BLASTX nr result

ID: Coptis23_contig00002706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002706
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283248.1| PREDICTED: octanoyltransferase [Vitis vinifera]   370   e-100
ref|XP_002297668.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002889518.1| hypothetical protein ARALYDRAFT_311551 [Arab...   362   7e-98
gb|AAB80636.1| Contains similarity to Mycobacterium LIPB gene (g...   359   5e-97
ref|NP_171958.1| lipoyl(octanoyl) transferase [Arabidopsis thali...   357   2e-96

>ref|XP_002283248.1| PREDICTED: octanoyltransferase [Vitis vinifera]
          Length = 235

 Score =  370 bits (951), Expect = e-100
 Identities = 184/236 (77%), Positives = 205/236 (86%)
 Frame = +2

Query: 200 MRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTYHNL 379
           MR+PR+L VWKMG VNYLDALKLQ+KL+S RK  KI DT+LSLQHPPTYTLGKRRT HNL
Sbjct: 1   MRVPRSLEVWKMGTVNYLDALKLQDKLISRRKTHKISDTVLSLQHPPTYTLGKRRTDHNL 60

Query: 380 LVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIEL 559
           LVPE+DL+T+GAELHYTQRGGDIT+HGPHQAILYPIISL+D GLGAR YVE LE  MIEL
Sbjct: 61  LVPESDLKTIGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLELTMIEL 120

Query: 560 ASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPCG 739
           ASLYGV A AG    ETGVWVG+RKIGAIGVRISSGITSHG+AFNIDPDLNYFKHIVPCG
Sbjct: 121 ASLYGVKARAG-GVGETGVWVGERKIGAIGVRISSGITSHGLAFNIDPDLNYFKHIVPCG 179

Query: 740 IADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSFGYDTLVQKENVAIALGKGESD 907
           IADKEVTSL+RET++VLP EEVI EQL+SCFAR F +  L+ KE+  I    GE++
Sbjct: 180 IADKEVTSLRRETDLVLPTEEVIHEQLISCFARLFCFSDLIWKEDAPILPDNGEAE 235


>ref|XP_002297668.1| predicted protein [Populus trichocarpa] gi|222844926|gb|EEE82473.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  370 bits (949), Expect = e-100
 Identities = 181/239 (75%), Positives = 204/239 (85%)
 Frame = +2

Query: 200 MRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTYHNL 379
           M  PR+L VWK+G VNYL+ALKLQEKLV DRK  KIPDT+LSLQHPPTYTLGKRRT HNL
Sbjct: 1   MIFPRSLEVWKLGKVNYLEALKLQEKLVCDRKAYKIPDTLLSLQHPPTYTLGKRRTDHNL 60

Query: 380 LVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIEL 559
           L+P  +L  +GAELHYTQRGGDITYHGPHQAILYPIISL+D GLGARKYVE LE  MI++
Sbjct: 61  LIPVPELEKIGAELHYTQRGGDITYHGPHQAILYPIISLRDIGLGARKYVEKLELTMIDM 120

Query: 560 ASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPCG 739
           AS YGV A AG  KCETGVWVGDRKIGAIGVRISSGITSHG+AFN+DPDL+YFKHIVPCG
Sbjct: 121 ASQYGVKACAG-KKCETGVWVGDRKIGAIGVRISSGITSHGLAFNVDPDLDYFKHIVPCG 179

Query: 740 IADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSFGYDTLVQKENVAIALGKGESDENL 916
           IADKEVTSL+RET  VLP+EEVI EQL+SCFAR FG++ L+ KEN    L  G+ + ++
Sbjct: 180 IADKEVTSLRRETGTVLPSEEVIHEQLISCFARIFGFNNLIWKENEPTLLDNGKPERHV 238


>ref|XP_002889518.1| hypothetical protein ARALYDRAFT_311551 [Arabidopsis lyrata subsp.
           lyrata] gi|297335360|gb|EFH65777.1| hypothetical protein
           ARALYDRAFT_311551 [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  362 bits (929), Expect = 7e-98
 Identities = 177/231 (76%), Positives = 200/231 (86%)
 Frame = +2

Query: 197 EMRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTYHN 376
           EMR PR L VWK+G VNYL +LKLQEKLVS+RK   IPDT+LSLQHPPTYTLGKRRT HN
Sbjct: 98  EMRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHHIPDTLLSLQHPPTYTLGKRRTDHN 157

Query: 377 LLVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIE 556
           LL+PE++L  +GAELHYTQRGGDIT+HGPHQAILYPIISL+  G GAR YVE LE  MIE
Sbjct: 158 LLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE 217

Query: 557 LASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPC 736
            AS+YGV A AG NKCETGVWVGDRKIGAIGVRISSGITSHG+AFNIDPDL YF+HIVPC
Sbjct: 218 FASIYGVKARAG-NKCETGVWVGDRKIGAIGVRISSGITSHGLAFNIDPDLKYFEHIVPC 276

Query: 737 GIADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSFGYDTLVQKENVAIAL 889
           GIADKEVTSL+RET+ +LP+EEVI EQLVSC A++F YD +V KE+ ++ L
Sbjct: 277 GIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAFSYDDVVWKEDPSVIL 327


>gb|AAB80636.1| Contains similarity to Mycobacterium LIPB gene (gb|Q104041)
           [Arabidopsis thaliana]
          Length = 333

 Score =  359 bits (922), Expect = 5e-97
 Identities = 175/231 (75%), Positives = 200/231 (86%)
 Frame = +2

Query: 197 EMRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTYHN 376
           EMR PR L VWK+G VNYL +LKLQEKLVS+RK  +IPDT+LSLQHPPTYTLGKRRT HN
Sbjct: 98  EMRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHN 157

Query: 377 LLVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIE 556
           LL+PE++L  +GAELHYTQRGGDIT+HGPHQAILYPIISL+  G GAR YVE LE  MIE
Sbjct: 158 LLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE 217

Query: 557 LASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPC 736
            AS+YGV A AG NKCETGVWVGDRKIGAIGVRISSGITSHG+A NIDPD+ YF+HIVPC
Sbjct: 218 FASIYGVKARAG-NKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPC 276

Query: 737 GIADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSFGYDTLVQKENVAIAL 889
           GIADKEVTSL+RET+ +LP+EEVI EQLVSC A++F YD +V KE+ ++ L
Sbjct: 277 GIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAFSYDDVVWKEDPSLIL 327


>ref|NP_171958.1| lipoyl(octanoyl) transferase [Arabidopsis thaliana]
           gi|79316647|ref|NP_001030961.1| lipoyl(octanoyl)
           transferase [Arabidopsis thaliana]
           gi|75213274|sp|Q9SXP7.1|LIPB_ARATH RecName:
           Full=Octanoyltransferase; AltName: Full=Lipoate
           biosynthesis protein; AltName: Full=Lipoate-protein
           ligase; AltName: Full=Lipoyl ligase; AltName:
           Full=Lipoyl/octanoyl transferase; AltName:
           Full=Octanoyl-[acyl-carrier-protein]-protein
           N-octanoyltransferase
           gi|16226271|gb|AAL16120.1|AF428288_1 At1g04640/T1G11_10
           [Arabidopsis thaliana] gi|4996286|dbj|BAA78386.1|
           lipoyltransferase [Arabidopsis thaliana]
           gi|22137226|gb|AAM91458.1| At1g04640/T1G11_10
           [Arabidopsis thaliana] gi|332189605|gb|AEE27726.1|
           lipoyl(octanoyl) transferase [Arabidopsis thaliana]
           gi|332189606|gb|AEE27727.1| lipoyl(octanoyl) transferase
           [Arabidopsis thaliana]
          Length = 235

 Score =  357 bits (917), Expect = 2e-96
 Identities = 174/230 (75%), Positives = 199/230 (86%)
 Frame = +2

Query: 200 MRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTYHNL 379
           MR PR L VWK+G VNYL +LKLQEKLVS+RK  +IPDT+LSLQHPPTYTLGKRRT HNL
Sbjct: 1   MRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHNL 60

Query: 380 LVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIEL 559
           L+PE++L  +GAELHYTQRGGDIT+HGPHQAILYPIISL+  G GAR YVE LE  MIE 
Sbjct: 61  LIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIEF 120

Query: 560 ASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPCG 739
           AS+YGV A AG NKCETGVWVGDRKIGAIGVRISSGITSHG+A NIDPD+ YF+HIVPCG
Sbjct: 121 ASIYGVKARAG-NKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCG 179

Query: 740 IADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSFGYDTLVQKENVAIAL 889
           IADKEVTSL+RET+ +LP+EEVI EQLVSC A++F YD +V KE+ ++ L
Sbjct: 180 IADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAFSYDDVVWKEDPSLIL 229


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