BLASTX nr result

ID: Coptis23_contig00002728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002728
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240966.1| uncharacterized protein LOC100785545 [Glycin...    99   1e-18
ref|XP_002299907.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_002313340.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|NP_001240164.1| uncharacterized protein LOC100806243 [Glycin...    92   8e-17
ref|XP_003600473.1| hypothetical protein MTR_3g061570 [Medicago ...    89   9e-16

>ref|NP_001240966.1| uncharacterized protein LOC100785545 [Glycine max]
           gi|255635239|gb|ACU17974.1| unknown [Glycine max]
          Length = 185

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 48/90 (53%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = +3

Query: 45  YCSTPT-SSEKLSKVDEKD-IHHSSKGLEVSSSVCSTPKAQRHRIPTRVLCPPAPKKPRI 218
           YCS+ + SS+  S   E D +H S++ ++V +S CSTPK ++ RIP    CPPAPKKPR+
Sbjct: 94  YCSSSSISSQDSSNSKEVDNMHGSAEVIDVCNSPCSTPKGKKFRIPEISTCPPAPKKPRV 153

Query: 219 LSHCSSQRKPISFFAPPDIEHFFCFALQTI 308
           LS+CS +R P+SFFAPPD+EHFF  AL+ +
Sbjct: 154 LSNCSLRRSPLSFFAPPDLEHFFFVALRDV 183


>ref|XP_002299907.1| predicted protein [Populus trichocarpa] gi|222847165|gb|EEE84712.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 45/86 (52%), Positives = 62/86 (72%)
 Frame = +3

Query: 51  STPTSSEKLSKVDEKDIHHSSKGLEVSSSVCSTPKAQRHRIPTRVLCPPAPKKPRILSHC 230
           +T TS    SK+D  D     +G+++S+S CSTPKA+R RIP    CPPAP+K RI+S+C
Sbjct: 44  TTTTSCNGCSKIDGLDF----EGVDISASACSTPKAERFRIPEIQTCPPAPRKERIISNC 99

Query: 231 SSQRKPISFFAPPDIEHFFCFALQTI 308
           S QR+PI+FFAPPD+E FF +A+  +
Sbjct: 100 SLQRRPIAFFAPPDLELFFFYAIHDV 125


>ref|XP_002313340.1| predicted protein [Populus trichocarpa] gi|222849748|gb|EEE87295.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/89 (51%), Positives = 66/89 (74%)
 Frame = +3

Query: 36  EFPYCSTPTSSEKLSKVDEKDIHHSSKGLEVSSSVCSTPKAQRHRIPTRVLCPPAPKKPR 215
           +FP  S+ TS +  S++D  D+    +G+++S+S CSTPKA+R RIP    CPPAP+K R
Sbjct: 42  DFPSNSS-TSCDDCSRIDGLDV----EGVDISTSACSTPKAERFRIPEIQTCPPAPRKQR 96

Query: 216 ILSHCSSQRKPISFFAPPDIEHFFCFALQ 302
           ++S CS QR+PI+FFAPPD+E FF +AL+
Sbjct: 97  MISICSLQRRPIAFFAPPDLELFFFYALR 125


>ref|NP_001240164.1| uncharacterized protein LOC100806243 [Glycine max]
           gi|255641372|gb|ACU20963.1| unknown [Glycine max]
          Length = 162

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
 Frame = +3

Query: 24  VKPVEFPYCSTPTSSEKLSKVDEKDIHHSSKGLEV-----SSSVCSTPKAQRHRIPTRVL 188
           V P      S  +     SK  + ++H S++ ++V     ++S CSTPK Q+ RIP    
Sbjct: 61  VLPSSCSSSSISSQDSSNSKEVDNNMHGSAEVIDVVCNSNTNSPCSTPKGQKFRIPEIST 120

Query: 189 CPPAPKKPRILSHCSSQRKPISFFAPPDIEHFFCFALQTI 308
           CPPAPKKPR+LS+CS +R P+SFFAPPD+EHFF  AL+ +
Sbjct: 121 CPPAPKKPRVLSNCSLRRSPLSFFAPPDLEHFFFVALRDV 160


>ref|XP_003600473.1| hypothetical protein MTR_3g061570 [Medicago truncatula]
           gi|355489521|gb|AES70724.1| hypothetical protein
           MTR_3g061570 [Medicago truncatula]
           gi|388491896|gb|AFK34014.1| unknown [Medicago
           truncatula]
          Length = 142

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  KNEVKPVEFPYCSTPTSSEKLSKVDEKDIHHSSKGLEVSSS----VCSTPKAQRHRIPTR 182
           K E+     P    P +S++ SK ++ +I   S+ ++VS+S     CSTPK Q++RIP  
Sbjct: 47  KQEIINKVLPSSCLPKTSQESSKEEKTEI---SEVIDVSNSNNNSACSTPKGQKYRIPEI 103

Query: 183 VLCPPAPKKPRILSHCSSQRKPISFFAPPDIEHFFCFAL 299
             CPPAPKK R++S+CS +R P+SFF PPD+EHFF   L
Sbjct: 104 STCPPAPKKQRVVSNCSLRRSPLSFFVPPDLEHFFLVTL 142


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