BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002689
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   546   e-153
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   545   e-152
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...   538   e-151
ref|XP_002891277.1| transcription factor [Arabidopsis lyrata sub...   520   e-145

>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  553 bits (1426), Expect = e-155
 Identities = 273/357 (76%), Positives = 313/357 (87%)
 Frame = +1

Query: 25   MSRMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVYS 204
            MS  ++QPVGQKRLTNVAVVRLKKHG+RFEIAC+KNKVLS+RSGVEKDLDEVLQSHTVYS
Sbjct: 1    MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 205  NVSKGVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSTQFRDIATIVMQK 384
            NVSKGVLAK+ +L  AFG DDH+KICLEIL+KGELQVAGKER+SQLS+QFRDIATIVMQK
Sbjct: 61   NVSKGVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQK 120

Query: 385  TINPETQRPYTISMIERLMHEIHFALDPHNSSKKQALEVIRELQKQFPIKRAPMRLRLII 564
            TINPETQRPYTISM+ERLMHEIHFA+DPH+SSKKQAL+VIRELQK FPIKR+PMRLRL +
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAV 180

Query: 565  PQEKFTLLSEKLNAWKTNIVSKDESGEHLSVVCEIEPSYFRDCDAMVSNLQGRVEILAVS 744
              +KF  L EKLNAW  N+VSKDESG H SV+CE++P +FRDCDA+V NLQGR+EILAVS
Sbjct: 181  IGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVS 240

Query: 745  VHFEGDTSVDHYDDQEEFSSSHSKVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCST 924
            VHFEGDT VD +DD E+   +  K   D+ V+LS+K+QKQ ISE        AKQNKCST
Sbjct: 241  VHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISE-EKKADTLAKQNKCST 299

Query: 925  CDAVIGDAKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 1095
            C+A +GDAKQ+RDHFKS+WHKHNLKRKT+QLPPLTAEEC+AD++L D K DLKEYSF
Sbjct: 300  CNAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF 356


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  546 bits (1408), Expect = e-153
 Identities = 268/357 (75%), Positives = 310/357 (86%)
 Frame = +1

Query: 25   MSRMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVYS 204
            MS+ ++QP+GQKRLTNVAVVRLKKHG RFEIAC+KNKVLS+RSGVEKDLDEVLQSHTVYS
Sbjct: 1    MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 205  NVSKGVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSTQFRDIATIVMQK 384
            NVSKGVLAKS++L  AFGTDD +KICLEIL+KGELQVAGKERESQL++QFRDIAT+VMQK
Sbjct: 61   NVSKGVLAKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQK 120

Query: 385  TINPETQRPYTISMIERLMHEIHFALDPHNSSKKQALEVIRELQKQFPIKRAPMRLRLII 564
            T+NPETQRPYTISMIERLMHEIHFA+DPH+SSKKQALEVIRELQK FPIKR+PMRLRL I
Sbjct: 121  TVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAI 180

Query: 565  PQEKFTLLSEKLNAWKTNIVSKDESGEHLSVVCEIEPSYFRDCDAMVSNLQGRVEILAVS 744
             +   + L EKLN W   +VSKDESG  LSV+CE++P  FR+CD +V NLQGR+EILA+S
Sbjct: 181  SEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQGRLEILAMS 240

Query: 745  VHFEGDTSVDHYDDQEEFSSSHSKVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCST 924
            VHFEGD  VD YDD E+  +S  K  TD+VV+LS+K+QKQ IS    + G E KQ+KC+T
Sbjct: 241  VHFEGDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQTISAEKKNEG-EVKQHKCNT 299

Query: 925  CDAVIGDAKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 1095
            C+A +GDAK+YRDHFKSEWHKHNL+RKTR L PLTAEEC+ADVEL D K DLK+YSF
Sbjct: 300  CNAFVGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKADLKDYSF 356


>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  545 bits (1403), Expect = e-152
 Identities = 269/358 (75%), Positives = 309/358 (86%), Gaps = 1/358 (0%)
 Frame = +1

Query: 25   MSRMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVYS 204
            MSR++ QP+GQKRLTNVAVVRLKK G+RFEIAC+KNKVLS+RSGVEKDLDEVLQSH VYS
Sbjct: 1    MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60

Query: 205  NVSKGVLAKSRELNLAFGTD-DHSKICLEILDKGELQVAGKERESQLSTQFRDIATIVMQ 381
            NVSKGVLAKS++L  AFG + D ++I LEILDKGELQVAGKERESQLS+QFRDIATIVMQ
Sbjct: 61   NVSKGVLAKSKDLEAAFGKERDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 382  KTINPETQRPYTISMIERLMHEIHFALDPHNSSKKQALEVIRELQKQFPIKRAPMRLRLI 561
            KTINPETQRPYT SMIERLMHEIHF++DP++SSKKQALEVIRELQK FPIKR PMRLRL 
Sbjct: 121  KTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRLT 180

Query: 562  IPQEKFTLLSEKLNAWKTNIVSKDESGEHLSVVCEIEPSYFRDCDAMVSNLQGRVEILAV 741
            +PQ+ F+ L EKLN W  +IVSKDESG  LS++CE+EP  FRDCDA+V NLQGR+EILAV
Sbjct: 181  VPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQGRLEILAV 240

Query: 742  SVHFEGDTSVDHYDDQEEFSSSHSKVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCS 921
            S+H EGDT VD YDD E   S   K   D V++LS+KVQ+Q IS G+ ST  E KQNKCS
Sbjct: 241  SLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQTISVGSSSTEGEVKQNKCS 300

Query: 922  TCDAVIGDAKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 1095
            TCDA +GD+KQYR+HFKSEWHKHNL RKTRQLPPL+AEEC+ D+E+ D+K DLK+YSF
Sbjct: 301  TCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKADLKDYSF 358


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  538 bits (1387), Expect = e-151
 Identities = 264/358 (73%), Positives = 307/358 (85%), Gaps = 1/358 (0%)
 Frame = +1

Query: 25   MSRMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSH-TVY 201
            MS  + QPVGQKRLTNVAVVRLKKHG+RFEIAC+KNKVLS+RSGVEKDLDEVLQSH TVY
Sbjct: 1    MSVKLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVY 60

Query: 202  SNVSKGVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSTQFRDIATIVMQ 381
            SNVSKG+LAKS +LN AFG DD ++ICLEILDKGELQVAGKERESQLS+QFRDIATIVMQ
Sbjct: 61   SNVSKGILAKSLDLNKAFGHDDQTRICLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 382  KTINPETQRPYTISMIERLMHEIHFALDPHNSSKKQALEVIRELQKQFPIKRAPMRLRLI 561
            KTINPETQRPYTISMIERLMHE HFA++PHNSSKKQAL+VIRELQK FPIKR+PMRL L 
Sbjct: 121  KTINPETQRPYTISMIERLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKRSPMRLGLT 180

Query: 562  IPQEKFTLLSEKLNAWKTNIVSKDESGEHLSVVCEIEPSYFRDCDAMVSNLQGRVEILAV 741
            +  + F+ L EKL AW  N+VSKDESG   S++CE++P +FRDCD +V NLQGR+EILAV
Sbjct: 181  VSGQNFSTLLEKLGAWDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNLQGRLEILAV 240

Query: 742  SVHFEGDTSVDHYDDQEEFSSSHSKVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCS 921
            SVHFE DT VD YDD E+  S+  K  TD+ V+LS+K+QKQ +S+     GAE KQNKCS
Sbjct: 241  SVHFEEDTHVDDYDDYEDVPSALPKGSTDSAVQLSEKIQKQTLSD-EKKAGAEVKQNKCS 299

Query: 922  TCDAVIGDAKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 1095
            TC+  +GDAKQ+RDHFKS+WHKHNLKRKT+QLPPLT+EEC+ D+++ D   D+KEYSF
Sbjct: 300  TCNVSVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTSEECLGDMDMNDSNTDIKEYSF 357


>ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297337119|gb|EFH67536.1| transcription factor
            [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  520 bits (1338), Expect = e-145
 Identities = 253/370 (68%), Positives = 311/370 (84%), Gaps = 13/370 (3%)
 Frame = +1

Query: 25   MSRMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVYS 204
            MS+ +VQPVGQKRLTNVAVVRLKK G RFEIAC+KNKVLS+RSGVEKD+DEVLQSHTVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 205  NVSKGVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSTQFRDIATIVMQK 384
            NVSKGVLAKS++L  AFG+DDH+KIC++IL+KGELQVAGKERESQ S+QFRDIATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKAFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 385  TINPETQRPYTISMIERLMHEIHFALDPHNSSKKQALEVIRELQKQFPIKRAPMRLRLII 564
            TINPETQRPYTI M+ERLMHEIHFA+DPH++SKKQAL+VIRELQKQFPIKR+PMRLRL +
Sbjct: 121  TINPETQRPYTIGMVERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRSPMRLRLTV 180

Query: 565  PQEKFTLLSEKLNAWKTNIVSKDESGEHLSVVCEIEPSYFRDCDAMVSNLQGRVEILAVS 744
            P + F  L EKL  W+ ++VSKDESG  +S VCE+EP  FR+CD+ V N+QGR+EILAVS
Sbjct: 181  PVQNFPSLLEKLKEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRNMQGRLEILAVS 240

Query: 745  VHFEGDTSVDHYDDQEEF----------SSSHSKVLTDAVVKLSQKVQKQAISEGN---G 885
            VH EGDT++DHYD+ ++           + + +K LTD V++LS+K+QKQ IS  +    
Sbjct: 241  VHAEGDTNMDHYDEHDDMAFQTHKPLLPADTETKDLTDPVIELSKKMQKQEISTADTIKQ 300

Query: 886  STGAEAKQNKCSTCDAVIGDAKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGD 1065
              G E K  KCSTC+  +G+AK+YR+H KS+WHKHNLKRKTR+LPPL+AEECM+++++ D
Sbjct: 301  EGGEEKKGTKCSTCNTFVGEAKEYREHCKSDWHKHNLKRKTRKLPPLSAEECMSEIDMDD 360

Query: 1066 VKNDLKEYSF 1095
             + DLK+YSF
Sbjct: 361  SRADLKDYSF 370