BLASTX nr result

ID: Coptis23_contig00002640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002640
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258...   382   e-104
ref|XP_002531808.1| conserved hypothetical protein [Ricinus comm...   371   e-100
gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK...   366   5e-99
ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209...   365   6e-99
ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|2...   362   5e-98

>ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258770 [Vitis vinifera]
          Length = 351

 Score =  382 bits (981), Expect = e-104
 Identities = 189/245 (77%), Positives = 211/245 (86%), Gaps = 6/245 (2%)
 Frame = +2

Query: 17  GIIGIILAGWKSRVLADPQFPFKVLMEELVGVTACLIGDMASRPNFGLNELDFVFSTLVV 196
           G++G+ L GW+SRV ADPQFPFKVLMEELVGVTAC+IGDMASRPNFGLNELDFVFSTLVV
Sbjct: 96  GVLGLFLNGWRSRVSADPQFPFKVLMEELVGVTACVIGDMASRPNFGLNELDFVFSTLVV 155

Query: 197 GSIMNFVLMYLLAPTMAASSSNLPAIFASCPTSHMFEPGAFGPLHRFGTFVYKGLVFACV 376
           GSIMNFVLMYLLAPT ++ + NLPAIFA CP  HMFE G++G L+RFGTFVYKG++FA V
Sbjct: 156 GSIMNFVLMYLLAPTASSVTPNLPAIFAGCPPGHMFESGSYGVLNRFGTFVYKGVLFATV 215

Query: 377 GFAAGLVGTAISNALIVLRKKMDPNFQTPNKPPPTILNALTWSAHMGFSSNFRYQTLNGI 556
           GFAAGLVGTAISN LI +RKKMDPNF TPNKPPPT+LNA+TW+ HMG SSNFRYQTLNGI
Sbjct: 216 GFAAGLVGTAISNGLISMRKKMDPNFVTPNKPPPTVLNAITWAIHMGLSSNFRYQTLNGI 275

Query: 557 EFLLAKGLPPAVFKALVVILRCFNNVLGGVSFVTLARLTGSQKVLDSGKT------DSEE 718
           EFLLAKGLPP  FK+ VV+LRCFNN+LGG+SFV LARLTGSQ V + GK          E
Sbjct: 276 EFLLAKGLPPLAFKSSVVVLRCFNNILGGMSFVLLARLTGSQSV-EEGKVVLAEAGSDAE 334

Query: 719 KEKLV 733
           KEKLV
Sbjct: 335 KEKLV 339


>ref|XP_002531808.1| conserved hypothetical protein [Ricinus communis]
            gi|223528542|gb|EEF30565.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 680

 Score =  371 bits (952), Expect = e-100
 Identities = 180/240 (75%), Positives = 208/240 (86%)
 Frame = +2

Query: 17   GIIGIILAGWKSRVLADPQFPFKVLMEELVGVTACLIGDMASRPNFGLNELDFVFSTLVV 196
            GI+G+ L GW+SRV ADPQFPFKVLMEELVGV+AC++GDMASRPNFGLNELDFVFSTLVV
Sbjct: 429  GILGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVV 488

Query: 197  GSIMNFVLMYLLAPTMAASSSNLPAIFASCPTSHMFEPGAFGPLHRFGTFVYKGLVFACV 376
            GSI+NF LMYLLAPT +A+S+ LPAIFA+CP SHMFEPGAF  ++R GT VYKG +FA V
Sbjct: 489  GSILNFTLMYLLAPTASAASATLPAIFANCPASHMFEPGAFTLMNRLGTAVYKGTIFAAV 548

Query: 377  GFAAGLVGTAISNALIVLRKKMDPNFQTPNKPPPTILNALTWSAHMGFSSNFRYQTLNGI 556
            GFAAGLVGTA+SN LI +RKKMDP F+TPNKPPPTILNA+TW+ HMG SSN RYQTLNG+
Sbjct: 549  GFAAGLVGTALSNGLITMRKKMDPTFETPNKPPPTILNAVTWALHMGISSNLRYQTLNGV 608

Query: 557  EFLLAKGLPPAVFKALVVILRCFNNVLGGVSFVTLARLTGSQKVLDSGKTDSEEKEKLVN 736
            EF+L KGLPP  FK+ VV+LRC NNVLGG+SFV LARLTGSQ V ++ K    EKEKL++
Sbjct: 609  EFVLEKGLPPLAFKSSVVVLRCLNNVLGGMSFVILARLTGSQSVAEA-KPVLAEKEKLLD 667


>gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK95259.1| unknown
           [Populus trichocarpa]
          Length = 357

 Score =  366 bits (939), Expect = 5e-99
 Identities = 178/246 (72%), Positives = 206/246 (83%), Gaps = 6/246 (2%)
 Frame = +2

Query: 17  GIIGIILAGWKSRVLADPQFPFKVLMEELVGVTACLIGDMASRPNFGLNELDFVFSTLVV 196
           G++G+ L GW+SRV ADPQFPFKVLMEE+VGV+AC++GDMASRPNFGL+ELDFVFSTLVV
Sbjct: 99  GVLGLFLNGWRSRVAADPQFPFKVLMEEVVGVSACVLGDMASRPNFGLDELDFVFSTLVV 158

Query: 197 GSIMNFVLMYLLAPTMAASSSNLPAIFASCPTSHMFEPGAFGPLHRFGTFVYKGLVFACV 376
           G I+NF LMYLLAPT AA+S  LPAIFA+CPTSHMFEPGA+G ++R GTFVYKG +FA V
Sbjct: 159 GCILNFTLMYLLAPTAAATSQTLPAIFANCPTSHMFEPGAYGLMNRLGTFVYKGTIFAAV 218

Query: 377 GFAAGLVGTAISNALIVLRKKMDPNFQTPNKPPPTILNALTWSAHMGFSSNFRYQTLNGI 556
           GFAAGLVGTA+SN LI +RKKMDP F+TPNK PPT+LNALTW+ HMGFSSN RYQTLNG 
Sbjct: 219 GFAAGLVGTALSNGLIKMRKKMDPTFETPNKAPPTVLNALTWAIHMGFSSNLRYQTLNGA 278

Query: 557 EFLLAKGLPPAVFKALVVILRCFNNVLGGVSFVTLARLTGSQKVLDSGKTD------SEE 718
           EFLL KGL P  FK  VV+LRC NNVLGG+SFV LAR+TGSQ V +    D      + E
Sbjct: 279 EFLLEKGLSPLAFKTSVVVLRCLNNVLGGMSFVILARMTGSQSVEEPKLVDVDVGLAAPE 338

Query: 719 KEKLVN 736
           KEKL++
Sbjct: 339 KEKLLD 344


>ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209534 isoform 1 [Cucumis
           sativus] gi|449449837|ref|XP_004142671.1| PREDICTED:
           uncharacterized protein LOC101209534 isoform 2 [Cucumis
           sativus] gi|449510965|ref|XP_004163824.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 1 [Cucumis
           sativus] gi|449510969|ref|XP_004163825.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 2 [Cucumis
           sativus]
          Length = 370

 Score =  365 bits (938), Expect = 6e-99
 Identities = 182/255 (71%), Positives = 212/255 (83%), Gaps = 11/255 (4%)
 Frame = +2

Query: 2   EKNAMGIIGIILAGWKSRVLADPQFPFKVLMEELVGVTACLIGDMASRPNFGLNELDFVF 181
           + ++ G++G+ L GW+SRV ADPQFPFKVLMEELVGV++C++GDMASRPNFGLNELDFVF
Sbjct: 104 DSSSFGVLGLFLKGWRSRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVF 163

Query: 182 STLVVGSIMNFVLMYLLAPTMAA--SSSNLPAIFASCPTSHMFEPGAFGPLHRFGTFVYK 355
           STLVVGSI+NF LMYLLAPT AA  ++  LP+IFASCPTSHMFEPGAF  L R GTFVYK
Sbjct: 164 STLVVGSILNFTLMYLLAPTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYK 223

Query: 356 GLVFACVGFAAGLVGTAISNALIVLRKKMDPNFQTPNKPPPTILNALTWSAHMGFSSNFR 535
           G VFA VG AAGLVGTA+SN LI+LRKKMDP F+TPNK PPT+LNA+TW+ HMG SSN R
Sbjct: 224 GTVFAAVGLAAGLVGTALSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLR 283

Query: 536 YQTLNGIEFLLAKGLPPAVFKALVVILRCFNNVLGGVSFVTLARLTGSQKV--------- 688
           YQTLNG+E++LAKGLPP  FK+ VV+LRC NNVLGG+SFV LAR+TGSQ V         
Sbjct: 284 YQTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVE 343

Query: 689 LDSGKTDSEEKEKLV 733
           LDSG    +EKEKL+
Sbjct: 344 LDSG----DEKEKLL 354


>ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|222833469|gb|EEE71946.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  362 bits (930), Expect = 5e-98
 Identities = 172/224 (76%), Positives = 196/224 (87%)
 Frame = +2

Query: 17  GIIGIILAGWKSRVLADPQFPFKVLMEELVGVTACLIGDMASRPNFGLNELDFVFSTLVV 196
           G++G+ L GW+SRV ADPQFPFKVLMEE+VGV+AC++GDMASRPNFGL+ELDFVFSTLVV
Sbjct: 38  GVLGLFLNGWRSRVAADPQFPFKVLMEEVVGVSACVLGDMASRPNFGLDELDFVFSTLVV 97

Query: 197 GSIMNFVLMYLLAPTMAASSSNLPAIFASCPTSHMFEPGAFGPLHRFGTFVYKGLVFACV 376
           G I+NF LMYLLAPT AA+S  LPAIFA+CPTSHMFEPGA+G ++R GTFVYKG +FA V
Sbjct: 98  GCILNFTLMYLLAPTAAATSQTLPAIFANCPTSHMFEPGAYGLMNRLGTFVYKGTIFAAV 157

Query: 377 GFAAGLVGTAISNALIVLRKKMDPNFQTPNKPPPTILNALTWSAHMGFSSNFRYQTLNGI 556
           GFAAGLVGTA+SN LI +RKKMDP F+TPNK PPT+LNALTW+ HMGFSSN RYQTLNG 
Sbjct: 158 GFAAGLVGTALSNGLIKMRKKMDPTFETPNKAPPTVLNALTWAIHMGFSSNLRYQTLNGA 217

Query: 557 EFLLAKGLPPAVFKALVVILRCFNNVLGGVSFVTLARLTGSQKV 688
           EFLL KGL P  FK  VV+LRC NNVLGG+SFV LAR+TGSQ V
Sbjct: 218 EFLLEKGLSPLAFKTSVVVLRCLNNVLGGMSFVILARMTGSQSV 261


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