BLASTX nr result

ID: Coptis23_contig00002665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002665
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633018.1| PREDICTED: uncharacterized protein LOC100253...    81   8e-14
emb|CBI30733.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|NP_001241642.1| uncharacterized protein LOC100781567 precurs...    69   5e-10
ref|XP_002893581.1| hypothetical protein ARALYDRAFT_473182 [Arab...    67   1e-09
gb|ABK28019.1| unknown [Arabidopsis thaliana]                          67   1e-09

>ref|XP_003633018.1| PREDICTED: uncharacterized protein LOC100253271 [Vitis vinifera]
          Length = 100

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = -2

Query: 283 RSLFAIQRNNINKLVDCTEMISRSQCLQQKSKCRWCTSDAINDMCFSTSEAWRLPQQVFF 104
           RSL   ++N+  ++ DC EM S SQC  Q SKCRWC SDA++DMCFS +EAWRLPQQV F
Sbjct: 41  RSLSGARKNS--QIPDCNEMASNSQC-SQNSKCRWCRSDALDDMCFSKAEAWRLPQQV-F 96

Query: 103 SCD 95
           SCD
Sbjct: 97  SCD 99


>emb|CBI30733.3| unnamed protein product [Vitis vinifera]
          Length = 95

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -2

Query: 283 RSLFAIQRNNINKLVDCTEMISRSQCLQQKSKCRWCTSDAINDMCFSTSEAWRLPQQ 113
           RSL   ++N+  ++ DC EM S SQC  Q SKCRWC SDA++DMCFS +EAWRLPQQ
Sbjct: 41  RSLSGARKNS--QIPDCNEMASNSQC-SQNSKCRWCRSDALDDMCFSKAEAWRLPQQ 94


>ref|NP_001241642.1| uncharacterized protein LOC100781567 precursor [Glycine max]
           gi|255633968|gb|ACU17346.1| unknown [Glycine max]
          Length = 105

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = -2

Query: 289 SDRSLFAIQRNNINKLVDCTEMISRSQCLQQKSKCRWCTSDAINDMCFSTSEAWRLPQQV 110
           S R LF  +  N      C E+++ SQC  Q SKC WCTS+ ++DMCF+ SEAWRLPQQV
Sbjct: 42  STRHLF--ESRNTKHPNKCGELVALSQC-SQNSKCSWCTSEVLDDMCFTKSEAWRLPQQV 98

Query: 109 FFSCDQI 89
            +SC  I
Sbjct: 99  -YSCSLI 104


>ref|XP_002893581.1| hypothetical protein ARALYDRAFT_473182 [Arabidopsis lyrata subsp.
           lyrata] gi|297339423|gb|EFH69840.1| hypothetical protein
           ARALYDRAFT_473182 [Arabidopsis lyrata subsp. lyrata]
          Length = 104

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
 Frame = -2

Query: 313 TPTSYYTISDRSLFAIQRN----NINKLVDCTEMISRSQCLQQKSKCRWCTSDAINDMCF 146
           +P S   + DR L  IQ+N      N+ + C EM +RSQC     +CRWC S+A++D+CF
Sbjct: 29  SPESEVHVLDRELLEIQKNPKPVKTNRKLKCCEMRTRSQC-SAFPRCRWCRSEALDDLCF 87

Query: 145 STSEAWRLPQQVF 107
           S +EA RLP QVF
Sbjct: 88  SKAEALRLPSQVF 100


>gb|ABK28019.1| unknown [Arabidopsis thaliana]
          Length = 105

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = -2

Query: 313 TPTSYYTISDRSLFAIQRN----NINKLVDCTEMISRSQCLQQKSKCRWCTSDAINDMCF 146
           +P S   + DR L  IQ N      N+ + C EM SRSQC     +CRWC S+A++D+CF
Sbjct: 29  SPESEVHVLDRELLEIQTNPKPGKTNRKLKCCEMRSRSQC-SAFPRCRWCRSEALDDLCF 87

Query: 145 STSEAWRLPQQVF 107
           S +EA RLP QVF
Sbjct: 88  SKAEALRLPSQVF 100


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