BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002723
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34603.3| unnamed protein product [Vitis vinifera]              417   e-114
ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...   416   e-114
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   416   e-113
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   412   e-112
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   409   e-112

>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  417 bits (1071), Expect = e-114
 Identities = 213/290 (73%), Positives = 237/290 (81%), Gaps = 2/290 (0%)
 Frame = -3

Query: 1249 GNYDEKENGTRDEMKDLEELLSKLNPMAEEFIPTSLVM--INGNNNNHGSFLMNGNFYGN 1076
            G + ++   +  +M++L+EL SKLNPMAEEF+P SL    +NG   ++GS   N    G 
Sbjct: 122  GGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLANNGLNGGFYSNGSETHNNTRNGQ 181

Query: 1075 INYGMQNKMGNGNANGYTXXXXXXXXXXXRMNTRTSQAQREDVIRRTVYVSDIDQQVTEE 896
            +N   +N  G G                  MN+RTS AQRE++IRRTVYVSDIDQQVTEE
Sbjct: 182  VNGRRKNNFGQGKRR---------------MNSRTSMAQREEIIRRTVYVSDIDQQVTEE 226

Query: 895  QLAALFINCGHVVDCRICGDPNSVLRFAFIEFTDEDGARNALSLAGTMLGYYPVRVLPSK 716
            +LAALFI CG VVDCR+CGDPNSVLRFAF+EFTDE+GAR ALSLAGTMLGYYPVRVLPSK
Sbjct: 227  KLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSK 286

Query: 715  TAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 536
            TAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLGDYH
Sbjct: 287  TAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYH 346

Query: 535  HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRAPI 386
            HSTRIAFVEF+MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR PI
Sbjct: 347  HSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPI 396


>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
            gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
            [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
            CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score =  416 bits (1069), Expect = e-114
 Identities = 213/285 (74%), Positives = 234/285 (82%)
 Frame = -3

Query: 1240 DEKENGTRDEMKDLEELLSKLNPMAEEFIPTSLVMINGNNNNHGSFLMNGNFYGNINYGM 1061
            D  E+  RD M++L+EL SKLNPMAEEF+P SL    GN  N G F   G+F+ N  +  
Sbjct: 74   DGGESFKRD-MRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAG 132

Query: 1060 QNKMGNGNANGYTXXXXXXXXXXXRMNTRTSQAQREDVIRRTVYVSDIDQQVTEEQLAAL 881
                G GN NG             RMN RTS AQREDVIRRTVYVSD+DQQVTEEQLA L
Sbjct: 133  TGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGL 192

Query: 880  FINCGHVVDCRICGDPNSVLRFAFIEFTDEDGARNALSLAGTMLGYYPVRVLPSKTAIAP 701
            F++CG VVDCRICGDPNSVLRFAFIEFTDE+GA  AL+L+GTMLG+YPV+VLPSKTAIAP
Sbjct: 193  FVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAP 252

Query: 700  VNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 521
            VNPTFLPR+EDEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRI
Sbjct: 253  VNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRI 312

Query: 520  AFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRAPI 386
            AFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR P+
Sbjct: 313  AFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPM 357


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  416 bits (1068), Expect = e-113
 Identities = 216/288 (75%), Positives = 237/288 (82%)
 Frame = -3

Query: 1249 GNYDEKENGTRDEMKDLEELLSKLNPMAEEFIPTSLVMINGNNNNHGSFLMNGNFYGNIN 1070
            G + ++   +  +M++L+EL SKLNPMAEEF+P SL        N+G   +NG FY N  
Sbjct: 122  GGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLA-------NNG---LNGGFYSN-G 170

Query: 1069 YGMQNKMGNGNANGYTXXXXXXXXXXXRMNTRTSQAQREDVIRRTVYVSDIDQQVTEEQL 890
                N   NG  NG             RMN+RTS AQRE++IRRTVYVSDIDQQVTEE+L
Sbjct: 171  SETHNNTRNGQVNG-RRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKL 229

Query: 889  AALFINCGHVVDCRICGDPNSVLRFAFIEFTDEDGARNALSLAGTMLGYYPVRVLPSKTA 710
            AALFI CG VVDCR+CGDPNSVLRFAF+EFTDE+GAR ALSLAGTMLGYYPVRVLPSKTA
Sbjct: 230  AALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTA 289

Query: 709  IAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 530
            IAPVNPTFLPR+EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLGDYHHS
Sbjct: 290  IAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHS 349

Query: 529  TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRAPI 386
            TRIAFVEF+MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR PI
Sbjct: 350  TRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPI 397


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
            gi|302143972|emb|CBI23077.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  412 bits (1060), Expect = e-112
 Identities = 224/328 (68%), Positives = 254/328 (77%), Gaps = 2/328 (0%)
 Frame = -3

Query: 1372 ENTVTETVPKHESNLEKNDLDENSVVVDHNKVQMNGTKYGFGNYDEKENGTRDEMKDLEE 1193
            EN  ++ +P+ +     N +          K+QM G+   FG   ++E+G   +++DLE+
Sbjct: 56   ENYYSQKIPQFQQKAGSNGVA---------KIQMVGS---FGR--DREDG--GDIRDLED 99

Query: 1192 LLSKLNPMAEEFIPTSLVMINGNNNNHGS-FLMNGNFYGNINYGMQN-KMGNGNANGYTX 1019
            LLSKLNPMAEEF+P SL   NG+  + G+ F    NF    N+G  N   G    N Y  
Sbjct: 100  LLSKLNPMAEEFVPPSLA--NGHGWSAGAAFGYTNNFVLQANFGNANGNAGRRKRNNYNQ 157

Query: 1018 XXXXXXXXXXRMNTRTSQAQREDVIRRTVYVSDIDQQVTEEQLAALFINCGHVVDCRICG 839
                       +N+RTS AQRE+VI+RTVYVSDIDQQVTEE LAALFINCG VVDCRICG
Sbjct: 158  KRR--------INSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICG 209

Query: 838  DPNSVLRFAFIEFTDEDGARNALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDERE 659
            DPNSVLRFAF+EFTDE+GAR ALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDERE
Sbjct: 210  DPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDERE 269

Query: 658  MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAA 479
            MCARTIYCTNIDKKVTQA+VKLFFES+CGEV+RLRLLGDYHHSTRIAFVEFVMAESAIAA
Sbjct: 270  MCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAA 329

Query: 478  LNCSGVVLGSLPIRVSPSKTPVRPRAPR 395
            LNCSG +LGSLPIRVSPSKTPVRPRAPR
Sbjct: 330  LNCSGAILGSLPIRVSPSKTPVRPRAPR 357


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
            gi|223541913|gb|EEF43459.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 379

 Score =  409 bits (1052), Expect = e-112
 Identities = 216/297 (72%), Positives = 241/297 (81%), Gaps = 10/297 (3%)
 Frame = -3

Query: 1246 NYDEKENGTRD---EMKDLEELLSKLNPMAEEFIPTSLVMINGNNNN-HGSFLMNGNFYG 1079
            ++ ++ +G  D   ++++L+EL SKLNPMAEEF+P SL     +NN  HG   +N  FY 
Sbjct: 82   HHHQRSSGGGDLQRDIRELQELFSKLNPMAEEFVPPSLANNKISNNYIHGLNGLNVGFYT 141

Query: 1078 NIN-----YGMQNKMGNGNANGYTXXXXXXXXXXXR-MNTRTSQAQREDVIRRTVYVSDI 917
            N N     + + N   NG  NG             R +N+RTS AQRE++IRRTVYVSDI
Sbjct: 142  NNNNYDPAFMLTNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEIIRRTVYVSDI 201

Query: 916  DQQVTEEQLAALFINCGHVVDCRICGDPNSVLRFAFIEFTDEDGARNALSLAGTMLGYYP 737
            DQQVTEEQLAALF+ CG VVDCRICGDPNSVLRFAFIEFT E+GAR AL+LAGT+LGYYP
Sbjct: 202  DQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGYYP 261

Query: 736  VRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRL 557
            VRVLPSKTAIAPVNPTFLPRS+DEREMC RTIYCTNIDKKVTQADVKLFFESVCGEVYRL
Sbjct: 262  VRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRL 321

Query: 556  RLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRAPI 386
            RLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR P+
Sbjct: 322  RLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIPM 378