGGRQ 413
S+Q+ A P A + P GG Q YGS + G
Sbjct: 974 SYQSHSAPSAGPGRYAQPPPYAGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGG 1033
Query: 412 APAANNRGLSRDYNHPQHQGNLYANLGRGANGRPPPPH 299
AP A R + PQ N Y L R +N RPPP H
Sbjct: 1034 APPA------RPNSRPQQSQNRYNTLDRNSNRRPPPGH 1065