BLASTX nr result

ID: Coptis23_contig00002636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002636
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
emb|CBI39033.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_003556005.1| PREDICTED: cysteine-rich receptor-like prote...   180   9e-44
ref|XP_003556004.1| PREDICTED: cysteine-rich receptor-like prote...   180   9e-44
ref|XP_002304959.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43

>ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score =  183 bits (465), Expect = 1e-44
 Identities = 93/157 (59%), Positives = 114/157 (72%)
 Frame = +2

Query: 2   YAMHGQFSVKSDVFSFGVLVLEIMSGQKNNSFYDSERAEDLLCYAWRQWEEGTALGLIEP 181
           YAMHGQFSVKSD +SFGVL+LEI+SG+KN+SFY +  A DL  YAW+ W +GT L +++P
Sbjct: 520 YAMHGQFSVKSDAYSFGVLILEIISGKKNSSFYQTGGAADLASYAWKHWRDGTPLEVMDP 579

Query: 182 TLRECYSRNEVMRCIHIGLLCVQEDVARRPTMASVVLMLNSYSVTLPLPTTPAFFSSGRG 361
           TL + YSRNEVMRCIHIGLLCVQED A RPTMA+VVL+LNSYS+TLPLP  PAFF   R 
Sbjct: 580 TLADTYSRNEVMRCIHIGLLCVQEDPASRPTMATVVLLLNSYSITLPLPQEPAFFLHSRT 639

Query: 362 KELDCPTEEHGTNTTNASKPIPPDRSISSAIPESINE 472
            +   P           SK    D+S S+++P S +E
Sbjct: 640 DQGSIP-----------SKEFFADKSKSNSVPYSGDE 665


>emb|CBI39033.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  181 bits (458), Expect = 7e-44
 Identities = 92/131 (70%), Positives = 108/131 (82%)
 Frame = +2

Query: 2   YAMHGQFSVKSDVFSFGVLVLEIMSGQKNNSFYDSERAEDLLCYAWRQWEEGTALGLIEP 181
           YAMHGQFSVKSDVFSFGVL+LEI+SG+KN+ F +SE ++DLL YAWRQW++ TAL LI+P
Sbjct: 477 YAMHGQFSVKSDVFSFGVLLLEILSGKKNSCFNNSECSQDLLSYAWRQWKDRTALELIDP 536

Query: 182 TLRECYSRNEVMRCIHIGLLCVQEDVARRPTMASVVLMLNSYSVTLPLPTTPAFFSSGRG 361
            +   YSR+EVMRCIHIGLLCVQED A RPTMASV LMLNSYSVTLPLP+ PAFF   + 
Sbjct: 537 IVGGEYSRSEVMRCIHIGLLCVQEDAADRPTMASVALMLNSYSVTLPLPSKPAFFLHSK- 595

Query: 362 KELDCPTEEHG 394
           KE +  T + G
Sbjct: 596 KESNPSTSKSG 606


>ref|XP_003556005.1| PREDICTED: cysteine-rich receptor-like protein kinase 29-like
           isoform 2 [Glycine max]
          Length = 679

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/158 (58%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   YAMHGQFSVKSDVFSFGVLVLEIMSGQKNNSFYDSERAEDLLCYAWRQWEEGTALGLIEP 181
           YAMHGQFSVKSDVFSFGVLVLEI+SGQKN+ F+  E  EDLL +AWR W+EGTA+ +++P
Sbjct: 520 YAMHGQFSVKSDVFSFGVLVLEILSGQKNSGFHHGENVEDLLSFAWRSWKEGTAINIVDP 579

Query: 182 TLRECYSRNEVMRCIHIGLLCVQEDVARRPTMASVVLMLNSYSVTLPLPTTPAFFSSGR- 358
           +L    SRNE+MRCIHIGLLCVQE++A RPTMA+++LMLNSYS++LP+P  PAF+ + R 
Sbjct: 580 SLNN-NSRNEMMRCIHIGLLCVQENLADRPTMATIMLMLNSYSLSLPIPAKPAFYMNSRT 638

Query: 359 GKELDCPTEEHGTNTTNASKPIPPDRSISSAIPESINE 472
           G   D  + E+ +  T +S+      SI  +  ES NE
Sbjct: 639 GSLPDMQSWEYNSRETGSSE------SIIKSAQESENE 670


>ref|XP_003556004.1| PREDICTED: cysteine-rich receptor-like protein kinase 29-like
           isoform 1 [Glycine max]
          Length = 687

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/158 (58%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   YAMHGQFSVKSDVFSFGVLVLEIMSGQKNNSFYDSERAEDLLCYAWRQWEEGTALGLIEP 181
           YAMHGQFSVKSDVFSFGVLVLEI+SGQKN+ F+  E  EDLL +AWR W+EGTA+ +++P
Sbjct: 528 YAMHGQFSVKSDVFSFGVLVLEILSGQKNSGFHHGENVEDLLSFAWRSWKEGTAINIVDP 587

Query: 182 TLRECYSRNEVMRCIHIGLLCVQEDVARRPTMASVVLMLNSYSVTLPLPTTPAFFSSGR- 358
           +L    SRNE+MRCIHIGLLCVQE++A RPTMA+++LMLNSYS++LP+P  PAF+ + R 
Sbjct: 588 SLNN-NSRNEMMRCIHIGLLCVQENLADRPTMATIMLMLNSYSLSLPIPAKPAFYMNSRT 646

Query: 359 GKELDCPTEEHGTNTTNASKPIPPDRSISSAIPESINE 472
           G   D  + E+ +  T +S+      SI  +  ES NE
Sbjct: 647 GSLPDMQSWEYNSRETGSSE------SIIKSAQESENE 678


>ref|XP_002304959.1| predicted protein [Populus trichocarpa] gi|222847923|gb|EEE85470.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score =  180 bits (456), Expect = 1e-43
 Identities = 93/158 (58%), Positives = 117/158 (74%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   YAMHGQFSVKSDVFSFGVLVLEIMSGQKNNSFYDSERAEDLLCYAWRQWEEGTALGLIEP 181
           YAMHGQFSVKSDVFSFGVL+LEI+SGQKNN F + E  EDLL YAWR W EGT L +I+P
Sbjct: 493 YAMHGQFSVKSDVFSFGVLILEIVSGQKNNCFRNGETVEDLLSYAWRNWREGTGLNVIDP 552

Query: 182 TLRECYSRNEVMRCIHIGLLCVQEDVARRPTMASVVLMLNSYSVTLPLPTTPAFFSSGRG 361
            L    SR E+MRCIHIGLLCVQE++A RPTMAS+VLML+SYS+TLP+P+ PAFF +   
Sbjct: 553 AL-STGSRTEMMRCIHIGLLCVQENIADRPTMASIVLMLSSYSLTLPVPSQPAFFMNSST 611

Query: 362 KELDCPTE-EHGTNTTNASKPIPPDRSISSAIPESINE 472
            + D  +  ++ +  TN+S+      + + A+P S NE
Sbjct: 612 YQSDISSSMDYNSRVTNSSE------AKTEALPLSANE 643


Top