BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002622
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281399.1| PREDICTED: trafficking protein particle comp...   244   9e-63
ref|XP_002522846.1| Trafficking protein particle complex subunit...   241   1e-61
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   240   2e-61
ref|NP_001151598.1| trafficking protein particle complex subunit...   238   8e-61
gb|AFW59786.1| hypothetical protein ZEAMMB73_570567 [Zea mays]        237   2e-60

>ref|XP_002281399.1| PREDICTED: trafficking protein particle complex subunit 3 [Vitis
           vinifera] gi|147765421|emb|CAN64900.1| hypothetical
           protein VITISV_041653 [Vitis vinifera]
           gi|297735985|emb|CBI23959.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  244 bits (624), Expect = 9e-63
 Identities = 116/124 (93%), Positives = 121/124 (97%)
 Frame = +3

Query: 267 EFLAKSNVSRCVDFKETAEVIAKVGFKMFLGVAASVTNWDVDGTSCSLILEDNPLVDFVE 446
           EFLAKSNVSRCVDFKETAE IAKVGFKMFLGV ASVTNWD DGTSCSL+LEDNPLVDFVE
Sbjct: 63  EFLAKSNVSRCVDFKETAEAIAKVGFKMFLGVTASVTNWDADGTSCSLVLEDNPLVDFVE 122

Query: 447 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDAYELRLKLLKQVPEEYPY 626
           LPDTCQGLYYCNILSGV+RGALEMVSMKTEVTW+RDMLRGDDAYEL++KLLKQVPEEYPY
Sbjct: 123 LPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWIRDMLRGDDAYELQVKLLKQVPEEYPY 182

Query: 627 KDDE 638
           KDDE
Sbjct: 183 KDDE 186



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +1

Query: 16  MAPLAPRSGDAVFANVERVNAELFTLTYGAIVRQLLTDLEEV 141
           MAP APRSGDA+FANVERVNAELFTLTYGAIVRQLLTDLEEV
Sbjct: 1   MAPAAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEV 42


>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  241 bits (615), Expect = 1e-61
 Identities = 115/124 (92%), Positives = 121/124 (97%)
 Frame = +3

Query: 267 EFLAKSNVSRCVDFKETAEVIAKVGFKMFLGVAASVTNWDVDGTSCSLILEDNPLVDFVE 446
           EFLAKSNV+RCVDF+ETAEVIAKVGFKMFLGV+ASVTNWD DGT CS+ILEDNPLVDFVE
Sbjct: 63  EFLAKSNVNRCVDFRETAEVIAKVGFKMFLGVSASVTNWDADGTCCSIILEDNPLVDFVE 122

Query: 447 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDAYELRLKLLKQVPEEYPY 626
           LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTW RDMLRGDDAYEL++KLLKQVPEEYPY
Sbjct: 123 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWARDMLRGDDAYELQVKLLKQVPEEYPY 182

Query: 627 KDDE 638
           KDDE
Sbjct: 183 KDDE 186



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +1

Query: 16  MAPLAPRSGDAVFANVERVNAELFTLTYGAIVRQLLTDLEEV 141
           MAP+ PRSGDA+FA+VERVNAELFTLTYGAIVRQLLTDLEEV
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTLTYGAIVRQLLTDLEEV 42


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  240 bits (613), Expect = 2e-61
 Identities = 113/124 (91%), Positives = 121/124 (97%)
 Frame = +3

Query: 267 EFLAKSNVSRCVDFKETAEVIAKVGFKMFLGVAASVTNWDVDGTSCSLILEDNPLVDFVE 446
           EFLAKSNVSRCVDFKETA+VIAKVGFKMFLGV ASVTNWD DGT CS++LEDNPLVDFVE
Sbjct: 63  EFLAKSNVSRCVDFKETADVIAKVGFKMFLGVGASVTNWDADGTCCSIVLEDNPLVDFVE 122

Query: 447 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDAYELRLKLLKQVPEEYPY 626
           LPDTCQGLYYCNILSGV+RGALEMVSMKTEVTW+RDMLRGDDA+EL++KLLKQVPEEYPY
Sbjct: 123 LPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPY 182

Query: 627 KDDE 638
           KDDE
Sbjct: 183 KDDE 186



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +1

Query: 16  MAPLAPRSGDAVFANVERVNAELFTLTYGAIVRQLLTDLEEV 141
           MAP+APRSGDA+FA+VE VNAELFTLTYGAIVRQLLTDLEEV
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTLTYGAIVRQLLTDLEEV 42


>ref|NP_001151598.1| trafficking protein particle complex subunit 3 [Zea mays]
           gi|195648028|gb|ACG43482.1| trafficking protein particle
           complex subunit 3 [Zea mays]
          Length = 185

 Score =  238 bits (607), Expect = 8e-61
 Identities = 111/124 (89%), Positives = 122/124 (98%)
 Frame = +3

Query: 267 EFLAKSNVSRCVDFKETAEVIAKVGFKMFLGVAASVTNWDVDGTSCSLILEDNPLVDFVE 446
           EFLAKSNVSRCVDFKETA+VIAK+GFKMFLGV A+VTNWDV+GTSCS++LEDNPLVDFVE
Sbjct: 62  EFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTATVTNWDVEGTSCSIVLEDNPLVDFVE 121

Query: 447 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDAYELRLKLLKQVPEEYPY 626
           LPDTCQGL YCN+LSGVIRGALEMVSMKTEVTWLRDMLRGDDAYE+R+KL+KQVPEEYPY
Sbjct: 122 LPDTCQGLQYCNLLSGVIRGALEMVSMKTEVTWLRDMLRGDDAYEMRVKLIKQVPEEYPY 181

Query: 627 KDDE 638
           KDD+
Sbjct: 182 KDDD 185



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 22  PLAPRSGDAVFANVERVNAELFTLTYGAIVRQLLTDLEEV 141
           P AP+SGDA+FA+V+RVNAELFTLTYGAIVRQLLTDLEEV
Sbjct: 2   PPAPKSGDALFASVDRVNAELFTLTYGAIVRQLLTDLEEV 41


>gb|AFW59786.1| hypothetical protein ZEAMMB73_570567 [Zea mays]
          Length = 214

 Score =  237 bits (604), Expect = 2e-60
 Identities = 110/124 (88%), Positives = 122/124 (98%)
 Frame = +3

Query: 267 EFLAKSNVSRCVDFKETAEVIAKVGFKMFLGVAASVTNWDVDGTSCSLILEDNPLVDFVE 446
           EFLAKSNVSRCVDFKETA+VIAK+GFKMFLGV A+VTNWDV+GTSCS++LEDNPLVDFVE
Sbjct: 91  EFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTATVTNWDVEGTSCSIVLEDNPLVDFVE 150

Query: 447 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDAYELRLKLLKQVPEEYPY 626
           LPDTCQGL YCN+LSGVIRGALEMVSMKTEVTW+RDMLRGDDAYE+R+KL+KQVPEEYPY
Sbjct: 151 LPDTCQGLQYCNLLSGVIRGALEMVSMKTEVTWVRDMLRGDDAYEMRVKLIKQVPEEYPY 210

Query: 627 KDDE 638
           KDD+
Sbjct: 211 KDDD 214



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 29/69 (42%)
 Frame = +1

Query: 22  PLAPRSGDAVFANVERV-----------------------------NAELFTLTYGAIVR 114
           P AP+SGDA+FA+V+RV                             NAELFTLTYGAIVR
Sbjct: 2   PPAPKSGDALFASVDRVVSRCSRRPDADARSGLGLVVIALLVHRLQNAELFTLTYGAIVR 61

Query: 115 QLLTDLEEV 141
           QLLTDLEEV
Sbjct: 62  QLLTDLEEV 70