BLASTX nr result

ID: Coptis23_contig00002692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002692
         (1706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246...   356   9e-96
ref|XP_002510750.1| protein with unknown function [Ricinus commu...   356   9e-96
emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]   356   9e-96
ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|1...   348   3e-93
ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|2...   345   3e-92

>ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246080 [Vitis vinifera]
          Length = 247

 Score =  356 bits (914), Expect = 9e-96
 Identities = 173/238 (72%), Positives = 196/238 (82%), Gaps = 6/238 (2%)
 Frame = +2

Query: 449  DHLCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIR 628
            DHL PPWLKP+L+A+YF+PC  HGDS+KSECNMFCLDC+G ALCSYCLIHHKDH +VQIR
Sbjct: 11   DHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVVQIR 70

Query: 629  RSSYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD 808
            RSSYHNV+RVNEIQKYIDI+ VQTY+INSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD
Sbjct: 71   RSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD 130

Query: 809  SFRFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL---DSDDSSTPKKFPKTSGFSRFFNM 979
            SFRFCSLGCKLGAMKRGD  LTF L+ KH R+     +SD+SSTP+KF +T  FSR   +
Sbjct: 131  SFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSRLM-I 189

Query: 980  DDTRQLLSFSSDAN---NNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1144
            D     L    DA    + +  +SSGDE  +NISPATPPI N+ N+RRRKGIPHRAPF
Sbjct: 190  DGPTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRKGIPHRAPF 247


>ref|XP_002510750.1| protein with unknown function [Ricinus communis]
            gi|223551451|gb|EEF52937.1| protein with unknown function
            [Ricinus communis]
          Length = 235

 Score =  356 bits (914), Expect = 9e-96
 Identities = 172/234 (73%), Positives = 194/234 (82%), Gaps = 4/234 (1%)
 Frame = +2

Query: 455  LCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIRRS 634
            L PPWL+P+L+A+YF+PC FHGDS+KSECN+FCLDC+G ALCSYCLI+HKDH IVQIRRS
Sbjct: 13   LGPPWLRPMLRASYFVPCSFHGDSNKSECNLFCLDCMGNALCSYCLINHKDHRIVQIRRS 72

Query: 635  SYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSF 814
            SYHNV+RVNEIQKYIDI+ VQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSF
Sbjct: 73   SYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSF 132

Query: 815  RFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL----DSDDSSTPKKFPKTSGFSRFFNMD 982
            RFCSLGCKLG MKRGD  LTF LR KH+RD      +SD+SSTPKK  KT  F+R  +  
Sbjct: 133  RFCSLGCKLGGMKRGDPDLTFTLRMKHNRDPFLGGSESDESSTPKKIRKTHAFNRLMD-- 190

Query: 983  DTRQLLSFSSDANNNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1144
                L  +SSD +      SSGDE  +NISP+TPPI N+RN+RRRKGIPHRAPF
Sbjct: 191  ---GLSIYSSDGH------SSGDEATTNISPSTPPIYNHRNARRRKGIPHRAPF 235


>emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]
          Length = 240

 Score =  356 bits (914), Expect = 9e-96
 Identities = 173/238 (72%), Positives = 196/238 (82%), Gaps = 6/238 (2%)
 Frame = +2

Query: 449  DHLCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIR 628
            DHL PPWLKP+L+A+YF+PC  HGDS+KSECNMFCLDC+G ALCSYCLIHHKDH +VQIR
Sbjct: 4    DHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVVQIR 63

Query: 629  RSSYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD 808
            RSSYHNV+RVNEIQKYIDI+ VQTY+INSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD
Sbjct: 64   RSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD 123

Query: 809  SFRFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL---DSDDSSTPKKFPKTSGFSRFFNM 979
            SFRFCSLGCKLGAMKRGD  LTF L+ KH R+     +SD+SSTP+KF +T  FSR   +
Sbjct: 124  SFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSRLM-I 182

Query: 980  DDTRQLLSFSSDAN---NNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1144
            D     L    DA    + +  +SSGDE  +NISPATPPI N+ N+RRRKGIPHRAPF
Sbjct: 183  DGPTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRKGIPHRAPF 240


>ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|118489570|gb|ABK96587.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222856458|gb|EEE94005.1| predicted protein [Populus
            trichocarpa]
          Length = 238

 Score =  348 bits (892), Expect = 3e-93
 Identities = 165/232 (71%), Positives = 189/232 (81%), Gaps = 4/232 (1%)
 Frame = +2

Query: 461  PPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIRRSSY 640
            PPWL P+L+A+YFIPC  HG+S+KSECNMFCLDC+G A CSYCLI+HKDH +VQIRRSSY
Sbjct: 15   PPWLIPMLRASYFIPCGVHGESNKSECNMFCLDCMGNAFCSYCLIYHKDHRVVQIRRSSY 74

Query: 641  HNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF 820
            HNV+RVNEIQKYIDI+ VQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF
Sbjct: 75   HNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF 134

Query: 821  CSLGCKLGAMKRGDLSLTFILRQKHSRDAL----DSDDSSTPKKFPKTSGFSRFFNMDDT 988
            CSLGCKLG MKRGD  LTF ++ KH+RD      +SD+SSTPKK  +T  F+R       
Sbjct: 135  CSLGCKLGGMKRGDPDLTFAVKLKHNRDPFFGGSESDESSTPKKIRRTHAFNRLME---- 190

Query: 989  RQLLSFSSDANNNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1144
                  S  ++NN+   SSGD+  +NISPATPPI N+RN+RRRKGIPHRAPF
Sbjct: 191  ----GLSIYSSNNDGAESSGDDAATNISPATPPIFNHRNARRRKGIPHRAPF 238


>ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|222843616|gb|EEE81163.1|
            predicted protein [Populus trichocarpa]
          Length = 238

 Score =  345 bits (884), Expect = 3e-92
 Identities = 163/232 (70%), Positives = 189/232 (81%), Gaps = 4/232 (1%)
 Frame = +2

Query: 461  PPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIRRSSY 640
            PPWL P+L+A+YFIPC  HG+S+KSECNMFCLDC+G A CSYCLI+H+DH +VQIRRSSY
Sbjct: 15   PPWLIPMLRASYFIPCAVHGESNKSECNMFCLDCMGNAFCSYCLIYHRDHRVVQIRRSSY 74

Query: 641  HNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF 820
            HNV+RVNEIQKYIDI+ VQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF
Sbjct: 75   HNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF 134

Query: 821  CSLGCKLGAMKRGDLSLTFILRQKHSRDAL----DSDDSSTPKKFPKTSGFSRFFNMDDT 988
            CSLGCKLG MKRGD  LTF L+ K +RD      +SD+SSTPKK  +T  F+R  +    
Sbjct: 135  CSLGCKLGGMKRGDPDLTFALKLKQNRDPFFGGSESDESSTPKKIRRTHAFNRLMD---- 190

Query: 989  RQLLSFSSDANNNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1144
                  S  ++NN+   SSGD+  +NISPATPP+ N+RN+RRRKGIPHRAPF
Sbjct: 191  ----GLSIYSSNNDGAESSGDDAATNISPATPPLFNHRNARRRKGIPHRAPF 238


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