BLASTX nr result

ID: Coptis23_contig00002717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002717
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002333867.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|ABK94156.1| unknown [Populus trichocarpa]                           90   2e-16
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...    89   5e-16
ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|1...    89   5e-16

>ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|222872866|gb|EEF09997.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 RTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQ 3
           RTEKDITPIGGFPHYGVVKEDYL+IKGCCVGPKKRVVTLRQ
Sbjct: 304 RTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQ 344


>ref|XP_002333867.1| predicted protein [Populus trichocarpa] gi|222838758|gb|EEE77109.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 RTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQ 3
           RTEKDITPIGGFPHYGVVKEDYL+IKGCCVGPKKRVVTLRQ
Sbjct: 67  RTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQ 107


>gb|ABK94156.1| unknown [Populus trichocarpa]
          Length = 389

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 RTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQ 3
           RTEKDITPIGGFPHYGVVKEDYL+IKGCCVGPKKRVVTLRQ
Sbjct: 304 RTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQ 344


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
           gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 389

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/41 (95%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 RTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQ 3
           RTEKDITPIGGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQ
Sbjct: 304 RTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQ 344


>ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|118483469|gb|ABK93633.1|
           unknown [Populus trichocarpa]
           gi|222843894|gb|EEE81441.1| predicted protein [Populus
           trichocarpa]
          Length = 389

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/41 (95%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 RTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQ 3
           RTEKDITPIGGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQ
Sbjct: 304 RTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQ 344


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