BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002607
         (1980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit...   270   8e-78
ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2...   259   1e-74
emb|CBI16978.3| unnamed protein product [Vitis vinifera]              262   5e-74
ref|XP_002265123.1| PREDICTED: PHD finger protein At1g33420-like...   262   5e-74
ref|NP_564424.1| PHD finger protein [Arabidopsis thaliana] gi|73...   257   4e-73

>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
            gi|296084820|emb|CBI27702.3| unnamed protein product
            [Vitis vinifera]
          Length = 692

 Score =  270 bits (690), Expect(2) = 8e-78
 Identities = 136/252 (53%), Positives = 179/252 (71%), Gaps = 6/252 (2%)
 Frame = -3

Query: 1783 VSRNELSSILSMDGFNCPSKEHLLRDLRFLYDALLNPQTMMSYRPKTTREDAICSAIKLL 1604
            +  N +++    +  NC S++HLL+DLRFLY+A+LNPQTM SY P+ TR+ A+ SA KLL
Sbjct: 434  IPSNGIAACTDFNLSNCRSEQHLLQDLRFLYEAILNPQTMPSYGPQATRDLAVSSAAKLL 493

Query: 1603 DCKQFIKDYESAR-VAMTSPYVLTLLCQVELIGHPAEY-TEPPPEPVFLPVNKTVAELKI 1430
            DCKQF+KDY   + +++T+P+ + L C VEL+    E  T+PPPE + L  N T+++LK+
Sbjct: 494  DCKQFVKDYRPEKGLSITNPFGVHLSCLVELMELSEEGDTKPPPELIVLSPNATISDLKL 553

Query: 1429 EVAKAFQEVYLLFKRFQVEELPGYGQVDDSSQVKLLIGYTGSVRVQGRFLSLCGLDHFRM 1250
            E ++AFQ+VYL+FKRF+ EEL GY  VD+S+Q+KLL+G   +V V+GR L   GL  FRM
Sbjct: 554  EASRAFQDVYLMFKRFKAEELVGYAGVDESTQLKLLLGSIETVEVRGRCLGKNGLSRFRM 613

Query: 1249 ERGTEIWTVSCMCGAKDDDGERMLACDICGTWQHTRCAGISDLEPVPERFICCKCKSIKQ 1070
            ERG E WTV C CGAKDDDGERMLACD CG WQHTRCA I D   VP RFIC +C S  Q
Sbjct: 614  ERGQERWTVDCSCGAKDDDGERMLACDGCGVWQHTRCAEIPDSAAVPARFICWRCGSSGQ 673

Query: 1069 ----TTKHTKSD 1046
                 ++H K +
Sbjct: 674  MPTPASEHCKDE 685



 Score = 49.3 bits (116), Expect(2) = 8e-78
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -1

Query: 1974 ELLDYCLKVLGGKVLDDGRMVLSRCNPELDAIEYR*D 1864
            ELLDYCLK LGGK+   G +V  RCNP+  A+EYR D
Sbjct: 394  ELLDYCLKELGGKLTSYGVVVQVRCNPDSGAVEYRLD 430


>ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1|
            predicted protein [Populus trichocarpa]
          Length = 688

 Score =  259 bits (662), Expect(2) = 1e-74
 Identities = 128/235 (54%), Positives = 163/235 (69%), Gaps = 2/235 (0%)
 Frame = -3

Query: 1780 SRNELSSILSMDGFNCPSKEHLLRDLRFLYDALLNPQTMMSYRPKTTREDAICSAIKLLD 1601
            S N  ++ +      CPS+E+L++DLRFLY+ +L PQTM+S+  + T +  I SA KLLD
Sbjct: 450  SLNSTAAAIGSTVITCPSEENLIQDLRFLYENMLLPQTMLSFGHEVTSDAGIISARKLLD 509

Query: 1600 CKQFIKDYESARVAMTS-PYVLTLLCQVELIGHPAEYTEP-PPEPVFLPVNKTVAELKIE 1427
            CKQF+KDY      + S P  + L C+VE++    E     PPE V LP N TV +LK E
Sbjct: 510  CKQFMKDYNKCETTVASVPNTIFLSCEVEIVDQLEENVPNLPPETVVLPSNATVFDLKRE 569

Query: 1426 VAKAFQEVYLLFKRFQVEELPGYGQVDDSSQVKLLIGYTGSVRVQGRFLSLCGLDHFRME 1247
             ++AFQ+VYL+F+RF  EEL GY  VDDS+QVKLLIG   SV+ +GR L   GL  FRME
Sbjct: 570  ASRAFQDVYLMFRRFHAEELLGYSGVDDSTQVKLLIGSAESVQFRGRCLGKNGLGKFRME 629

Query: 1246 RGTEIWTVSCMCGAKDDDGERMLACDICGTWQHTRCAGISDLEPVPERFICCKCK 1082
            RGTE WTV C CGAKDDDGERMLACD+CG WQHTRC+GI D + VP +F+C +C+
Sbjct: 630  RGTEGWTVDCCCGAKDDDGERMLACDVCGVWQHTRCSGIPDSDSVPAKFVCLRCR 684



 Score = 49.7 bits (117), Expect(2) = 1e-74
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = -1

Query: 1974 ELLDYCLKVLGGKVLDDGRMVLSRCNPELDAIEYR 1870
            ELLD+CLK LGGK   DG +V SRCNP   A EYR
Sbjct: 409  ELLDHCLKELGGKFAADGMIVSSRCNPSSGAFEYR 443


>emb|CBI16978.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  262 bits (670), Expect(2) = 5e-74
 Identities = 130/284 (45%), Positives = 183/284 (64%), Gaps = 5/284 (1%)
 Frame = -3

Query: 1807 PRPPLNRLVSRNELSSILSMDGFNCPSKEHLLRDLRFLYDALLNPQTMMSYRPKTTREDA 1628
            P+  +N  +  + L S  S+     PSK  ++ DLR+LY+++LNPQTM++YRPK TRE A
Sbjct: 431  PQSCINNSIRVDSLDSNSSL-----PSKGQVIDDLRYLYNSILNPQTMVTYRPKATRELA 485

Query: 1627 ICSAIKLLDCKQFIKDYESARVAMTSPYVLTLLCQVELIGHPAEYTEPPPEPVFLPVNKT 1448
            + SA KLLDCKQFIKDY+  RVA+ +P+ + L C VEL  +  +Y  PPPE + LP N T
Sbjct: 486  VESAKKLLDCKQFIKDYKVERVAVKNPFAIHLWCHVELEDYSQDYPFPPPELLVLPTNAT 545

Query: 1447 VAELKIEVAKAFQEVYLLFKRFQVEELPGYGQVDDSSQVKLLIGYTGSVRVQGRFLSLCG 1268
            + +LK E  KAF+EVY++FKRF ++ELP +G+++ S  + LL G  GSVR++GR  +  G
Sbjct: 546  ITDLKREATKAFKEVYVVFKRFYIQELPDFGRIEGSVTLNLLFGSRGSVRIRGRCNAKYG 605

Query: 1267 LDHFRMERGTEIWTVSCMCGAKDDDGERMLACDICGTWQHTRCAGISDLEPVPERFICCK 1088
            L  F+ ERGTE W V C+CG KDDDGERMLACD C  WQHTRC GI + + +P +F+C +
Sbjct: 606  LGRFQAERGTETWIVDCICGTKDDDGERMLACDKCSVWQHTRCVGIENSDEIPAKFLCER 665

Query: 1087 CKSIKQTTKHTKSDGKLRSGKKL-----ILYDGTDAKMGSHSNN 971
            C           S      G+++      L DG ++++  +  N
Sbjct: 666  CLGSSCAETKCSSGSSSPRGEEVEAEYECLIDGVESRILKNEAN 709



 Score = 44.3 bits (103), Expect(2) = 5e-74
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = -1

Query: 1980 SSELLDYCLKVLGGKVLDDGRMVLSRCNPELDAIEYR 1870
            S EL+DYCLK L G+V  DG +V +R NP  +A+E+R
Sbjct: 392  SPELIDYCLKHLVGRVTGDGMVVRTRYNPNSNAVEFR 428


>ref|XP_002265123.1| PREDICTED: PHD finger protein At1g33420-like [Vitis vinifera]
          Length = 739

 Score =  262 bits (670), Expect(2) = 5e-74
 Identities = 130/284 (45%), Positives = 183/284 (64%), Gaps = 5/284 (1%)
 Frame = -3

Query: 1807 PRPPLNRLVSRNELSSILSMDGFNCPSKEHLLRDLRFLYDALLNPQTMMSYRPKTTREDA 1628
            P+  +N  +  + L S  S+     PSK  ++ DLR+LY+++LNPQTM++YRPK TRE A
Sbjct: 430  PQSCINNSIRVDSLDSNSSL-----PSKGQVIDDLRYLYNSILNPQTMVTYRPKATRELA 484

Query: 1627 ICSAIKLLDCKQFIKDYESARVAMTSPYVLTLLCQVELIGHPAEYTEPPPEPVFLPVNKT 1448
            + SA KLLDCKQFIKDY+  RVA+ +P+ + L C VEL  +  +Y  PPPE + LP N T
Sbjct: 485  VESAKKLLDCKQFIKDYKVERVAVKNPFAIHLWCHVELEDYSQDYPFPPPELLVLPTNAT 544

Query: 1447 VAELKIEVAKAFQEVYLLFKRFQVEELPGYGQVDDSSQVKLLIGYTGSVRVQGRFLSLCG 1268
            + +LK E  KAF+EVY++FKRF ++ELP +G+++ S  + LL G  GSVR++GR  +  G
Sbjct: 545  ITDLKREATKAFKEVYVVFKRFYIQELPDFGRIEGSVTLNLLFGSRGSVRIRGRCNAKYG 604

Query: 1267 LDHFRMERGTEIWTVSCMCGAKDDDGERMLACDICGTWQHTRCAGISDLEPVPERFICCK 1088
            L  F+ ERGTE W V C+CG KDDDGERMLACD C  WQHTRC GI + + +P +F+C +
Sbjct: 605  LGRFQAERGTETWIVDCICGTKDDDGERMLACDKCSVWQHTRCVGIENSDEIPAKFLCER 664

Query: 1087 CKSIKQTTKHTKSDGKLRSGKKL-----ILYDGTDAKMGSHSNN 971
            C           S      G+++      L DG ++++  +  N
Sbjct: 665  CLGSSCAETKCSSGSSSPRGEEVEAEYECLIDGVESRILKNEAN 708



 Score = 44.3 bits (103), Expect(2) = 5e-74
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = -1

Query: 1980 SSELLDYCLKVLGGKVLDDGRMVLSRCNPELDAIEYR 1870
            S EL+DYCLK L G+V  DG +V +R NP  +A+E+R
Sbjct: 391  SPELIDYCLKHLVGRVTGDGMVVRTRYNPNSNAVEFR 427


>ref|NP_564424.1| PHD finger protein [Arabidopsis thaliana]
            gi|73920515|sp|Q9C810.1|Y1342_ARATH RecName: Full=PHD
            finger protein At1g33420
            gi|12322372|gb|AAG51204.1|AC051630_1 hypothetical
            protein; 47104-44821 [Arabidopsis thaliana]
            gi|14334762|gb|AAK59559.1| unknown protein [Arabidopsis
            thaliana] gi|15293255|gb|AAK93738.1| unknown protein
            [Arabidopsis thaliana] gi|332193471|gb|AEE31592.1| PHD
            finger protein [Arabidopsis thaliana]
          Length = 697

 Score =  257 bits (657), Expect(2) = 4e-73
 Identities = 136/274 (49%), Positives = 177/274 (64%), Gaps = 2/274 (0%)
 Frame = -3

Query: 1789 RLVSRNELSSILSMDGFNCPSKEHLLRDLRFLYDALLNPQTMMSYRPKTTREDAICSAIK 1610
            RL S N +  + + D  N  S EH+ +DLR+LY+ LL+PQTM  +R + TRE  I +A K
Sbjct: 421  RLESVNNVHRLSNQD-VNNASVEHVKQDLRYLYETLLHPQTMAEFRSRATREKMIDAATK 479

Query: 1609 LLDCKQFIKDYESARVAMTSPYVLTLLCQVELIGHPAEYTEPPPEPVFLPVNKTVAELKI 1430
            +LDCK FIKDY S+ V   +P  + L C VEL     E   PPPE + LP+N TV++LKI
Sbjct: 480  ILDCKHFIKDYLSSTV---NPVAINLWCCVELSDELKESPAPPPERLVLPLNATVSDLKI 536

Query: 1429 EVAKAFQEVYLLFKRFQVEELPGYGQVDDSSQVKLLIGYTGSVRVQGRFLSLCGLDHFRM 1250
            E AKAFQEVY +FKRF+VEEL GYG +DDS  +K L+G  G +R++GR  S  GL  +RM
Sbjct: 537  EAAKAFQEVYAMFKRFEVEELLGYGSIDDSITLKFLVGTNGVIRIKGR-CSKHGLLRYRM 595

Query: 1249 ERGTEIWTVSCMCGAKDDDGERMLACDICGTWQHTRCAGISDLEPVPERFICCKCKSI-- 1076
            ERG + W V C CG KDDDGERMLACD CG W HTRC GI++ + +P +F+C +C  +  
Sbjct: 596  ERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELYS 655

Query: 1075 KQTTKHTKSDGKLRSGKKLILYDGTDAKMGSHSN 974
            K+  +  K  G  +  K   +  G  A MGS SN
Sbjct: 656  KKPKQSKKERGSSQVPKAGFVCRGESAAMGSGSN 689



 Score = 46.2 bits (108), Expect(2) = 4e-73
 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = -1

Query: 1980 SSELLDYCLKVLGGKVLDDG-RMVLSRCNPELDAIEYR 1870
            S +L+DYCLK  GG ++DDG R+V SRCNP  +  EYR
Sbjct: 384  SPQLIDYCLKHFGGVLVDDGSRVVSSRCNPGSNDFEYR 421