BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002712
         (2819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1219   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1189   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1180   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1179   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1177   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1219 bits (3154), Expect = 0.0
 Identities = 609/838 (72%), Positives = 695/838 (82%), Gaps = 3/838 (0%)
 Frame = -1

Query: 2819 KLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHEWLFKARRLLQDELSKKGQKF 2640
            KLF+ ID  +  DN D LQN EVL PGHLITIYLK+KL EWL+KARRLLQDE++K+ + F
Sbjct: 313  KLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKR-KNF 371

Query: 2639 EFGSLVDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLDLQQKGGMTVQAERLNFLRFI 2460
            EF SL  VKKV+D+NPS+ I  A+E+MLKTGRL +Q+GLDLQQ+ GMTVQAERLNFLRF+
Sbjct: 372  EFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFL 431

Query: 2459 SHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 2280
            SHFR+VHRGA+FAG R TSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS
Sbjct: 432  SHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 491

Query: 2279 KGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLSVLLDGCVIGSISSNMVEKAV 2100
            +GN +DFFKIR+SILSVLIG+GMTP+LPKLV+AGPPEVLSV+LDG V+GSI S+ VE AV
Sbjct: 492  RGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAV 551

Query: 2099 AHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSPSRFVRPV--ISLNAEKNHDI 1926
             H+R+LK+SA S IPDDLEVGY+PLS+GGAYPGLYLF+SPSRFVRPV  IS+ +E+ HDI
Sbjct: 552  NHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDI 611

Query: 1925 ELIGPFEQVYMEIRCADGGEGGRTDDNPATHEEMHPTGLLSVVANLTPYSDHNQSPRNMY 1746
            ELIGPFEQVYMEIRC DG +GGR +  PATHEE+HPTG+LSVVA+LTP+SDHNQSPRNMY
Sbjct: 612  ELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMY 671

Query: 1745 QCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAYTKYNIDEFPTGTNAIVAVLA 1566
            QCQM KQT+ FSSQA+  RADQKLYHLQTPQTPIVRT AY KY++DEFPTGTNAIVAVLA
Sbjct: 672  QCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLA 731

Query: 1565 YTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGKSDHARQIFARSNIDKSVRSS 1386
            Y+GYDMEDAMILNKSSV+RG+CH  IYQ ETIDL +++ KSD  +++F RSN+DKS  S 
Sbjct: 732  YSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSL 791

Query: 1385 VDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKQHKLKGSEPVTVDYVAVDVKHNP-PQKVX 1209
            +DSDGLPYVGQ+++P +PYCS  N ++ + +  KLKGSEPV VDYVA+D K+   PQKV 
Sbjct: 792  IDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVN 851

Query: 1208 XXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIG 1029
                      IGDKFSSRHGQKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSRMTI 
Sbjct: 852  IRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIA 911

Query: 1028 MLLESIAAKGGCLNGKFVDATPFPSSSRKENKELXXXXXXXXXXXXXXXXXXXXXXXLTS 849
            MLLES+AAKGG L+GKFVDATPF  S RK N E                        LTS
Sbjct: 912  MLLESVAAKGGSLHGKFVDATPFSDSLRKANGE---------AGSESSSLVDELGSMLTS 962

Query: 848  HGFNSLGSEVLYSGVLGTELICEIFIGPVYYQRLRHMVSDKFQVRNTGAVDPTTRQPMXX 669
            +GFN  G EVLYSG  GTEL CEIFIGPVYYQRLRHMVSDKFQVR+TG VD  TRQP+  
Sbjct: 963  YGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKG 1022

Query: 668  XXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVADVCSLCGSILTTSFIEPQKKA 489
                 GIRFGEMERDS+LAHGAAYLLHDRLHT SD H+ADVCSLCGSILTTS I+PQK+A
Sbjct: 1023 RKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRA 1082

Query: 488  GQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLAAELAAMNVKMTLNLSAGA 315
             + I  + P    +KVTCHAC+TSKGME V+MP++FR+LAAELAAMN+KMTL LS GA
Sbjct: 1083 VREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGA 1140


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1189 bits (3075), Expect = 0.0
 Identities = 600/838 (71%), Positives = 682/838 (81%), Gaps = 3/838 (0%)
 Frame = -1

Query: 2819 KLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHEWLFKARRLLQDELSKKGQKF 2640
            KLF+ ID  +  DN D LQN EVL PGHLITIYLK+KL EWL+KARRLLQDE++K+ + F
Sbjct: 306  KLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKR-KNF 364

Query: 2639 EFGSLVDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLDLQQKGGMTVQAERLNFLRFI 2460
            EF SL  VKKV+D+NPS+ I  A+E+MLKTGRL +Q+GLDLQQ+ GMTVQAERLNFLRF+
Sbjct: 365  EFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFL 424

Query: 2459 SHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 2280
            SHFR+VHRGA+FAG R TSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS
Sbjct: 425  SHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 484

Query: 2279 KGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLSVLLDGCVIGSISSNMVEKAV 2100
            +GN +DFFKIR+SILSVLIG+GMTP+LPKLV+AGPPEVLSV+LDG V+GSI S+ VE AV
Sbjct: 485  RGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAV 544

Query: 2099 AHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSPSRFVRPV--ISLNAEKNHDI 1926
             H+R+LK+SA S IPDDLEVGY+PLS+GGAYPGLYLF+SPSRFVRPV  IS+ +E+ HDI
Sbjct: 545  NHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDI 604

Query: 1925 ELIGPFEQVYMEIRCADGGEGGRTDDNPATHEEMHPTGLLSVVANLTPYSDHNQSPRNMY 1746
            ELIGPFEQVYMEIRC DG +GGR +  PATHEE+HPTG+LSVVA+LTP+SDHNQSPRNMY
Sbjct: 605  ELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMY 664

Query: 1745 QCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAYTKYNIDEFPTGTNAIVAVLA 1566
            QCQM KQT+ FSSQA+  RADQKLYHLQTPQTPIVRT AY KY++DEFPTGTNAIVAVLA
Sbjct: 665  QCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLA 724

Query: 1565 YTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGKSDHARQIFARSNIDKSVRSS 1386
            Y+GYDMEDAMILNKSSV+RG+CH  IYQ ETIDL +++ KSD  +++F RSN+DKS  S 
Sbjct: 725  YSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSL 784

Query: 1385 VDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKQHKLKGSEPVTVDYVAVDVKHNP-PQKVX 1209
            +DSDGLPYVGQ+++P +PYCS  N ++ + +  KLKGSEPV VDYVA+D K+   PQKV 
Sbjct: 785  IDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVN 844

Query: 1208 XXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIG 1029
                      IGDKFSSRHGQKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSRMTI 
Sbjct: 845  IRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIA 904

Query: 1028 MLLESIAAKGGCLNGKFVDATPFPSSSRKENKELXXXXXXXXXXXXXXXXXXXXXXXLTS 849
            MLLES+AAKGG L+GKFVDATPF  S RK N E                        LTS
Sbjct: 905  MLLESVAAKGGSLHGKFVDATPFSDSLRKANGE---------AGSESSSLVDELGSMLTS 955

Query: 848  HGFNSLGSEVLYSGVLGTELICEIFIGPVYYQRLRHMVSDKFQVRNTGAVDPTTRQPMXX 669
            +GFN  G EVLYSG  GTEL CEIFIGPVYYQRLRHMVSDKFQVR+TG VD  TRQP+  
Sbjct: 956  YGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKG 1015

Query: 668  XXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVADVCSLCGSILTTSFIEPQKKA 489
                 GIRFGEMERDS+LAHGAAYLLHDRLHT SD H+ADVCSLCGSILTTS I+PQK+A
Sbjct: 1016 RKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRA 1075

Query: 488  GQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLAAELAAMNVKMTLNLSAGA 315
                                  TSKGME V+MP++FR+LAAELAAMN+KMTL LS GA
Sbjct: 1076 ----------------------TSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGA 1111


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1180 bits (3052), Expect = 0.0
 Identities = 583/839 (69%), Positives = 683/839 (81%), Gaps = 3/839 (0%)
 Frame = -1

Query: 2819 KLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHEWLFKARRLLQDELSKKGQKF 2640
            KLF+ ID  +  DN D+LQN +VL PG LIT+YLK+KL +WL K ++LL+DE+S   + F
Sbjct: 343  KLFSLIDQTSVPDNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNF 402

Query: 2639 EFGSLVDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLDLQQKGGMTVQAERLNFLRFI 2460
            EF SL  VKKV+D+NPSK + +A+E+MLKTGRL +Q GLDLQQ+ G TVQAERLNFLRF+
Sbjct: 403  EFCSLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFV 462

Query: 2459 SHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 2280
            SHFR+VHRGA+FAG R T+VRKLLPE+WGFLCPVHTPDGEPCGLLNH+ STCRITS+F+S
Sbjct: 463  SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNS 522

Query: 2279 KGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLSVLLDGCVIGSISSNMVEKAV 2100
            +G ++DF+KIR SILSVLI VGM PSLPKLV+ G P+ L+VLLDG ++G ISSN VEK V
Sbjct: 523  QGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIV 582

Query: 2099 AHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSPSRFVRPV--ISLNAEKNHDI 1926
            AH+R+LK+ +   IPDDLEVGYVPLS+ GAYPGLYLF+SPSRFVRPV  +S++ E NH+I
Sbjct: 583  AHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNI 642

Query: 1925 ELIGPFEQVYMEIRCADGGEGGRTDDNPATHEEMHPTGLLSVVANLTPYSDHNQSPRNMY 1746
            ELIGPFEQV+MEIRC DGG+GGR D+ PATHEE+HPTG+LSVVANLTP+SDHNQSPRNMY
Sbjct: 643  ELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMY 702

Query: 1745 QCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAYTKYNIDEFPTGTNAIVAVLA 1566
            QCQMAKQT+ FS QA+++RADQKLYHLQTPQTPIVRT  YTKYNIDE+PTGTNAIVAVLA
Sbjct: 703  QCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 762

Query: 1565 YTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGKSDHARQIFARSNIDKSVRSS 1386
            YTGYDMEDAMILNKSSVERGM H  IYQ ETIDL +Q  +S  ++++F RSNID SVRS 
Sbjct: 763  YTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSI 822

Query: 1385 VDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKQHKLKGSEPVTVDYVAVDVKH-NPPQKVX 1209
            +D+DGLPYVGQ++ P +PYCS  + ++G  +  KLKGSE V VDYV+VDVK+ N PQKV 
Sbjct: 823  IDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVN 882

Query: 1208 XXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIG 1029
                      IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTI 
Sbjct: 883  IRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIA 942

Query: 1028 MLLESIAAKGGCLNGKFVDATPFPSSSRKENKELXXXXXXXXXXXXXXXXXXXXXXXLTS 849
            ML+ES+AAKGGCLNG+FV+ATPF SS  K N                          L  
Sbjct: 943  MLMESVAAKGGCLNGEFVNATPFRSSVNKTN--------AGDEETNGETLVDELGSTLIK 994

Query: 848  HGFNSLGSEVLYSGVLGTELICEIFIGPVYYQRLRHMVSDKFQVRNTGAVDPTTRQPMXX 669
             GFN  G EVLYSGV GTEL CEIFIGPVYYQRLRHMVSDK+QVR+TG VD  TRQP+  
Sbjct: 995  KGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKG 1054

Query: 668  XXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVADVCSLCGSILTTSFIEPQKKA 489
                 GIRFGEMERDS+LAHGA+YLLHDRLHT SD H+ADVCSLCGS+LT+SF++P K+A
Sbjct: 1055 RKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSSFVQPPKRA 1114

Query: 488  GQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLAAELAAMNVKMTLNLSAGAS 312
             + I  + P    ++VTCHACKTSKGME VAMP+VF+YLAAELAAMN+KMTL LS+GA+
Sbjct: 1115 VREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLSSGAA 1173


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1179 bits (3049), Expect = 0.0
 Identities = 589/838 (70%), Positives = 680/838 (81%), Gaps = 3/838 (0%)
 Frame = -1

Query: 2819 KLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHEWLFKARRLLQDELSKKGQKF 2640
            KLF+ +D  +  DN D+LQN EVL PGHL+TIYLK+KL EWL KA+++LQ+E++K    F
Sbjct: 329  KLFSLVDQTSVVDNPDSLQNQEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNNN-F 387

Query: 2639 EFGSLVDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLDLQQKGGMTVQAERLNFLRFI 2460
             F S++DVKKV+D+NPS +I  A+E+MLKTGRL +Q GLDLQQ+ G TVQAERLNFLRF+
Sbjct: 388  NFLSVLDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFL 447

Query: 2459 SHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 2280
            S FR+VHRGA+FAG R TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHM  +CRITSYFDS
Sbjct: 448  SFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDS 507

Query: 2279 KGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLSVLLDGCVIGSISSNMVEKAV 2100
            +G +KDFF IR SIL VL  +GMT SLPKLV+AGPP+VLSVLLDG V+GSI S+ VEK V
Sbjct: 508  QGAVKDFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVV 567

Query: 2099 AHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSPSRFVRPV--ISLNAEKNHDI 1926
             H+R+LK++A+S IPDDLEVGYVPLS+GGA+PGLYLF+SPSRF+RPV  IS+ A +  +I
Sbjct: 568  VHLRRLKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENI 627

Query: 1925 ELIGPFEQVYMEIRCADGGEGGRTDDNPATHEEMHPTGLLSVVANLTPYSDHNQSPRNMY 1746
            ELIGPFEQV+MEIRC DGG GGR+D  PATHEE+HPT +LSVVANLTP+SDHNQSPRNMY
Sbjct: 628  ELIGPFEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMY 687

Query: 1745 QCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAYTKYNIDEFPTGTNAIVAVLA 1566
            QCQMAKQT+ FS Q+L+FRADQKLYHLQTPQTPIVRT +YTKY +DE+PTGTNAIVAVLA
Sbjct: 688  QCQMAKQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLA 747

Query: 1565 YTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGKSDHARQIFARSNIDKSVRSS 1386
            YTGYDMEDAMILNKSSVERGMCH  IYQ ETIDL E+  +SD A+++F RSNIDKS+ S 
Sbjct: 748  YTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSV 807

Query: 1385 VDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKQHKLKGSEPVTVDYVAVDVKHNPP-QKVX 1209
            +DSDGLPYVGQ++HP +PYCS  N ++   + +  KGS+PV VDYVA+D K+    QKV 
Sbjct: 808  IDSDGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHLQKVN 867

Query: 1208 XXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIG 1029
                      IGDKFSSRHGQKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSRMTI 
Sbjct: 868  IRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIA 927

Query: 1028 MLLESIAAKGGCLNGKFVDATPFPSSSRKENKELXXXXXXXXXXXXXXXXXXXXXXXLTS 849
            MLLES+AAKGG LNGKFVDATPF SS +  N                          L S
Sbjct: 928  MLLESLAAKGGSLNGKFVDATPFTSSVKNVN--------GGEAKSESESLVDDLGNMLRS 979

Query: 848  HGFNSLGSEVLYSGVLGTELICEIFIGPVYYQRLRHMVSDKFQVRNTGAVDPTTRQPMXX 669
            HGFN  G EVLYSGV GTEL CEIFIGPVYYQRLRHMVSDKFQVR+TG VD  TRQP+  
Sbjct: 980  HGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKG 1039

Query: 668  XXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVADVCSLCGSILTTSFIEPQKKA 489
                 GIRFGEMERD++LAHGAAYLLHDRLHT SD+H+ADVCSLCGSILTTSFI+ QK+ 
Sbjct: 1040 RKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQTQKRV 1099

Query: 488  GQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLAAELAAMNVKMTLNLSAGA 315
             + I  + P G  +KV CH+C+TSKGME VAMP+VFRYLAAELAAMN+KM + LS GA
Sbjct: 1100 VRDIGGLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNIKMNVQLSGGA 1157


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score = 1177 bits (3046), Expect = 0.0
 Identities = 590/838 (70%), Positives = 678/838 (80%), Gaps = 3/838 (0%)
 Frame = -1

Query: 2819 KLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHEWLFKARRLLQDELSKKGQKF 2640
            KLF+ ID  +  DN D+LQNHEVL PGHLIT+YLK+KL +WL K RRLL DE+ KK +KF
Sbjct: 343  KLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKF 402

Query: 2639 EFGSLVDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLDLQQKGGMTVQAERLNFLRFI 2460
            +F  +V VKKV+D+N  K + TA+E+MLKTGRL +Q GLDLQQ+ G TVQAERLNFLRF+
Sbjct: 403  DFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFL 462

Query: 2459 SHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDS 2280
            SHFR+VHRGA+FAG R T+VRKLLPE+WGFLCPVHTPDGEPCGLLNHM  T RITS+FDS
Sbjct: 463  SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDS 522

Query: 2279 KGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLSVLLDGCVIGSISSNMVEKAV 2100
            +GNIKD+FKI++SIL+VL+ VGMTPSLPK+   GPPE L+VLLDGCV+G I+S+ VEK V
Sbjct: 523  QGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVV 582

Query: 2099 AHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSPSRFVRPV--ISLNAEKNHDI 1926
            AHIR+LK+S+ + IPDD+EVGYVPLS+GGAYPGLYL +SPSRFVRPV  IS+ ++ + +I
Sbjct: 583  AHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENI 642

Query: 1925 ELIGPFEQVYMEIRCADGGEGGRTDDNPATHEEMHPTGLLSVVANLTPYSDHNQSPRNMY 1746
            ELIGPFEQV+MEIRC DGG+GGR    PATHEE+HPT +LSVVANLTP+SDHNQSPRNMY
Sbjct: 643  ELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMY 702

Query: 1745 QCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAYTKYNIDEFPTGTNAIVAVLA 1566
            QCQMAKQT+ FSSQ +Q RADQKLYHLQTPQTPIVRT  YTKYNIDEFPTGTNAIVAVLA
Sbjct: 703  QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLA 762

Query: 1565 YTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGKSDHARQIFARSNIDKSVRSS 1386
            YTGYDMEDAMILNKSSVERGM H  IYQ ETIDL EQ G+SD + ++F +SNI+KS   S
Sbjct: 763  YTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPS 822

Query: 1385 VDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKQHKLKGSEPVTVDYVAVDVKHNPP-QKVX 1209
            +DSDGLP+VGQ++ P +PYCS  N ++ +I   K KGSE V VDYVA DVK+    QKV 
Sbjct: 823  IDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVN 882

Query: 1208 XXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIG 1029
                      IGDKFSSRHGQKGVCSQLWPD+DMPFSGTTGMRPDLIINPHAFPSRMTI 
Sbjct: 883  IRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIA 942

Query: 1028 MLLESIAAKGGCLNGKFVDATPFPSSSRKENKELXXXXXXXXXXXXXXXXXXXXXXXLTS 849
            MLLES+AAKGG L G+FVDATPF SS  K++ E                        L  
Sbjct: 943  MLLESVAAKGGSLRGEFVDATPFRSSVTKDSGE---------SDSKSGSLVDDLGLLLRE 993

Query: 848  HGFNSLGSEVLYSGVLGTELICEIFIGPVYYQRLRHMVSDKFQVRNTGAVDPTTRQPMXX 669
             GFN  G EVLYSGV GTEL CEIFIGPVYYQRLRHMVSDKFQVR+TG +D  TRQP+  
Sbjct: 994  KGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKG 1053

Query: 668  XXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVADVCSLCGSILTTSFIEPQKKA 489
                 GIRFGEMERDSLLAHGAAYLLHDRLHT SD+H+ADVCSLCGS+L T+FI+PQK+ 
Sbjct: 1054 RKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRP 1113

Query: 488  GQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLAAELAAMNVKMTLNLSAGA 315
             + I  + P    +KVTCHAC+TSKGME VAMP+VFRYLAAELAAMN+KMTL LS GA
Sbjct: 1114 VREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGA 1171