BLASTX nr result

ID: Coptis23_contig00002646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002646
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141508.1| PREDICTED: uncharacterized protein LOC101215...   329   1e-87
ref|XP_002520894.1| conserved hypothetical protein [Ricinus comm...   325   1e-86
ref|XP_002270952.1| PREDICTED: uncharacterized protein LOC100265...   325   2e-86
ref|XP_004167240.1| PREDICTED: uncharacterized protein LOC101225...   323   9e-86
ref|XP_002881741.1| hypothetical protein ARALYDRAFT_903376 [Arab...   322   2e-85

>ref|XP_004141508.1| PREDICTED: uncharacterized protein LOC101215996 [Cucumis sativus]
          Length = 377

 Score =  329 bits (843), Expect = 1e-87
 Identities = 170/268 (63%), Positives = 201/268 (75%), Gaps = 12/268 (4%)
 Frame = +1

Query: 64  FSSKTSPGPDSKTSLSLKLLNAFPSSRFN------------LNPNLTRTVVDKPLSAVRS 207
           +S K + G    +SL  KL     +SRF             +N N  + V+DKP +AV S
Sbjct: 73  YSPKLTAG---NSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVIDKPAAAVSS 129

Query: 208 VFSRYREAVGLQIDAFWKRNYLILXXXXXXXXCMLLWRLMFGIANTFVGLSEGMAKYGFL 387
            FSRYREA+GLQI+AF+KRNYL+L        C LLW++MFGIANTFVGLSEGMAKYGFL
Sbjct: 130 AFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLSEGMAKYGFL 189

Query: 388 ALSSAIVAFAGLYIRSRFTINPDRVYRIAMRKLNTSAAILEVMGAPLSGTDVRAYVMSGG 567
           ALSSAIVAF GLY+RSRFT+NPDRVYR+AMRKLNTSA ILEVMGAPL+G+D+RAYVMSGG
Sbjct: 190 ALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG 249

Query: 568 GISLRNFKLKLGGKRCFLIFPIQGSERXXXXXXXXXXXXXQYDMKLLAIDVPMIAGPDQR 747
           G +L+NF      KRCFLIFPI+GSER             QYDMKLLA+D+PM +GPDQR
Sbjct: 250 GFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQR 309

Query: 748 FFLIGDEDEYKVGGGLISELRDPIVRAM 831
            FLIG+E+EYK+GGGLISELRDP+V+AM
Sbjct: 310 LFLIGNEEEYKIGGGLISELRDPVVKAM 337


>ref|XP_002520894.1| conserved hypothetical protein [Ricinus communis]
           gi|223540025|gb|EEF41603.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score =  325 bits (834), Expect = 1e-86
 Identities = 164/227 (72%), Positives = 187/227 (82%)
 Frame = +1

Query: 151 LNPNLTRTVVDKPLSAVRSVFSRYREAVGLQIDAFWKRNYLILXXXXXXXXCMLLWRLMF 330
           +N +  R V++KP +     FSRYREA+GLQIDAF KRN L+L        C LLWR+MF
Sbjct: 101 VNGDFARKVLEKPATT----FSRYREAIGLQIDAFCKRNVLLLVGAGGVIVCALLWRIMF 156

Query: 331 GIANTFVGLSEGMAKYGFLALSSAIVAFAGLYIRSRFTINPDRVYRIAMRKLNTSAAILE 510
           GIANTFVGLSEGMAKYGFLALSSAIVAFAGLYIRSR T+NPDRVYRIAMRKLNTSAAILE
Sbjct: 157 GIANTFVGLSEGMAKYGFLALSSAIVAFAGLYIRSRITVNPDRVYRIAMRKLNTSAAILE 216

Query: 511 VMGAPLSGTDVRAYVMSGGGISLRNFKLKLGGKRCFLIFPIQGSERXXXXXXXXXXXXXQ 690
           VMGAPL+GT++RAYVMSGGG++L+NFK +L  KRCFLIFPI+GSER             Q
Sbjct: 217 VMGAPLTGTELRAYVMSGGGVTLKNFKPRLRSKRCFLIFPIRGSERKGLVSVEVKKKKGQ 276

Query: 691 YDMKLLAIDVPMIAGPDQRFFLIGDEDEYKVGGGLISELRDPIVRAM 831
           YDMKLLA+D+PM +GPDQR FLIGDEDEYKVGGGLI+ELRDP+V+AM
Sbjct: 277 YDMKLLAVDIPMASGPDQRLFLIGDEDEYKVGGGLIAELRDPVVKAM 323


>ref|XP_002270952.1| PREDICTED: uncharacterized protein LOC100265611 [Vitis vinifera]
          Length = 382

 Score =  325 bits (833), Expect = 2e-86
 Identities = 165/242 (68%), Positives = 188/242 (77%), Gaps = 5/242 (2%)
 Frame = +1

Query: 121 LNAFPSSRFNL-----NPNLTRTVVDKPLSAVRSVFSRYREAVGLQIDAFWKRNYLILXX 285
           L  F S  +NL     N N  +  +D PL ++RS F RYREAVGLQI+AFWKRNY+ L  
Sbjct: 99  LRYFSSGGWNLGKAQTNANFPKAFLDLPLRSLRSAFYRYREAVGLQIEAFWKRNYVFLLG 158

Query: 286 XXXXXXCMLLWRLMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYIRSRFTINPDRVY 465
                 C +LWR MFGIA TFVGLSEGMAKYGFLALS++IVAF+GLYIRSR TINPD+VY
Sbjct: 159 AGGVVLCAVLWRAMFGIATTFVGLSEGMAKYGFLALSASIVAFSGLYIRSRLTINPDKVY 218

Query: 466 RIAMRKLNTSAAILEVMGAPLSGTDVRAYVMSGGGISLRNFKLKLGGKRCFLIFPIQGSE 645
           RIAMRKLNTSA ILEVMGAPL+GTD+RAYVMSGGG+SL+ FK  L  KRCFLIFPI+GSE
Sbjct: 219 RIAMRKLNTSAGILEVMGAPLTGTDLRAYVMSGGGLSLKKFKPTLRSKRCFLIFPIRGSE 278

Query: 646 RXXXXXXXXXXXXXQYDMKLLAIDVPMIAGPDQRFFLIGDEDEYKVGGGLISELRDPIVR 825
           R             +YDMKLLA+D+PM  GPDQR FLIGDE+EYKVGGGLISELRDP+V+
Sbjct: 279 RRGLVSIEVKKKKGEYDMKLLAVDIPMATGPDQRLFLIGDEEEYKVGGGLISELRDPVVK 338

Query: 826 AM 831
           AM
Sbjct: 339 AM 340


>ref|XP_004167240.1| PREDICTED: uncharacterized protein LOC101225862 [Cucumis sativus]
          Length = 378

 Score =  323 bits (827), Expect = 9e-86
 Identities = 169/269 (62%), Positives = 201/269 (74%), Gaps = 13/269 (4%)
 Frame = +1

Query: 64  FSSKTSPGPDSKTSLSLKLLNAFPSSRFN------------LNPNLTRTVVDKPLSAVRS 207
           +S K + G    +SL  KL     +SRF             +N N  + V+DKP +AV S
Sbjct: 73  YSPKLTAG---NSSLVTKLNAHHSASRFRFFSVKIPRFGGQINGNFAKKVIDKPAAAVSS 129

Query: 208 VFSRYREAVGLQIDAFWKRNYLILXXXXXXXXCMLLWRLMFGIANTFVGLSEGMAKYGFL 387
            FSRYREA+GLQI+AF+KRNYL+L        C LLW++MFGIANTFVGLSEGMAKYGFL
Sbjct: 130 AFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLSEGMAKYGFL 189

Query: 388 ALSSAIVAFAGLYIRSRFTINPDRVYRIAMRKLNTSAAILEVMGAPLSGTDVRAYVMSGG 567
           ALSSAIVAF GLY+RSRFT+NPDRVYR+AMRKLNTSA ILEVMGAPL+G+D+RAYVMSGG
Sbjct: 190 ALSSAIVAFTGLYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG 249

Query: 568 GISLRNFKLKLGGKRCFLIFPIQGSERXXXXXXXXXXXXXQ-YDMKLLAIDVPMIAGPDQ 744
           G +L+NF      KRCFLIFPI+GSER             + YDMKLLA+D+PM +GPDQ
Sbjct: 250 GFTLKNFAPNRRSKRCFLIFPIRGSERKGLVSVEVKRRRARFYDMKLLAVDIPMASGPDQ 309

Query: 745 RFFLIGDEDEYKVGGGLISELRDPIVRAM 831
           R FLIG+E+EYK+GGGLISELRDP+V+AM
Sbjct: 310 RLFLIGNEEEYKIGGGLISELRDPVVKAM 338


>ref|XP_002881741.1| hypothetical protein ARALYDRAFT_903376 [Arabidopsis lyrata subsp.
           lyrata] gi|297327580|gb|EFH58000.1| hypothetical protein
           ARALYDRAFT_903376 [Arabidopsis lyrata subsp. lyrata]
          Length = 377

 Score =  322 bits (825), Expect = 2e-85
 Identities = 156/241 (64%), Positives = 191/241 (79%)
 Frame = +1

Query: 109 SLKLLNAFPSSRFNLNPNLTRTVVDKPLSAVRSVFSRYREAVGLQIDAFWKRNYLILXXX 288
           S +L++   S    ++ N  R VVDKP+ AV S F+RYREA+GL +DAFWK+N L++   
Sbjct: 96  SFRLVSNKSSGFRKIDGNFARKVVDKPVKAVSSTFARYREAIGLHVDAFWKKNSLVVFGA 155

Query: 289 XXXXXCMLLWRLMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYIRSRFTINPDRVYR 468
                C+ LWR+MFGIA+TFVGLSEGMAKYGFLALSSAIVAF+GLY+RSRFTINPD+VYR
Sbjct: 156 GGVFVCIFLWRIMFGIASTFVGLSEGMAKYGFLALSSAIVAFSGLYLRSRFTINPDKVYR 215

Query: 469 IAMRKLNTSAAILEVMGAPLSGTDVRAYVMSGGGISLRNFKLKLGGKRCFLIFPIQGSER 648
           + MRK+NT+A ILEVMGAPLSG+D+RAYVMSGGGI+ + FK  +  KRCFL+FP+QGSER
Sbjct: 216 MTMRKINTAAEILEVMGAPLSGSDLRAYVMSGGGITFKKFKPTIRSKRCFLLFPVQGSER 275

Query: 649 XXXXXXXXXXXXXQYDMKLLAIDVPMIAGPDQRFFLIGDEDEYKVGGGLISELRDPIVRA 828
                        QYDMKLLA+D+PM +GPDQR FLIGDE+EY+VGGGLIS LRDP+V+A
Sbjct: 276 KGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFLIGDEEEYRVGGGLISVLRDPVVKA 335

Query: 829 M 831
           M
Sbjct: 336 M 336


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