BLASTX nr result

ID: Coptis23_contig00002668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002668
         (1583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273425.1| PREDICTED: mRNA-decapping enzyme-like protei...   417   e-114
ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protei...   412   e-112
ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_003540254.1| PREDICTED: mRNA-decapping enzyme-like protei...   397   e-108
ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycin...   394   e-107

>ref|XP_002273425.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
            gi|296084878|emb|CBI28287.3| unnamed protein product
            [Vitis vinifera]
          Length = 369

 Score =  417 bits (1071), Expect = e-114
 Identities = 228/369 (61%), Positives = 257/369 (69%), Gaps = 4/369 (1%)
 Frame = +3

Query: 234  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 413
            GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 414  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 593
            VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 594  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAIANVPD 773
            +VANLF+RILNAY              EFEELEAVPTMAVM+GPLEP+SSTSS +A+VPD
Sbjct: 125  EVANLFTRILNAYSKVPPKTKVSSTKSEFEELEAVPTMAVMDGPLEPSSSTSSNVADVPD 184

Query: 774  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAVPLPSHAPSVLPSPVSSHQNPSPLPVSS 953
            D  FVNFFS A+ IGN S+  + GQ     A  PLPS  P+ +P  V + Q  SP   +S
Sbjct: 185  DPSFVNFFSEAVTIGNASSVAVTGQPYQSSATPPLPSCPPNAIPGTVPTLQLASPPQSTS 244

Query: 954  TPRMPLLDI--PDLSSNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXXXX 1127
            T  +PLLD   P  +SN   NLVK             +M   +S+  T            
Sbjct: 245  TSLIPLLDTSQPISTSNRTTNLVKPSSFFGPPSSSPLMMPPLSSAMPT-----APPLHPP 299

Query: 1128 VNLQRPYG--XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFIDMF 1301
            V LQRPYG                        NYGPVI++DKVREAL+ ++Q ++FIDM 
Sbjct: 300  VTLQRPYGAPMLQPFPPPTPPPSLTPTSMPAPNYGPVITRDKVREALLMLVQDNQFIDMV 359

Query: 1302 YQELLNAHY 1328
            ++ LLNAH+
Sbjct: 360  HRALLNAHH 368


>ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
            gi|297740156|emb|CBI30338.3| unnamed protein product
            [Vitis vinifera]
          Length = 370

 Score =  412 bits (1058), Expect = e-112
 Identities = 231/368 (62%), Positives = 258/368 (70%), Gaps = 6/368 (1%)
 Frame = +3

Query: 231  TGKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLF 410
            TGKLMPNLDQ STK+LNLTVLQR+DPF+EEILITAAHVTFYEFNI+LNQWSRKDVEGSLF
Sbjct: 4    TGKLMPNLDQHSTKLLNLTVLQRMDPFIEEILITAAHVTFYEFNIELNQWSRKDVEGSLF 63

Query: 411  VVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPREC 590
            VVKRN+QPRFQFIVMNRRNTDNLVENLLGDFEY+VQVPYLLYRNAAQEVNGIWFYN REC
Sbjct: 64   VVKRNSQPRFQFIVMNRRNTDNLVENLLGDFEYDVQVPYLLYRNAAQEVNGIWFYNSREC 123

Query: 591  EDVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAIANVP 770
            E+VANLFSRILNAY              EFEELEAVPTMAVMEG LEP SST+SA  + P
Sbjct: 124  EEVANLFSRILNAYSKVPPKPKLSSSKSEFEELEAVPTMAVMEGMLEP-SSTASATTDAP 182

Query: 771  DDSPFVNFFSAAMNIG-NTSNAVIPGQHQHPPAAVPLPSHAPSVLPSPVSSHQNPS-PLP 944
            +DS FVNFF AAMNIG NTSN    GQ   P   VP  SHAPSV+PSPV + Q PS P  
Sbjct: 183  EDSTFVNFFGAAMNIGSNTSNVANSGQSYQPSITVPSFSHAPSVVPSPVPTLQVPSLPRS 242

Query: 945  VSSTPRMPLLDIPD--LSSNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXX 1118
             SSTP +P+ + PD   SSN A NLVK             L++    SSM          
Sbjct: 243  ASSTPPLPIHETPDPISSSNLATNLVKPSSFFAPPSSSSALIMPPMPSSM-----PTAGL 297

Query: 1119 XXXVNLQRPYG--XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFI 1292
               +NLQRPYG                        NYGPVI++DKVR+AL+ + Q ++FI
Sbjct: 298  HPPLNLQRPYGAPMLQPFPPPAPPASLTPTSSPSPNYGPVINRDKVRDALLLLAQDNQFI 357

Query: 1293 DMFYQELL 1316
            D+ +Q LL
Sbjct: 358  DLVHQALL 365


>ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|222850015|gb|EEE87562.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  401 bits (1030), Expect = e-109
 Identities = 224/371 (60%), Positives = 253/371 (68%), Gaps = 6/371 (1%)
 Frame = +3

Query: 234  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 413
            GKLMPN+DQQSTK+LNLTVLQRIDP VEEILITAAHVT Y+FNIDL QWSRKDVEGSLFV
Sbjct: 5    GKLMPNIDQQSTKLLNLTVLQRIDPLVEEILITAAHVTLYQFNIDLTQWSRKDVEGSLFV 64

Query: 414  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 593
            VKRN QPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNMQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 594  DVANLFSRILNAY--XXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAIANV 767
            +VANLFSRILNAY                EFEELEAVPTMAVM+GPLEP+S+++S +++V
Sbjct: 125  EVANLFSRILNAYSKVPQKPKVSLSTTKSEFEELEAVPTMAVMDGPLEPSSASASVVSDV 184

Query: 768  PDDSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAVPLPSHAPSVLPSPVSSHQNPSPLPV 947
            PDD  FVNFFS AM IGN S A + GQ       +PL S   SV  S + + Q PS    
Sbjct: 185  PDDPAFVNFFSTAMTIGNASAAAVAGQSYQSSIPIPLHSQLTSVASSTMPTLQIPSTPLS 244

Query: 948  SSTPRMPLLDIPDLSS--NHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXX 1121
            +S P MPLLD+ D+SS  N  ANLVK              M+   SSSM           
Sbjct: 245  ASIPLMPLLDVSDVSSSNNRTANLVKPSFFVPPSSTR---MMPPVSSSM----PTAPPLN 297

Query: 1122 XXVNLQRPYG--XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFID 1295
               +L RPYG                        N+GPVISKDKVR+AL+ ++Q D+FID
Sbjct: 298  PPTSLHRPYGAPLLQPFPPPTPPPSLTPASVPSPNHGPVISKDKVRDALLALVQDDQFID 357

Query: 1296 MFYQELLNAHY 1328
            M Y+ LLNAH+
Sbjct: 358  MVYRTLLNAHH 368


>ref|XP_003540254.1| PREDICTED: mRNA-decapping enzyme-like protein-like [Glycine max]
          Length = 366

 Score =  397 bits (1020), Expect = e-108
 Identities = 225/368 (61%), Positives = 255/368 (69%), Gaps = 4/368 (1%)
 Frame = +3

Query: 234  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 413
            GKLMPNLDQ STK+LNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 414  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 593
            VKRNTQPRFQFIVMNRRNT+NLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTENLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 594  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAIANVPD 773
            +VANLFSRILNAY              EFEELEAVPTMAV++GPLEP+SST+S +A+VPD
Sbjct: 125  EVANLFSRILNAYAKVPPKSKVSSTKSEFEELEAVPTMAVIDGPLEPSSSTTSNVADVPD 184

Query: 774  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAVPLPSHAPSVLPSPVSSHQNPSPLPVSS 953
            D  FVNFFSAAM IGNTSNA I GQ     A +   S   +     V + Q P+    +S
Sbjct: 185  DPSFVNFFSAAMAIGNTSNAPINGQPCQSSATISSSSVPTNAATPTVPTLQIPT--LSAS 242

Query: 954  TPRMPLLDIPDL--SSNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXXXX 1127
            TP +P LD  +L  SSN  A LVK             +M+   SSS              
Sbjct: 243  TPLIPQLDAAELISSSNRTAKLVK--PSFFVPPPSSAMMIPPVSSS----TPSAPPLHPA 296

Query: 1128 VNLQRPYG--XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFIDMF 1301
            VN+QRPYG                        +YGPVIS++KVR+AL+ ++Q ++FIDM 
Sbjct: 297  VNVQRPYGAPLLQPFPPPNPPPSLAPAPSPSPSYGPVISREKVRDALLVLVQDNQFIDMV 356

Query: 1302 YQELLNAH 1325
            Y+ LLNAH
Sbjct: 357  YRALLNAH 364


>ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycine max]
            gi|255636473|gb|ACU18575.1| unknown [Glycine max]
            gi|255641041|gb|ACU20800.1| unknown [Glycine max]
          Length = 368

 Score =  394 bits (1012), Expect = e-107
 Identities = 225/370 (60%), Positives = 250/370 (67%), Gaps = 6/370 (1%)
 Frame = +3

Query: 234  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 413
            GKLMPNLDQ STK+LNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 414  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 593
            VKRNTQPRFQFIVMNRRNT+NLVENLLGDFEYEVQ+PYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTENLVENLLGDFEYEVQIPYLLYRNAAQEVNGIWFYNARECE 124

Query: 594  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAIANVPD 773
            +VANLFSRILNAY              EFEELEAVPTMAVM+GPLEP+SST+S +A+VPD
Sbjct: 125  EVANLFSRILNAYAKVPPKSKVSSTKSEFEELEAVPTMAVMDGPLEPSSSTTSNVADVPD 184

Query: 774  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAVPLPSHAPSVLPSPVSSHQNPSPLPVSS 953
            D  FVNFFSAAM IGNTSN  I GQ     AA+   S         V + Q PS     S
Sbjct: 185  DPSFVNFFSAAMAIGNTSNTPITGQPYQSSAAISSSSVPTHTATPTVPTLQIPS--LSQS 242

Query: 954  TPRMPLLDIPD--LSSNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXXXX 1127
            TP +P LD  +   SSN  A LVK             +M+   SSS              
Sbjct: 243  TPLIPPLDAVESICSSNRTAKLVK--PSFFVPPPSSAMMIPPVSSS----TPTAPPLHPA 296

Query: 1128 VNLQRPYG----XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFID 1295
            VN+ RPYG                          NYG VIS++KVR+ALM ++Q ++FID
Sbjct: 297  VNVHRPYGAPLLQPFPPPNPPLSLAPAASPSSSPNYGSVISREKVRDALMVLVQDNQFID 356

Query: 1296 MFYQELLNAH 1325
            M Y+ LLNAH
Sbjct: 357  MVYRALLNAH 366


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