BLASTX nr result

ID: Coptis23_contig00002688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002688
         (1595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|2...   600   e-169
gb|ABK94679.1| unknown [Populus trichocarpa]                          597   e-168
ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...   597   e-168
ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   586   e-165
ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   585   e-165

>ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|222843569|gb|EEE81116.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  600 bits (1548), Expect = e-169
 Identities = 294/365 (80%), Positives = 326/365 (89%)
 Frame = -3

Query: 1458 YGIDRPRHVSSLANRGVGHLVRKGTGGRSSVSGIVAAVFGATGFLGRYVVQQLAKTGSQV 1279
            YG D PRH SSLA +GVGHL+RKGTGGRSSVSGIVA VFGATGFLGRYVVQQLAK GSQV
Sbjct: 33   YGADHPRHASSLAAKGVGHLIRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQV 92

Query: 1278 LVPFRGSEDSPRHLKLMGDLGQIVPMKYNPRDEDSVKAVMAKANVVLNLIGREHETRNYS 1099
            LVPFRGSEDS RHLKLMGDLGQIVPMKYNPRDE+S+KAVMAKANVV+NLIGR+HETRNYS
Sbjct: 93   LVPFRGSEDSHRHLKLMGDLGQIVPMKYNPRDENSIKAVMAKANVVINLIGRDHETRNYS 152

Query: 1098 FEEVNHSMAANLAMIAKEHGGIMRFVQVSCLGANPSSPSRMLRAKAAAEETIMKELPEAT 919
            FEE+NH M   LAMI+KEHGGIMRF+QVSCLGA+ SSPSRMLRAKAA EE +++E+PEAT
Sbjct: 153  FEELNHGMTEQLAMISKEHGGIMRFIQVSCLGASASSPSRMLRAKAAGEEAVLREMPEAT 212

Query: 918  IMKPAVMIGTEDRILNKWAHATKKWSFLPLIGGGSTKIQPVYVIDVXXXXXXALKDDGTS 739
            +MKPAVMIGTEDRILN+WAH  KK+SFLPLIG GSTKIQPVYV+DV      ALKDDG+S
Sbjct: 213  VMKPAVMIGTEDRILNRWAHFAKKYSFLPLIGDGSTKIQPVYVVDVAAAIIAALKDDGSS 272

Query: 738  MGKVYELGGPEVYTVRKLADLMHETIRERPRYLKVPVPIAKVLSSPREFLLNKVPFPLPT 559
            MGKVYELGGPE++TV +LADLMH+ IRE PRY+KVP PIAK L++PR  L+NKVPFPLP 
Sbjct: 273  MGKVYELGGPEIFTVHELADLMHDVIREWPRYVKVPFPIAKALATPRAVLINKVPFPLPA 332

Query: 558  PEIFNLDEINAYTVDTVVSENALTFENLGITPRTLKGYPIEFLFSYRKDGPQFGSTFSER 379
            P+IFNLDEINA T+D+VVSENALTF +LGI P  LKGYPIEFL SYRK GPQFGST SER
Sbjct: 333  PKIFNLDEINALTIDSVVSENALTFNDLGIVPHKLKGYPIEFLISYRKGGPQFGSTISER 392

Query: 378  VSPES 364
            VSP+S
Sbjct: 393  VSPDS 397


>gb|ABK94679.1| unknown [Populus trichocarpa]
          Length = 399

 Score =  597 bits (1539), Expect = e-168
 Identities = 293/365 (80%), Positives = 325/365 (89%)
 Frame = -3

Query: 1458 YGIDRPRHVSSLANRGVGHLVRKGTGGRSSVSGIVAAVFGATGFLGRYVVQQLAKTGSQV 1279
            YG D PRH SSLA +GV HL+RKGTGGRSSVSGIVA VFGATGFLGRYVVQQLAK GSQV
Sbjct: 33   YGADHPRHASSLAAKGVCHLIRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQV 92

Query: 1278 LVPFRGSEDSPRHLKLMGDLGQIVPMKYNPRDEDSVKAVMAKANVVLNLIGREHETRNYS 1099
            LVPFRGSEDS RHLKLMGDLGQIVPMKYNPRDE+S+KAVMAKANVV+NLIGR+HETRNYS
Sbjct: 93   LVPFRGSEDSHRHLKLMGDLGQIVPMKYNPRDENSIKAVMAKANVVINLIGRDHETRNYS 152

Query: 1098 FEEVNHSMAANLAMIAKEHGGIMRFVQVSCLGANPSSPSRMLRAKAAAEETIMKELPEAT 919
            FEE+NH M   LAMI+KEHGGIMRF+QVSCLGA+ SSPSRMLRAKAA EE +++E+PEAT
Sbjct: 153  FEELNHGMTEQLAMISKEHGGIMRFIQVSCLGASASSPSRMLRAKAAGEEAVLREMPEAT 212

Query: 918  IMKPAVMIGTEDRILNKWAHATKKWSFLPLIGGGSTKIQPVYVIDVXXXXXXALKDDGTS 739
            +MKPAVMIGTEDRILN+WAH  KK+SFLPLIG GSTKIQPVYV+DV      ALKDDG+S
Sbjct: 213  VMKPAVMIGTEDRILNRWAHFAKKYSFLPLIGDGSTKIQPVYVVDVAAAIIAALKDDGSS 272

Query: 738  MGKVYELGGPEVYTVRKLADLMHETIRERPRYLKVPVPIAKVLSSPREFLLNKVPFPLPT 559
            MGKVYELGGPE++TV +LADLMH+ IRE PRY+KVP PIAK L++PR  L+NKVPFPLP 
Sbjct: 273  MGKVYELGGPEIFTVHELADLMHDVIREWPRYVKVPFPIAKALATPRAVLINKVPFPLPA 332

Query: 558  PEIFNLDEINAYTVDTVVSENALTFENLGITPRTLKGYPIEFLFSYRKDGPQFGSTFSER 379
            P+IFNLDEINA T+D+VVSENALTF +LGI P  LKGYPIEFL SYRK GPQFGST SER
Sbjct: 333  PKIFNLDEINALTIDSVVSENALTFNDLGIVPHKLKGYPIEFLISYRKGGPQFGSTISER 392

Query: 378  VSPES 364
            VSP+S
Sbjct: 393  VSPDS 397


>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  597 bits (1538), Expect = e-168
 Identities = 289/365 (79%), Positives = 329/365 (90%)
 Frame = -3

Query: 1458 YGIDRPRHVSSLANRGVGHLVRKGTGGRSSVSGIVAAVFGATGFLGRYVVQQLAKTGSQV 1279
            YG D PR+ S+LA RGVGHL+RKGTGGRSSVSGIVA VFGATGFLGRYVVQQLAK GSQV
Sbjct: 28   YGADHPRYGSTLATRGVGHLIRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQV 87

Query: 1278 LVPFRGSEDSPRHLKLMGDLGQIVPMKYNPRDEDSVKAVMAKANVVLNLIGREHETRNYS 1099
            LVPFRGS+D PRHLKLMGDLGQIVPMKYNPRDE+S+KAVMAKANVV+NLIGR++ETRNYS
Sbjct: 88   LVPFRGSDDDPRHLKLMGDLGQIVPMKYNPRDENSIKAVMAKANVVINLIGRDYETRNYS 147

Query: 1098 FEEVNHSMAANLAMIAKEHGGIMRFVQVSCLGANPSSPSRMLRAKAAAEETIMKELPEAT 919
            FEE+NH+MA  LAMI+KEHGGIMRF+QVSCLGA+ SSPSR+LRAKAA EE +++E+PEAT
Sbjct: 148  FEELNHAMAGQLAMISKEHGGIMRFIQVSCLGASASSPSRLLRAKAAGEEAVLREMPEAT 207

Query: 918  IMKPAVMIGTEDRILNKWAHATKKWSFLPLIGGGSTKIQPVYVIDVXXXXXXALKDDGTS 739
            +MKPAVMIGTEDRILN+WAH TKK+SFLPLIG GSTKIQPVYV+D+      ALKDDGTS
Sbjct: 208  VMKPAVMIGTEDRILNRWAHFTKKYSFLPLIGDGSTKIQPVYVVDIAAAIIAALKDDGTS 267

Query: 738  MGKVYELGGPEVYTVRKLADLMHETIRERPRYLKVPVPIAKVLSSPREFLLNKVPFPLPT 559
            MGKVYELGGPE++TV +LA+LM++ IRE PRY+KVP PIAK  ++PRE LLNKVPFPLP 
Sbjct: 268  MGKVYELGGPEIFTVHELAELMYDVIREWPRYVKVPFPIAKAFATPREILLNKVPFPLPN 327

Query: 558  PEIFNLDEINAYTVDTVVSENALTFENLGITPRTLKGYPIEFLFSYRKDGPQFGSTFSER 379
            P++FNLDEIN+ T+DTVVSENALTF +LGI P  LKGYP+EFL SYRK GPQFGST SER
Sbjct: 328  PKMFNLDEINSLTMDTVVSENALTFSDLGIVPHKLKGYPVEFLISYRKGGPQFGSTISER 387

Query: 378  VSPES 364
            VSP+S
Sbjct: 388  VSPDS 392


>ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
            9, mitochondrial-like [Glycine max]
          Length = 396

 Score =  586 bits (1511), Expect = e-165
 Identities = 289/365 (79%), Positives = 322/365 (88%)
 Frame = -3

Query: 1458 YGIDRPRHVSSLANRGVGHLVRKGTGGRSSVSGIVAAVFGATGFLGRYVVQQLAKTGSQV 1279
            YG+D  R+VS+LA +GVGHLVRKGTGGRSSVSGI+A VFGATGFLGRYVVQQLAK GSQV
Sbjct: 30   YGMDHERYVSTLATKGVGHLVRKGTGGRSSVSGIIATVFGATGFLGRYVVQQLAKMGSQV 89

Query: 1278 LVPFRGSEDSPRHLKLMGDLGQIVPMKYNPRDEDSVKAVMAKANVVLNLIGREHETRNYS 1099
            LVPFRGSED+PRHLKLMGDLGQIVPMKYNPRDE SVKAVMAKANVV+NLIGR++ETRNYS
Sbjct: 90   LVPFRGSEDNPRHLKLMGDLGQIVPMKYNPRDESSVKAVMAKANVVINLIGRDYETRNYS 149

Query: 1098 FEEVNHSMAANLAMIAKEHGGIMRFVQVSCLGANPSSPSRMLRAKAAAEETIMKELPEAT 919
            FEEV++ MA  LA I+KEHGGI+RF+QVSCLGA+PSSPSRMLR K+AAEE I++ELPEAT
Sbjct: 150  FEEVHYHMAEQLAKISKEHGGILRFIQVSCLGASPSSPSRMLRTKSAAEEMILRELPEAT 209

Query: 918  IMKPAVMIGTEDRILNKWAHATKKWSFLPLIGGGSTKIQPVYVIDVXXXXXXALKDDGTS 739
            I+KPAVMIGTEDRILN WAH  KK+ FLPL G GSTKIQPVYVIDV       LKDDGTS
Sbjct: 210  ILKPAVMIGTEDRILNPWAHFAKKYGFLPLFGDGSTKIQPVYVIDVAAALTSLLKDDGTS 269

Query: 738  MGKVYELGGPEVYTVRKLADLMHETIRERPRYLKVPVPIAKVLSSPREFLLNKVPFPLPT 559
            MGK+YELGGPE++TV +LAD+M +TIRE PRY+KVP PIAK L++PRE LLNKVPFPLP 
Sbjct: 270  MGKIYELGGPEIFTVHELADVMFDTIREWPRYVKVPFPIAKALATPREILLNKVPFPLPV 329

Query: 558  PEIFNLDEINAYTVDTVVSENALTFENLGITPRTLKGYPIEFLFSYRKDGPQFGSTFSER 379
            PEI NLD+I A T DTVVSENALTF +LGI P  LKGYPIEFL SYRK GPQFGST SER
Sbjct: 330  PEILNLDKIQALTTDTVVSENALTFNDLGIVPHKLKGYPIEFLISYRKGGPQFGSTISER 389

Query: 378  VSPES 364
            V+P+S
Sbjct: 390  VTPDS 394


>ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
            9, mitochondrial [Vitis vinifera]
            gi|297744229|emb|CBI37199.3| unnamed protein product
            [Vitis vinifera]
          Length = 399

 Score =  585 bits (1509), Expect = e-165
 Identities = 293/365 (80%), Positives = 322/365 (88%)
 Frame = -3

Query: 1458 YGIDRPRHVSSLANRGVGHLVRKGTGGRSSVSGIVAAVFGATGFLGRYVVQQLAKTGSQV 1279
            YG D PR  S+LA +GVGHLVRKGTGGRSSVSGIVA VFGATGFLGRYVVQQLAK GSQV
Sbjct: 33   YGADHPRLGSTLAPKGVGHLVRKGTGGRSSVSGIVAVVFGATGFLGRYVVQQLAKMGSQV 92

Query: 1278 LVPFRGSEDSPRHLKLMGDLGQIVPMKYNPRDEDSVKAVMAKANVVLNLIGREHETRNYS 1099
            LVPFRGSEDS RHLKLMGDLGQIVPMKYNPRDE+S+KAVMAKANVVLNLIGRE+ETRNYS
Sbjct: 93   LVPFRGSEDSHRHLKLMGDLGQIVPMKYNPRDENSIKAVMAKANVVLNLIGREYETRNYS 152

Query: 1098 FEEVNHSMAANLAMIAKEHGGIMRFVQVSCLGANPSSPSRMLRAKAAAEETIMKELPEAT 919
            FEEVNH MA  LAMI+KEHGGIMRF+QVSCLGA+PSSPSRML AKAAAEE +++ELPEAT
Sbjct: 153  FEEVNHHMAEQLAMISKEHGGIMRFIQVSCLGASPSSPSRMLMAKAAAEEAVLRELPEAT 212

Query: 918  IMKPAVMIGTEDRILNKWAHATKKWSFLPLIGGGSTKIQPVYVIDVXXXXXXALKDDGTS 739
            IM+PAVMIGTEDRILN+WA   KK+ FLPL G GSTK QPVYVIDV      ALKDDGTS
Sbjct: 213  IMRPAVMIGTEDRILNRWAQFAKKYGFLPLYGDGSTKFQPVYVIDVAAAIMAALKDDGTS 272

Query: 738  MGKVYELGGPEVYTVRKLADLMHETIRERPRYLKVPVPIAKVLSSPREFLLNKVPFPLPT 559
            MGKVYELGGPE++T+ +LA +M++TIRE PRY+KVP PIAK ++ PRE LLNKVPFPLPT
Sbjct: 273  MGKVYELGGPEIFTMHELAAVMYDTIREWPRYVKVPFPIAKAMTLPREILLNKVPFPLPT 332

Query: 558  PEIFNLDEINAYTVDTVVSENALTFENLGITPRTLKGYPIEFLFSYRKDGPQFGSTFSER 379
            P +FNLD INA+T DTVVSENALTF++LGI P  LKGYPIEFL SYRK GPQFGST SER
Sbjct: 333  PGLFNLDLINAFTSDTVVSENALTFDDLGIVPHKLKGYPIEFLLSYRKGGPQFGSTISER 392

Query: 378  VSPES 364
            V PE+
Sbjct: 393  VDPEA 397


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