BLASTX nr result

ID: Coptis23_contig00002604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002604
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261...    91   2e-16
ref|XP_003632697.1| PREDICTED: uncharacterized protein LOC100854...    91   2e-16
ref|NP_001173447.1| Os03g0380600 [Oryza sativa Japonica Group] g...    82   7e-14
gb|EEE59152.1| hypothetical protein OsJ_11060 [Oryza sativa Japo...    82   7e-14
gb|AAL58236.1|AC084762_10 putative far-red impaired response pro...    82   7e-14

>ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261419 [Vitis vinifera]
          Length = 1410

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -3

Query: 638  FETEKFKKLNTKNKANRGQKKVNHHDGSRSFLNH-QADKVNAETQQEPGRIE-FYCMYFN 465
            F  EKFKK  T N  NR +   NH  GS+ F  H Q + ++  T +  G +E F   ++N
Sbjct: 1247 FSLEKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYN 1306

Query: 464  PGKGWSSPVVQENYDKMLEIQTQSLQEGSTPMTEDEIADKVLGTKPGYVMGLGHGVDPLS 285
              KGW +   +  Y++M ++Q QS Q+G TP+++ EI  +VLG + GY+ GLG+G     
Sbjct: 1307 ESKGWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR 1366

Query: 284  SSSYNNPEVE 255
            S++   P+ E
Sbjct: 1367 STTTEFPDEE 1376


>ref|XP_003632697.1| PREDICTED: uncharacterized protein LOC100854636 [Vitis vinifera]
          Length = 1040

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -3

Query: 638  FETEKFKKLNTKNKANRGQKKVNHHDGSRSFLNH-QADKVNAETQQEPGRIE-FYCMYFN 465
            F  EKFKK  T N  NR +   NH  GS+ F  H Q + ++  T +  G +E F   ++N
Sbjct: 852  FSLEKFKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYN 911

Query: 464  PGKGWSSPVVQENYDKMLEIQTQSLQEGSTPMTEDEIADKVLGTKPGYVMGLGHGVDPLS 285
              KGW +   +  Y++M ++Q QS Q+G TP+++ EI  +VLG + GY+ GLG+G     
Sbjct: 912  ESKGWINDTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKR 971

Query: 284  SSSYNNPEVE 255
            S++   P+ E
Sbjct: 972  STTTEFPDEE 981


>ref|NP_001173447.1| Os03g0380600 [Oryza sativa Japonica Group]
            gi|255674545|dbj|BAH92175.1| Os03g0380600 [Oryza sativa
            Japonica Group]
          Length = 1073

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 44/118 (37%), Positives = 66/118 (55%)
 Frame = -3

Query: 644  DWFETEKFKKLNTKNKANRGQKKVNHHDGSRSFLNHQADKVNAETQQEPGRIEFYCMYFN 465
            D FETE+F+K +T  K NR      H  G++SF       V  + +   G I  Y   ++
Sbjct: 703  DHFETEEFQKRSTIGKDNRSNLPYMHWKGTKSF-------VALQHELGCGDITLYKECYS 755

Query: 464  PGKGWSSPVVQENYDKMLEIQTQSLQEGSTPMTEDEIADKVLGTKPGYVMGLGHGVDP 291
              KGW+S   +E +D+M+ +Q +S+Q+   P+TE +I +KVLG   GY+ G GHG  P
Sbjct: 756  NDKGWASSDAREKHDQMVRMQEESMQQDEIPLTEPQICEKVLGKAYGYIRGRGHGPKP 813


>gb|EEE59152.1| hypothetical protein OsJ_11060 [Oryza sativa Japonica Group]
          Length = 611

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 44/118 (37%), Positives = 66/118 (55%)
 Frame = -3

Query: 644 DWFETEKFKKLNTKNKANRGQKKVNHHDGSRSFLNHQADKVNAETQQEPGRIEFYCMYFN 465
           D FETE+F+K +T  K NR      H  G++SF       V  + +   G I  Y   ++
Sbjct: 174 DHFETEEFQKRSTIGKDNRSNLPYMHWKGTKSF-------VALQHELGCGDITLYKECYS 226

Query: 464 PGKGWSSPVVQENYDKMLEIQTQSLQEGSTPMTEDEIADKVLGTKPGYVMGLGHGVDP 291
             KGW+S   +E +D+M+ +Q +S+Q+   P+TE +I +KVLG   GY+ G GHG  P
Sbjct: 227 NDKGWASSDAREKHDQMVRMQEESMQQDEIPLTEPQICEKVLGKAYGYIRGRGHGPKP 284


>gb|AAL58236.1|AC084762_10 putative far-red impaired response protein [Oryza sativa Japonica
           Group] gi|40882702|gb|AAR96243.1| expressed protein
           [Oryza sativa Japonica Group]
           gi|108708466|gb|ABF96261.1| expressed protein [Oryza
           sativa Japonica Group]
          Length = 515

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 44/118 (37%), Positives = 66/118 (55%)
 Frame = -3

Query: 644 DWFETEKFKKLNTKNKANRGQKKVNHHDGSRSFLNHQADKVNAETQQEPGRIEFYCMYFN 465
           D FETE+F+K +T  K NR      H  G++SF       V  + +   G I  Y   ++
Sbjct: 78  DHFETEEFQKRSTIGKDNRSNLPYMHWKGTKSF-------VALQHELGCGDITLYKECYS 130

Query: 464 PGKGWSSPVVQENYDKMLEIQTQSLQEGSTPMTEDEIADKVLGTKPGYVMGLGHGVDP 291
             KGW+S   +E +D+M+ +Q +S+Q+   P+TE +I +KVLG   GY+ G GHG  P
Sbjct: 131 NDKGWASSDAREKHDQMVRMQEESMQQDEIPLTEPQICEKVLGKAYGYIRGRGHGPKP 188


Top