BLASTX nr result

ID: Coptis23_contig00002729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002729
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520881.1| conserved hypothetical protein [Ricinus comm...   221   1e-55
ref|XP_002325928.1| predicted protein [Populus trichocarpa] gi|2...   220   3e-55
ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 6...   216   4e-54
ref|XP_004146472.1| PREDICTED: U-box domain-containing protein 6...   216   4e-54
ref|XP_004147826.1| PREDICTED: U-box domain-containing protein 6...   216   5e-54

>ref|XP_002520881.1| conserved hypothetical protein [Ricinus communis]
           gi|223540012|gb|EEF41590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score =  221 bits (564), Expect = 1e-55
 Identities = 113/158 (71%), Positives = 125/158 (79%), Gaps = 2/158 (1%)
 Frame = -1

Query: 807 SFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERF 628
           SFG GG+QH+ + K CYTC QS TEDSVAPNLSLR+A+ AFRREEEL   R+SK++RERF
Sbjct: 237 SFGVGGIQHIIRTKACYTCSQSTTEDSVAPNLSLRAAVQAFRREEELQFYRSSKRKRERF 296

Query: 627 EQDKSSCGD-LSMYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYV 451
           +QDK   GD  +M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYV
Sbjct: 297 DQDKGGFGDSTAMDAPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYV 356

Query: 450 VKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 340
           VKTLDNAESVKLQYRSLAKV              PNWL
Sbjct: 357 VKTLDNAESVKLQYRSLAKVSDAPSGKALSSKIPPNWL 394


>ref|XP_002325928.1| predicted protein [Populus trichocarpa] gi|222862803|gb|EEF00310.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  220 bits (561), Expect = 3e-55
 Identities = 112/158 (70%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
 Frame = -1

Query: 807 SFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERF 628
           SFG+GG+QHV +MKVCY+C QS++EDS+APNLSLR A+ AF+REEEL   R+SK+RRERF
Sbjct: 69  SFGAGGMQHVIRMKVCYSCSQSISEDSIAPNLSLRYAVQAFQREEELQFYRSSKRRRERF 128

Query: 627 EQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYV 451
           +QDK   GD   M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYV
Sbjct: 129 DQDKGGYGDSGVMDPPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYV 188

Query: 450 VKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 340
           VKTLDNAESVKLQYRSLAK+              PNWL
Sbjct: 189 VKTLDNAESVKLQYRSLAKLSDDPSSKTISTKIAPNWL 226


>ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 380

 Score =  216 bits (551), Expect = 4e-54
 Identities = 111/158 (70%), Positives = 126/158 (79%), Gaps = 2/158 (1%)
 Frame = -1

Query: 807 SFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERF 628
           SFGSGG+QHV ++K CY+C QSV+EDS+A NLSL++A+ AFRREEEL    + K+RRERF
Sbjct: 223 SFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLFYHSPKRRRERF 282

Query: 627 EQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYV 451
           EQ+K   GDL+ M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYV
Sbjct: 283 EQEKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYV 342

Query: 450 VKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 340
           VKTLDNAESVKLQYRSLAKV              PNWL
Sbjct: 343 VKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL 380


>ref|XP_004146472.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 379

 Score =  216 bits (551), Expect = 4e-54
 Identities = 111/158 (70%), Positives = 126/158 (79%), Gaps = 2/158 (1%)
 Frame = -1

Query: 807 SFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERF 628
           SFGSGG+QHV ++K CY+C QSV+EDS+A NLSL++A+ AFRREEEL    + K+RRERF
Sbjct: 222 SFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLFYHSPKRRRERF 281

Query: 627 EQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYV 451
           EQ+K   GDL+ M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYV
Sbjct: 282 EQEKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYV 341

Query: 450 VKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 340
           VKTLDNAESVKLQYRSLAKV              PNWL
Sbjct: 342 VKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL 379


>ref|XP_004147826.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus] gi|449476988|ref|XP_004154895.1| PREDICTED:
           U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 429

 Score =  216 bits (550), Expect = 5e-54
 Identities = 113/158 (71%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
 Frame = -1

Query: 807 SFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERF 628
           SFGSGG+QHV K++ CY+C QSV+EDS+A NLSL++A+ AF REEEL   R+ K+RRERF
Sbjct: 272 SFGSGGIQHVLKVRSCYSCSQSVSEDSIAQNLSLQAAVQAFCREEELLFHRSPKRRRERF 331

Query: 627 EQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYV 451
           EQDK   GDL+ M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYV
Sbjct: 332 EQDKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYV 391

Query: 450 VKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 340
           VKTLDNAESVKLQYRSLAKV             TPNWL
Sbjct: 392 VKTLDNAESVKLQYRSLAKVPNDATTKTITRKITPNWL 429


Top