BLASTX nr result
ID: Coptis23_contig00002630
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002630
(1741 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ... 764 0.0
ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent R... 759 0.0
emb|CBI19932.3| unnamed protein product [Vitis vinifera] 759 0.0
ref|XP_002307470.1| predicted protein [Populus trichocarpa] gi|2... 756 0.0
ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent R... 749 0.0
>ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 789
Score = 764 bits (1973), Expect = 0.0
Identities = 380/460 (82%), Positives = 417/460 (90%)
Frame = +2
Query: 92 ESLSLSPNVYNAIKKKGYRVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLIPMLEKL 271
ESL+LSPNVYN +K+KGYRVPTPIQRKTMP+ILSG DVVAMARTGSGKTAAFLIPMLE+L
Sbjct: 30 ESLNLSPNVYNGVKRKGYRVPTPIQRKTMPIILSGSDVVAMARTGSGKTAAFLIPMLERL 89
Query: 272 KEHVPQNGVRALILSPTRDLAIQTQKFTKELGKFTDLRTSLLVGGESFETQFEELAQSPD 451
K+HV Q G RALILSPTRDLA+QT KFTKELG+FTDLR SLLVGG+S E+QFEELAQ+PD
Sbjct: 90 KQHVSQGGARALILSPTRDLALQTLKFTKELGRFTDLRASLLVGGDSMESQFEELAQNPD 149
Query: 452 IIIATPGRLMHHLSEVDDMSLRTVQYVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF 631
IIIATPGRLMHHLSEVDDMSLRTV+YVVFDEADSLFGMGFAEQLH+ILTQLSENRQTLLF
Sbjct: 150 IIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLF 209
Query: 632 SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLTFFTLRHEEKHAALLYLVREQISS 811
SATLPSALAEFAKAGLRDPQLVRLD++T+ISPDLK FFTLR EEK+AALLYLVRE ISS
Sbjct: 210 SATLPSALAEFAKAGLRDPQLVRLDVDTKISPDLKTVFFTLRQEEKYAALLYLVREHISS 269
Query: 812 DEQTLIFVSTKHHVEFLNTLFKEEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 991
D+QTLIFVSTKHHVEFLN LF+EEGIEPSVCYGDMDQDARKIHVSRFRA+KTMLLIVTDV
Sbjct: 270 DQQTLIFVSTKHHVEFLNILFREEGIEPSVCYGDMDQDARKIHVSRFRAQKTMLLIVTDV 329
Query: 992 AARGIDIPLLDNVINWDFPPKPKIFIHRVXXXXXXXXXXXXFSFVTPEDMPYLLDLHLFL 1171
AARGIDIPLLDNVINWDFPPKPKIF+HRV FSFVT EDMPYLLDLHLFL
Sbjct: 330 AARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFL 389
Query: 1172 SKPVRPAPTEEEVQRDRDGIFSELDDAIANGETIYGRFPQTIIDRVSDSVRGIIDGCTEL 1351
SKP+R APTEEEV +D D + ++++A+ANGETIYGRFPQT++D VSD VR +ID EL
Sbjct: 390 SKPIRAAPTEEEVVKDMDRVMMKINEAVANGETIYGRFPQTVLDLVSDRVREVIDSSAEL 449
Query: 1352 LTLQKTCTNAFRLYSKTKPLPSKESARRAKALPREGLHPL 1471
+LQKTCTNAFRLY+KTKPLP+KES RR K LP EG+HP+
Sbjct: 450 TSLQKTCTNAFRLYTKTKPLPAKESIRRVKDLPHEGIHPI 489
Score = 62.4 bits (150), Expect = 4e-07
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +3
Query: 1584 SSQWVDVMKRKRAVHEEIINLVHQKRSSEQADKDAMEEDEKVNTVSEEKRK 1736
SSQWVDVMKRKRA+HE+IINLVHQ RS +Q DK+ E E ++ +EK++
Sbjct: 534 SSQWVDVMKRKRAIHEKIINLVHQHRSIQQEDKEV--ESEIPSSSGKEKKE 582
>ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Vitis vinifera]
Length = 784
Score = 759 bits (1959), Expect = 0.0
Identities = 378/460 (82%), Positives = 414/460 (90%)
Frame = +2
Query: 92 ESLSLSPNVYNAIKKKGYRVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLIPMLEKL 271
ESL LSPNVY AIK+KGYRVPTPIQRKTMPLILSG DVVAMARTGSGKTAAFLIPMLE+L
Sbjct: 30 ESLGLSPNVYRAIKRKGYRVPTPIQRKTMPLILSGCDVVAMARTGSGKTAAFLIPMLERL 89
Query: 272 KEHVPQNGVRALILSPTRDLAIQTQKFTKELGKFTDLRTSLLVGGESFETQFEELAQSPD 451
K+HVPQ GVRALILSPTRDLA+QT KFTKEL ++TD+R SLLVGG+S E+QFEELAQ+PD
Sbjct: 90 KQHVPQTGVRALILSPTRDLALQTLKFTKELARYTDVRISLLVGGDSMESQFEELAQNPD 149
Query: 452 IIIATPGRLMHHLSEVDDMSLRTVQYVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF 631
IIIATPGRLMHHLSEVDDMSLRTV+YVVFDEAD LFGMGFAEQLHKIL QLS+NRQTLLF
Sbjct: 150 IIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADCLFGMGFAEQLHKILAQLSDNRQTLLF 209
Query: 632 SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLTFFTLRHEEKHAALLYLVREQISS 811
SATLPSALAEFAKAGL+DPQLVRLDL+T+ISPDLK+ FFTLRHEEK AALLYL+REQISS
Sbjct: 210 SATLPSALAEFAKAGLQDPQLVRLDLDTKISPDLKVNFFTLRHEEKLAALLYLIREQISS 269
Query: 812 DEQTLIFVSTKHHVEFLNTLFKEEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 991
D+QTLIFVSTKHHVEFLN LF+EEGIE SVCYGDMDQDARKIH+SRFR+RKTMLLIVTDV
Sbjct: 270 DQQTLIFVSTKHHVEFLNVLFREEGIEASVCYGDMDQDARKIHISRFRSRKTMLLIVTDV 329
Query: 992 AARGIDIPLLDNVINWDFPPKPKIFIHRVXXXXXXXXXXXXFSFVTPEDMPYLLDLHLFL 1171
AARGIDIPLLDNV+NWDFPPKPKIF+HRV FSFVT EDMPYLLDLHLFL
Sbjct: 330 AARGIDIPLLDNVVNWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFL 389
Query: 1172 SKPVRPAPTEEEVQRDRDGIFSELDDAIANGETIYGRFPQTIIDRVSDSVRGIIDGCTEL 1351
SKP+R APTEEEV +D D + S++D +ANG T+YGR PQT+ID VSD VR ++D EL
Sbjct: 390 SKPIRAAPTEEEVLQDPDEVMSKIDQIVANGGTVYGRLPQTVIDLVSDRVRELVDSSAEL 449
Query: 1352 LTLQKTCTNAFRLYSKTKPLPSKESARRAKALPREGLHPL 1471
+LQKTCTNAFRLYSKTKP PS+ES RRAK LPREGLHP+
Sbjct: 450 ASLQKTCTNAFRLYSKTKPSPSRESIRRAKDLPREGLHPI 489
>emb|CBI19932.3| unnamed protein product [Vitis vinifera]
Length = 786
Score = 759 bits (1959), Expect = 0.0
Identities = 378/460 (82%), Positives = 414/460 (90%)
Frame = +2
Query: 92 ESLSLSPNVYNAIKKKGYRVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLIPMLEKL 271
ESL LSPNVY AIK+KGYRVPTPIQRKTMPLILSG DVVAMARTGSGKTAAFLIPMLE+L
Sbjct: 30 ESLGLSPNVYRAIKRKGYRVPTPIQRKTMPLILSGCDVVAMARTGSGKTAAFLIPMLERL 89
Query: 272 KEHVPQNGVRALILSPTRDLAIQTQKFTKELGKFTDLRTSLLVGGESFETQFEELAQSPD 451
K+HVPQ GVRALILSPTRDLA+QT KFTKEL ++TD+R SLLVGG+S E+QFEELAQ+PD
Sbjct: 90 KQHVPQTGVRALILSPTRDLALQTLKFTKELARYTDVRISLLVGGDSMESQFEELAQNPD 149
Query: 452 IIIATPGRLMHHLSEVDDMSLRTVQYVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF 631
IIIATPGRLMHHLSEVDDMSLRTV+YVVFDEAD LFGMGFAEQLHKIL QLS+NRQTLLF
Sbjct: 150 IIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADCLFGMGFAEQLHKILAQLSDNRQTLLF 209
Query: 632 SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLTFFTLRHEEKHAALLYLVREQISS 811
SATLPSALAEFAKAGL+DPQLVRLDL+T+ISPDLK+ FFTLRHEEK AALLYL+REQISS
Sbjct: 210 SATLPSALAEFAKAGLQDPQLVRLDLDTKISPDLKVNFFTLRHEEKLAALLYLIREQISS 269
Query: 812 DEQTLIFVSTKHHVEFLNTLFKEEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 991
D+QTLIFVSTKHHVEFLN LF+EEGIE SVCYGDMDQDARKIH+SRFR+RKTMLLIVTDV
Sbjct: 270 DQQTLIFVSTKHHVEFLNVLFREEGIEASVCYGDMDQDARKIHISRFRSRKTMLLIVTDV 329
Query: 992 AARGIDIPLLDNVINWDFPPKPKIFIHRVXXXXXXXXXXXXFSFVTPEDMPYLLDLHLFL 1171
AARGIDIPLLDNV+NWDFPPKPKIF+HRV FSFVT EDMPYLLDLHLFL
Sbjct: 330 AARGIDIPLLDNVVNWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFL 389
Query: 1172 SKPVRPAPTEEEVQRDRDGIFSELDDAIANGETIYGRFPQTIIDRVSDSVRGIIDGCTEL 1351
SKP+R APTEEEV +D D + S++D +ANG T+YGR PQT+ID VSD VR ++D EL
Sbjct: 390 SKPIRAAPTEEEVLQDPDEVMSKIDQIVANGGTVYGRLPQTVIDLVSDRVRELVDSSAEL 449
Query: 1352 LTLQKTCTNAFRLYSKTKPLPSKESARRAKALPREGLHPL 1471
+LQKTCTNAFRLYSKTKP PS+ES RRAK LPREGLHP+
Sbjct: 450 ASLQKTCTNAFRLYSKTKPSPSRESIRRAKDLPREGLHPI 489
>ref|XP_002307470.1| predicted protein [Populus trichocarpa] gi|222856919|gb|EEE94466.1|
predicted protein [Populus trichocarpa]
Length = 510
Score = 756 bits (1951), Expect = 0.0
Identities = 373/460 (81%), Positives = 417/460 (90%)
Frame = +2
Query: 92 ESLSLSPNVYNAIKKKGYRVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLIPMLEKL 271
ESL+LSPNV+ IK+KGYRVPTPIQRKTMPLIL+GIDVVAMARTGSGKTAAFL+PMLEKL
Sbjct: 28 ESLNLSPNVFRGIKRKGYRVPTPIQRKTMPLILAGIDVVAMARTGSGKTAAFLLPMLEKL 87
Query: 272 KEHVPQNGVRALILSPTRDLAIQTQKFTKELGKFTDLRTSLLVGGESFETQFEELAQSPD 451
K+H+PQ+GVRALILSPTRDLA+QT KFTKELG+FTDLR SLLVGG+ E+QFE+L+Q+PD
Sbjct: 88 KQHLPQSGVRALILSPTRDLALQTLKFTKELGRFTDLRISLLVGGDRMESQFEDLSQNPD 147
Query: 452 IIIATPGRLMHHLSEVDDMSLRTVQYVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF 631
IIIATPGRLMHHLSE+DDMSL+TV+YVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF
Sbjct: 148 IIIATPGRLMHHLSEIDDMSLKTVEYVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF 207
Query: 632 SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLTFFTLRHEEKHAALLYLVREQISS 811
SATLPSALAEFAKAGLRDPQLVRLD++T+ISPDLK FFTLR EEK+AAL+YL+R+ IS+
Sbjct: 208 SATLPSALAEFAKAGLRDPQLVRLDVDTKISPDLKTVFFTLRQEEKYAALIYLIRDHIST 267
Query: 812 DEQTLIFVSTKHHVEFLNTLFKEEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 991
D+QTLIFVSTKHHVEFLN LF+E+GIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV
Sbjct: 268 DQQTLIFVSTKHHVEFLNVLFREDGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 327
Query: 992 AARGIDIPLLDNVINWDFPPKPKIFIHRVXXXXXXXXXXXXFSFVTPEDMPYLLDLHLFL 1171
AARGIDIPLLDNVINWDFPPKPKIF+HRV FSFVT EDMPYLLDLHLFL
Sbjct: 328 AARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAFSFVTSEDMPYLLDLHLFL 387
Query: 1172 SKPVRPAPTEEEVQRDRDGIFSELDDAIANGETIYGRFPQTIIDRVSDSVRGIIDGCTEL 1351
SKPV+ APTEEEV +D DG+ +++D A ANGET+YGRFPQT++D VSD VR IID EL
Sbjct: 388 SKPVKAAPTEEEVLQDIDGVMNKIDQAFANGETVYGRFPQTVLDLVSDRVREIIDSSAEL 447
Query: 1352 LTLQKTCTNAFRLYSKTKPLPSKESARRAKALPREGLHPL 1471
+LQK CTNAFRLY+KTKP P+KES +R K LP EGLHP+
Sbjct: 448 TSLQKACTNAFRLYTKTKPSPAKESIKRVKDLPCEGLHPI 487
>ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 749 bits (1933), Expect = 0.0
Identities = 376/460 (81%), Positives = 406/460 (88%)
Frame = +2
Query: 92 ESLSLSPNVYNAIKKKGYRVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLIPMLEKL 271
ESL L+PNV+ IK+KGY+VPTPIQRKTMPLILSG DVVAMARTGSGKTAAFL+PML +L
Sbjct: 21 ESLGLNPNVFKGIKRKGYKVPTPIQRKTMPLILSGSDVVAMARTGSGKTAAFLVPMLHRL 80
Query: 272 KEHVPQNGVRALILSPTRDLAIQTQKFTKELGKFTDLRTSLLVGGESFETQFEELAQSPD 451
+H+PQ+GVRALILSPTRDLA+QT KFTKELG FTDLR SLLVGG+S E QFEELAQSPD
Sbjct: 81 NQHIPQSGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMEIQFEELAQSPD 140
Query: 452 IIIATPGRLMHHLSEVDDMSLRTVQYVVFDEADSLFGMGFAEQLHKILTQLSENRQTLLF 631
IIIATPGRLMHHLSEVDDMSLR+V+YVVFDEAD LFGMGFAEQLH+IL QL ENRQTLLF
Sbjct: 141 IIIATPGRLMHHLSEVDDMSLRSVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLLF 200
Query: 632 SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLTFFTLRHEEKHAALLYLVREQISS 811
SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKL FFTLR EEK++ALLYLVRE I S
Sbjct: 201 SATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLAFFTLRQEEKYSALLYLVREHIGS 260
Query: 812 DEQTLIFVSTKHHVEFLNTLFKEEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 991
D+QTLIFVSTKHHVEFLN LF+EEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV
Sbjct: 261 DQQTLIFVSTKHHVEFLNVLFREEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDV 320
Query: 992 AARGIDIPLLDNVINWDFPPKPKIFIHRVXXXXXXXXXXXXFSFVTPEDMPYLLDLHLFL 1171
AARGIDIPLLDNVINWDFPPKPKIF+HRV +SFVTPEDM YLLDLHLFL
Sbjct: 321 AARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTPEDMAYLLDLHLFL 380
Query: 1172 SKPVRPAPTEEEVQRDRDGIFSELDDAIANGETIYGRFPQTIIDRVSDSVRGIIDGCTEL 1351
SKP++PAPTEEE +D DG+ S + A+AN ETIYGRFPQ +ID VSD VR IID EL
Sbjct: 381 SKPIKPAPTEEEFLQDMDGVMSRCEQAMANRETIYGRFPQKVIDLVSDRVREIIDTSAEL 440
Query: 1352 LTLQKTCTNAFRLYSKTKPLPSKESARRAKALPREGLHPL 1471
LQ+TC NAFRLYSKTKPLP+KES RR K LP EGLHP+
Sbjct: 441 ELLQRTCKNAFRLYSKTKPLPAKESIRRVKDLPHEGLHPM 480