BLASTX nr result

ID: Coptis23_contig00002697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002697
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21837.3| unnamed protein product [Vitis vinifera]               72   6e-11
gb|ABK94484.1| unknown [Populus trichocarpa] gi|118488375|gb|ABK...    59   3e-07
ref|XP_002319899.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
emb|CAN73945.1| hypothetical protein VITISV_032245 [Vitis vinifera]    57   1e-06

>emb|CBI21837.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = -2

Query: 353 KMANFERQFKEKAKDLKVLFKKSVKIVAESCKKGWYKVKHIKG*DLLLWLV 201
           KMA FE+Q KE+A++LK  FKK VKIV +SCKKGWYKV+H++G    +W+V
Sbjct: 329 KMAEFEKQLKERARELKTFFKKGVKIVGDSCKKGWYKVRHMRG---YVWMV 376


>gb|ABK94484.1| unknown [Populus trichocarpa] gi|118488375|gb|ABK96005.1| unknown
           [Populus trichocarpa]
          Length = 43

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 350 MANFERQFKEKAKDLKVLFKKSVKIVAESCKKGWYKVKHIK 228
           M +FE + K +AK+L VLFKK VKIV ESCKKGW KVK++K
Sbjct: 1   MGDFENKVKVRAKELTVLFKKGVKIVGESCKKGWIKVKNMK 41


>ref|XP_002319899.1| predicted protein [Populus trichocarpa] gi|222858275|gb|EEE95822.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -2

Query: 350 MANFERQFKEKAKDLKVLFKKSVKIVAESCKKGWYKVKHI 231
           M +FE+Q KE+AK+LKVLF K VKIV  SCKKGW K+  +
Sbjct: 1   MGDFEKQVKERAKELKVLFTKGVKIVENSCKKGWKKISQV 40


>emb|CAN73945.1| hypothetical protein VITISV_032245 [Vitis vinifera]
          Length = 896

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
 Frame = -2

Query: 353 KMANFERQFKEKAKDLKVLFKKSVKIVAESCKKG----WYKVKHIKG*DLLLWLVLR 195
           KMA FE+Q KE+A++LK  FKK VKIV +SCKKG    W    HI+   + LWL  R
Sbjct: 271 KMAEFEKQLKERARELKTFFKKGVKIVGDSCKKGCQWRWQWKSHIR---MALWLGFR 324


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