BLASTX nr result
ID: Coptis23_contig00002709
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002709
(2074 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16... 292 2e-76
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2... 277 7e-72
ref|XP_002333929.1| predicted protein [Populus trichocarpa] gi|2... 271 6e-70
ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF16... 263 1e-67
ref|XP_004138647.1| PREDICTED: E3 ubiquitin-protein ligase RNF16... 263 1e-67
>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
Length = 446
Score = 292 bits (748), Expect = 2e-76
Identities = 165/293 (56%), Positives = 185/293 (63%)
Frame = -3
Query: 1427 IWLVPTFENSAWSIMAISFISLLAMSAVLATCFFVXXXXXXXXXXXXXXXREFHGMSSRL 1248
+W++P+FENSAWSIMAISFISLLAMSAVLATCFFV REFHGMSSRL
Sbjct: 154 LWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRQRPRVSRVREFHGMSSRL 213
Query: 1247 VRAMPSLIFTAVLEDNSTSRTCSICLEDYIVGERIRILPCRHKFHATCVDAWLTSWRTFC 1068
V+AMPSLIFT VLEDN TSRTC+ICLEDY VGE++RILPCRHKFHA CVD+WLTSWRTFC
Sbjct: 214 VKAMPSLIFTTVLEDNCTSRTCAICLEDYNVGEKLRILPCRHKFHAFCVDSWLTSWRTFC 273
Query: 1067 PVCKRDARTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIHIGQASSQXXX 888
PVCKRDART T AIHI + S
Sbjct: 274 PVCKRDARTST-GDPPSESTPLLSSSPGSLAPSSLVSSVRSSLASSSAIHIAPSPSPSHS 332
Query: 887 XXXXXXXXXXSTPYLSQSRRSYSNSPALSQSRSSVDLRNASSQRSYASQLVASQSLGYPS 708
+TPY+ QS +SY S +LS SRSS+DLRNASSQRS+AS LV+ S+GYPS
Sbjct: 333 LSVSRNNSLSATPYIQQSLQSYRQS-SLSVSRSSLDLRNASSQRSHASYLVSPHSMGYPS 391
Query: 707 LSPLNXXXXXXXXXXXXXXXXXXXXXXSRQPYLLHCSESATSFSPFASAQSLP 549
LSPLN SR P+ LH SESATSFSP+ SAQSLP
Sbjct: 392 LSPLNSRYLSPYIPSPSNASLSYVGSSSRPPHPLHYSESATSFSPYTSAQSLP 444
Score = 135 bits (339), Expect = 6e-29
Identities = 66/102 (64%), Positives = 81/102 (79%)
Frame = -2
Query: 1869 VVFILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDAC 1690
+V + C F++L+ S +NVVLIG NVTLS + ++ANFA VK SGECG+LY+AEP+DAC
Sbjct: 6 LVLLFCAFLNLMASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDAC 65
Query: 1689 SPLTNKIVPVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEA 1564
SPLTN + VEGA+ SP+VLIVRGGC FEDKVR AQ AGF A
Sbjct: 66 SPLTNAVEKVEGAS-SPFVLIVRGGCGFEDKVRNAQKAGFAA 106
>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
predicted protein [Populus trichocarpa]
Length = 437
Score = 277 bits (709), Expect = 7e-72
Identities = 158/293 (53%), Positives = 177/293 (60%)
Frame = -3
Query: 1427 IWLVPTFENSAWSIMAISFISLLAMSAVLATCFFVXXXXXXXXXXXXXXXREFHGMSSRL 1248
+W++P+FENSAWSIMAISFISLLAMSAVLATCFFV REFHGMSSRL
Sbjct: 150 LWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRSSRVREFHGMSSRL 209
Query: 1247 VRAMPSLIFTAVLEDNSTSRTCSICLEDYIVGERIRILPCRHKFHATCVDAWLTSWRTFC 1068
V+AMPSL FT+ LEDN TS TC+ICLEDY VGE++RILPCRHKFHA CVD+WLT+WRTFC
Sbjct: 210 VKAMPSLTFTSALEDNCTSTTCAICLEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFC 269
Query: 1067 PVCKRDARTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIHIGQASSQXXX 888
PVCKRDART T I + S
Sbjct: 270 PVCKRDARTSTGEPPATESTPLLSSNPSSLASSSMLSSFRSGTSTAIQITPSRTPS---- 325
Query: 887 XXXXXXXXXXSTPYLSQSRRSYSNSPALSQSRSSVDLRNASSQRSYASQLVASQSLGYPS 708
STPY QS RSY +SP+++ S+SS DLRN SS RS AS LV+ SLGYPS
Sbjct: 326 --VSYIPSLSSTPYAQQSLRSYRHSPSITLSQSSADLRNMSSLRSRASFLVSPHSLGYPS 383
Query: 707 LSPLNXXXXXXXXXXXXXXXXXXXXXXSRQPYLLHCSESATSFSPFASAQSLP 549
+SPLN SRQP LHCSESA SFSPFASA SLP
Sbjct: 384 ISPLN-TRYMSAYIPSPSNASPSLVSSSRQPRPLHCSESAASFSPFASAHSLP 435
Score = 113 bits (283), Expect = 2e-22
Identities = 59/104 (56%), Positives = 76/104 (73%)
Frame = -2
Query: 1875 GGVVFILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPID 1696
G VV +L + L +S NV+LIG NVT++ + +EANFA +K SGECGVLY+AEPID
Sbjct: 3 GVVVLLLSLLSCCLVAS--GNVLLIGNNVTMAFDDIEANFAPAIKGSGECGVLYLAEPID 60
Query: 1695 ACSPLTNKIVPVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEA 1564
ACS LTN+ + SP+VLI+R GC+FEDKVRRAQ AG++A
Sbjct: 61 ACSDLTNQAEKGSNCS-SPFVLIIREGCSFEDKVRRAQKAGYKA 103
>ref|XP_002333929.1| predicted protein [Populus trichocarpa] gi|222839169|gb|EEE77520.1|
predicted protein [Populus trichocarpa]
Length = 461
Score = 271 bits (692), Expect = 6e-70
Identities = 156/308 (50%), Positives = 176/308 (57%), Gaps = 14/308 (4%)
Frame = -3
Query: 1427 IWLVPTFENSAWSIMAISFISLLAMSAVLATCFFVXXXXXXXXXXXXXXXREFHGMSSRL 1248
+WL+P+FENSAWSIMAISFISLLAMSAVLATCFF+ REFHGMSSRL
Sbjct: 159 LWLIPSFENSAWSIMAISFISLLAMSAVLATCFFIRRHRIRREHSHSSRVREFHGMSSRL 218
Query: 1247 VRAMPSLIFTAVLEDNSTSRTCSICLEDYIVGERIRILPCRHKFHATCVDAWLTSWRTFC 1068
V+AMPSL FT+VLEDN TS TC+ICLEDY VGE++RILPCRHKFHA CVD+WLT+WRTFC
Sbjct: 219 VKAMPSLTFTSVLEDNCTSTTCAICLEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFC 278
Query: 1067 PVCKRDARTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIHIGQASSQXXX 888
PVCKRDART T I + S
Sbjct: 279 PVCKRDARTSTGDPPASESTPLLSSNPSSFASSSMLSSFRSGTSTAIQIASSRTPS---- 334
Query: 887 XXXXXXXXXXSTPYLSQSRRSYSNSPALSQSRSSVDLRNASSQRSYASQLVASQSLGYPS 708
STPY+ Q RSY +S ++S S SS DLR+ SSQRS S LV+ SLGYPS
Sbjct: 335 --VSHISSLSSTPYVQQPLRSYRHSTSISISHSSADLRHMSSQRSLTSHLVSPHSLGYPS 392
Query: 707 LSPLNXXXXXXXXXXXXXXXXXXXXXXSR--------------QPYLLHCSESATSFSPF 570
+SPLN + QP LHCSESA SFS F
Sbjct: 393 ISPLNTRYMSAYIPSPSNASPSLVSSSHQPRPLYCSESVSSSHQPRPLHCSESAASFSSF 452
Query: 569 ASAQSLPG 546
ASAQSLPG
Sbjct: 453 ASAQSLPG 460
Score = 113 bits (282), Expect = 2e-22
Identities = 61/104 (58%), Positives = 76/104 (73%)
Frame = -2
Query: 1875 GGVVFILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPID 1696
G VV +L + L +S +NVVLIG NVT++ +EANFA +K SGECGVL +AEPID
Sbjct: 3 GIVVLLLSLLSCCLVAS--ANVVLIGNNVTMAFNDIEANFAPAIKGSGECGVLSLAEPID 60
Query: 1695 ACSPLTNKIVPVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEA 1564
AC+ LTNK ++ SPYVLI+RGGC+FE KVRRAQ AGF+A
Sbjct: 61 ACTDLTNKAEKGLNSS-SPYVLIIRGGCSFEHKVRRAQKAGFKA 103
>ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus]
Length = 463
Score = 263 bits (672), Expect = 1e-67
Identities = 155/302 (51%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Frame = -3
Query: 1427 IWLVPTFENSAWSIMAISFISLLAMSAVLATCFFVXXXXXXXXXXXXXXXREFHGMSSRL 1248
IW+VP+FENSAWSIMAISFISLLAMSAVLATCFFV +EF GMS R+
Sbjct: 163 IWIVPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSHTQEFRGMSRRV 222
Query: 1247 VRAMPSLIFTAVLEDNSTSRTCSICLEDYIVGERIRILPCRHKFHATCVDAWLTSWRTFC 1068
V+AMPSLIFT LEDN TS TC+ICLEDY GE++RILPCRHKFHA CVD+WLT+WRTFC
Sbjct: 223 VKAMPSLIFTTALEDNCTSMTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFC 282
Query: 1067 PVCKRDARTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIHIGQASSQXXX 888
PVCKRDART T AI I A
Sbjct: 283 PVCKRDARTSTGDPPPSASTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPA---LRS 339
Query: 887 XXXXXXXXXXSTPYLSQS---------RRSYSNSPALSQSRSSVDLRNASSQRSYASQLV 735
STPYL QS R SY SP+LS SRSSV+LRNASSQRSY S L+
Sbjct: 340 PSVSRNHSLSSTPYLHQSLISSYHQSPRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLI 399
Query: 734 ASQSLGYPSLSPLNXXXXXXXXXXXXXXXXXXXXXXSRQPYLLHCSESATSFSPFASAQS 555
+ S YPS+SPL+ S Q LHCS SA S SPFAS +S
Sbjct: 400 SPYSSCYPSVSPLHSRYMIPHIPSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRS 459
Query: 554 LP 549
LP
Sbjct: 460 LP 461
Score = 114 bits (284), Expect = 1e-22
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2
Query: 1860 ILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDACSPL 1681
+L + +L S +NVVLIG NVTLS +S+EANFA +++SGE GVLY+A+P+DACS L
Sbjct: 19 LLFSLLLVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLDACSTL 78
Query: 1680 TNKIVPVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEA 1564
NK+V V SP+ LIVRGGC+FEDKVRRAQ AGF+A
Sbjct: 79 ENKVV-VPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKA 116
>ref|XP_004138647.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus]
Length = 451
Score = 263 bits (672), Expect = 1e-67
Identities = 155/302 (51%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Frame = -3
Query: 1427 IWLVPTFENSAWSIMAISFISLLAMSAVLATCFFVXXXXXXXXXXXXXXXREFHGMSSRL 1248
IW+VP+FENSAWSIMAISFISLLAMSAVLATCFFV +EF GMS R+
Sbjct: 151 IWIVPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSHTQEFRGMSRRV 210
Query: 1247 VRAMPSLIFTAVLEDNSTSRTCSICLEDYIVGERIRILPCRHKFHATCVDAWLTSWRTFC 1068
V+AMPSLIFT LEDN TS TC+ICLEDY GE++RILPCRHKFHA CVD+WLT+WRTFC
Sbjct: 211 VKAMPSLIFTTALEDNCTSMTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFC 270
Query: 1067 PVCKRDARTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIHIGQASSQXXX 888
PVCKRDART T AI I A
Sbjct: 271 PVCKRDARTSTGDPPPSASTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPA---LRS 327
Query: 887 XXXXXXXXXXSTPYLSQS---------RRSYSNSPALSQSRSSVDLRNASSQRSYASQLV 735
STPYL QS R SY SP+LS SRSSV+LRNASSQRSY S L+
Sbjct: 328 PSVSRNHSLSSTPYLHQSLISSYHQSPRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLI 387
Query: 734 ASQSLGYPSLSPLNXXXXXXXXXXXXXXXXXXXXXXSRQPYLLHCSESATSFSPFASAQS 555
+ S YPS+SPL+ S Q LHCS SA S SPFAS +S
Sbjct: 388 SPYSSCYPSVSPLHSRYMIPHIPSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRS 447
Query: 554 LP 549
LP
Sbjct: 448 LP 449
Score = 114 bits (284), Expect = 1e-22
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2
Query: 1860 ILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDACSPL 1681
+L + +L S +NVVLIG NVTLS +S+EANFA +++SGE GVLY+A+P+DACS L
Sbjct: 7 LLFSLLLVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLDACSTL 66
Query: 1680 TNKIVPVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEA 1564
NK+V V SP+ LIVRGGC+FEDKVRRAQ AGF+A
Sbjct: 67 ENKVV-VPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKA 104