BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002704
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              89   6e-26
emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]    83   1e-25
emb|CAN84021.1| hypothetical protein VITISV_032575 [Vitis vinifera]    82   2e-25
emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]    82   2e-25
emb|CAN67782.1| hypothetical protein VITISV_004473 [Vitis vinifera]    82   2e-25

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 89.0 bits (219), Expect(2) = 6e-26
 Identities = 50/126 (39%), Positives = 74/126 (58%)
 Frame = -3

Query: 621 MLKWAVMLSSYEIQYQVRTAEKAQAVAEFLAEFPAEDPTWGXXXXXXXXXXXELGSLNPW 442
           + KWAV LS Y+I+++ R + KAQ +A+FL E P                    G++   
Sbjct: 405 LAKWAVELSEYDIEFKSRISMKAQVLADFLTELPIP------------------GTIER- 445

Query: 441 DERNGWRVFADGSATDASSGIGVVLVTPDNNRLELTMKLGFAASNNEAEYEAVIAGMRMA 262
            E   W++  DGS+T   S +G+ L +P +  LE + +L F ASNNEAEYEA+IAG+R+A
Sbjct: 446 PENQTWKLHVDGSSTKQGSVVGIKLESPTSEILEQSFRLLFDASNNEAEYEALIAGLRLA 505

Query: 261 EGLG*K 244
           +G+G K
Sbjct: 506 QGVGAK 511



 Score = 54.3 bits (129), Expect(2) = 6e-26
 Identities = 29/80 (36%), Positives = 43/80 (53%)
 Frame = -2

Query: 247 KELTVYSDSNLVVCQANGGFATRCPRMARYLGVLRSWASKFAQIRFVHLNRGENRHADAL 68
           KE+  Y DS LVV Q NG +  +  RM  YL V +  +  F++   + + RGEN  ADAL
Sbjct: 511 KEILAYCDSQLVVNQFNGDYEAKDSRMEAYLEVAKDLSKNFSKFELIRILRGENTTADAL 570

Query: 67  AYVAAAMPGSEERTTEVKTL 8
           A +A+      +R   V+ +
Sbjct: 571 AALASTSDPGLKRVIPVECI 590


>emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]
          Length = 969

 Score = 82.8 bits (203), Expect(2) = 1e-25
 Identities = 42/123 (34%), Positives = 71/123 (57%)
 Frame = -3

Query: 621 MLKWAVMLSSYEIQYQVRTAEKAQAVAEFLAEFPAEDPTWGXXXXXXXXXXXELGSLNPW 442
           ML+WA+ LS + I++Q R ++K Q +A+F+ E+                        +  
Sbjct: 406 MLQWAIELSEFGIEFQPRLSKKGQVMADFVLEYSRRP-----------------NQHHES 448

Query: 441 DERNGWRVFADGSATDASSGIGVVLVTPDNNRLELTMKLGFAASNNEAEYEAVIAGMRMA 262
            E+  W +  DG++  +SSG+G++L +P    LE  ++LGF+ASNNEAEYEA+++G+ +A
Sbjct: 449 SEQEWWTLRVDGASRSSSSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLA 508

Query: 261 EGL 253
             L
Sbjct: 509 LAL 511



 Score = 59.7 bits (143), Expect(2) = 1e-25
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = -2

Query: 250 VKELTVYSDSNLVVCQANGGFATRCPRMARYLGVLRSWASKFAQIRFVHLNRGENRHADA 71
           V +L +YSDS LVV      +  +  RMARYL  +RS   +F +     + R +NRHADA
Sbjct: 513 VSKLRIYSDSQLVVRHVQKEYEAKDSRMARYLAKVRSTLQQFTEWTIEKIKRADNRHADA 572

Query: 70  LAYVAAAMPGSE 35
           LA +AA++P  E
Sbjct: 573 LAGIAASLPIKE 584


>emb|CAN84021.1| hypothetical protein VITISV_032575 [Vitis vinifera]
          Length = 962

 Score = 82.4 bits (202), Expect(2) = 2e-25
 Identities = 42/123 (34%), Positives = 70/123 (56%)
 Frame = -3

Query: 621 MLKWAVMLSSYEIQYQVRTAEKAQAVAEFLAEFPAEDPTWGXXXXXXXXXXXELGSLNPW 442
           ML+WA+ LS + I++Q R ++K Q +A+F+ E+                        +  
Sbjct: 375 MLQWAIELSEFGIEFQPRLSKKGQVMADFVLEYSRRP-----------------NQHHES 417

Query: 441 DERNGWRVFADGSATDASSGIGVVLVTPDNNRLELTMKLGFAASNNEAEYEAVIAGMRMA 262
            E+  W +  DG++  + SG+G+VL +P    LE  ++LGF+ASNNEAEYEA+++G+ +A
Sbjct: 418 SEQEWWTLRVDGASRSSGSGVGLVLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLA 477

Query: 261 EGL 253
             L
Sbjct: 478 LAL 480



 Score = 59.3 bits (142), Expect(2) = 2e-25
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = -2

Query: 250 VKELTVYSDSNLVVCQANGGFATRCPRMARYLGVLRSWASKFAQIRFVHLNRGENRHADA 71
           V +L +YSDS LVV      +  +  RMARYL  +RS   +F +     + R +NRHADA
Sbjct: 482 VSKLRIYSDSQLVVRHIQKEYEAKDSRMARYLAKVRSTLQQFTEWTIEKIKRADNRHADA 541

Query: 70  LAYVAAAMPGSE 35
           LA +AA++P  E
Sbjct: 542 LAGIAASLPIKE 553


>emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]
          Length = 944

 Score = 82.4 bits (202), Expect(2) = 2e-25
 Identities = 42/123 (34%), Positives = 70/123 (56%)
 Frame = -3

Query: 621 MLKWAVMLSSYEIQYQVRTAEKAQAVAEFLAEFPAEDPTWGXXXXXXXXXXXELGSLNPW 442
           ML+WA+ LS + I++Q R ++K Q +A+F+ E+                        +  
Sbjct: 432 MLQWAIELSEFGIEFQPRLSKKGQVMADFVLEYSRRP-----------------NQHHES 474

Query: 441 DERNGWRVFADGSATDASSGIGVVLVTPDNNRLELTMKLGFAASNNEAEYEAVIAGMRMA 262
            E+  W +  DG++  + SG+G+VL +P    LE  ++LGF+ASNNEAEYEA+++G+ +A
Sbjct: 475 SEQEWWTLRVDGASRSSGSGVGLVLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLA 534

Query: 261 EGL 253
             L
Sbjct: 535 LAL 537



 Score = 59.3 bits (142), Expect(2) = 2e-25
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = -2

Query: 250 VKELTVYSDSNLVVCQANGGFATRCPRMARYLGVLRSWASKFAQIRFVHLNRGENRHADA 71
           V +L +YSDS LVV      +  +  RMARYL  +RS   +F +     + R +NRHADA
Sbjct: 539 VSKLRIYSDSQLVVRHIQKEYEAKDSRMARYLAKVRSTLQQFTEWTIEKIKRADNRHADA 598

Query: 70  LAYVAAAMPGSE 35
           LA +AA++P  E
Sbjct: 599 LAGIAASLPIKE 610


>emb|CAN67782.1| hypothetical protein VITISV_004473 [Vitis vinifera]
          Length = 938

 Score = 82.4 bits (202), Expect(2) = 2e-25
 Identities = 42/123 (34%), Positives = 70/123 (56%)
 Frame = -3

Query: 621 MLKWAVMLSSYEIQYQVRTAEKAQAVAEFLAEFPAEDPTWGXXXXXXXXXXXELGSLNPW 442
           ML+WA+ LS + I++Q R ++K Q +A+F+ E+                        +  
Sbjct: 382 MLQWAIELSEFGIEFQPRLSKKGQVMADFVLEYSRRP-----------------NQHHES 424

Query: 441 DERNGWRVFADGSATDASSGIGVVLVTPDNNRLELTMKLGFAASNNEAEYEAVIAGMRMA 262
            E+  W +  DG++  + SG+G+VL +P    LE  ++LGF+ASNNEAEYEA+++G+ +A
Sbjct: 425 SEQEWWTLRVDGASRSSGSGVGLVLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLA 484

Query: 261 EGL 253
             L
Sbjct: 485 LAL 487



 Score = 59.3 bits (142), Expect(2) = 2e-25
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = -2

Query: 250 VKELTVYSDSNLVVCQANGGFATRCPRMARYLGVLRSWASKFAQIRFVHLNRGENRHADA 71
           V +L +YSDS LVV      +  +  RMARYL  +RS   +F +     + R +NRHADA
Sbjct: 489 VSKLRIYSDSQLVVRHIQKEYEAKDSRMARYLAKVRSTLQQFTEWTIEKIKRADNRHADA 548

Query: 70  LAYVAAAMPGSE 35
           LA +AA++P  E
Sbjct: 549 LAGIAASLPIKE 560