BLASTX nr result

ID: Coptis23_contig00002602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002602
         (1382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511938.1| Protein ABIL1, putative [Ricinus communis] g...   413   e-113
ref|XP_002320167.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110
ref|XP_002301384.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_002279419.1| PREDICTED: protein ABIL1 [Vitis vinifera]         396   e-108
emb|CAN69308.1| hypothetical protein VITISV_003083 [Vitis vinifera]   393   e-107

>ref|XP_002511938.1| Protein ABIL1, putative [Ricinus communis]
           gi|223549118|gb|EEF50607.1| Protein ABIL1, putative
           [Ricinus communis]
          Length = 307

 Score =  413 bits (1061), Expect = e-113
 Identities = 208/297 (70%), Positives = 240/297 (80%), Gaps = 1/297 (0%)
 Frame = +3

Query: 87  VEMQQLRTENPSMSFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 266
           +EM+Q + ENP M++D+VSMERSKSF+KALQELKNLRPQLYSAAEYCEKSYL+SEQKQMV
Sbjct: 1   MEMEQSKPENPHMTYDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60

Query: 267 LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 446
           LDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQT++VST ELKVSC+NQ+LLTC+TYT K
Sbjct: 61  LDNLKDYAVRALVNAVDHLGTVAYKLTDLIEQQTLDVSTMELKVSCINQQLLTCQTYTHK 120

Query: 447 EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 626
           EG+RQQQL   IPRHHKHYILPNS NKKVHFSP IQ +ARQ    A  RL P+G+PAS T
Sbjct: 121 EGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQTDARQIPFQARSRLQPSGSPASKT 180

Query: 627 LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKASSPRLQ-SAGK 803
           LSWHLASETKSTL G  H+ T  +D +  G +SAVF L D E+   +++S    Q S+G 
Sbjct: 181 LSWHLASETKSTLKGTSHALTSAEDTKHSGKSSAVFQLFDKEDGTQTRSSGAFTQLSSGA 240

Query: 804 GPSNAVLQTFGATRRDSLENSKPLTPFRSFDNPHRHGTVHVPVRSKSMLSVFFPKHK 974
             S A++QTFG  RR++L++SKPLT FRSFDNP R   V  P RSKSMLS FF KHK
Sbjct: 241 PASGAIMQTFGVARREALDSSKPLTAFRSFDNPRRE-IVRAPARSKSMLSAFFVKHK 296


>ref|XP_002320167.1| predicted protein [Populus trichocarpa] gi|222860940|gb|EEE98482.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  403 bits (1035), Expect = e-110
 Identities = 208/300 (69%), Positives = 238/300 (79%), Gaps = 3/300 (1%)
 Frame = +3

Query: 84  LVEMQQLRTENPSMSFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQM 263
           ++E++Q R ENP+M+FD+VSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYL+SEQKQ 
Sbjct: 1   MMELEQTRPENPAMTFDEVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLHSEQKQT 60

Query: 264 VLDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTD 443
           VLDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQ +EVST E+KVSC+NQ+ LTC+TYTD
Sbjct: 61  VLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQALEVSTMEVKVSCMNQQYLTCQTYTD 120

Query: 444 KEGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHP--AGTPA 617
           KEG+RQQQL   IPRHHKHY+L NS NKKVHFSPQIQ +ARQ    A  RL P  +G+PA
Sbjct: 121 KEGLRQQQLLAFIPRHHKHYVLQNSVNKKVHFSPQIQTDARQNHFQARSRLQPFASGSPA 180

Query: 618 SNTLSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKASSPRLQSA 797
           S TLSWHLASETKSTL G  H  T  +D +T G  S VF LLD EE+  +++S    Q +
Sbjct: 181 SKTLSWHLASETKSTLKGT-HVMTSNEDTKTSGKPSVVFQLLDKEESAKTRSSGAPAQLS 239

Query: 798 GKGP-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPHRHGTVHVPVRSKSMLSVFFPKHK 974
             GP + A++Q FG  RR+  + SKPLTPFRSFDNP RH  V  PVRSKSMLS FF K K
Sbjct: 240 SGGPAAGAIMQKFGVPRRELSDGSKPLTPFRSFDNP-RHEIVRAPVRSKSMLSAFFVKQK 298


>ref|XP_002301384.1| predicted protein [Populus trichocarpa] gi|222843110|gb|EEE80657.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  402 bits (1032), Expect = e-109
 Identities = 206/300 (68%), Positives = 236/300 (78%), Gaps = 1/300 (0%)
 Frame = +3

Query: 87  VEMQQLRTENPSMSFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 266
           +E+ Q R ENP+M+FD+VSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYL+SEQKQ V
Sbjct: 1   MELDQTRPENPAMTFDEVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLHSEQKQTV 60

Query: 267 LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 446
           LDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQT +VST E+KVSCLNQ+ LTC+TYT K
Sbjct: 61  LDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTFDVSTMEVKVSCLNQQFLTCQTYTVK 120

Query: 447 EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 626
            G+RQQQL   IPRHHKHYILPNS NKKVHFSPQIQ +ARQ    A  RL  +G+PAS T
Sbjct: 121 GGLRQQQLLAFIPRHHKHYILPNSFNKKVHFSPQIQTDARQNHFQARSRLQLSGSPASKT 180

Query: 627 LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKASSPRLQSAGKG 806
           LSWHL SETKSTL G  H+ T  +D +  G +SAVF LLD EE+  +++S    Q + +G
Sbjct: 181 LSWHLVSETKSTLKGTLHAMTSNEDAKASGKSSAVFQLLDEEESRKTRSSGGLAQLSSRG 240

Query: 807 P-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPHRHGTVHVPVRSKSMLSVFFPKHKNKR 983
           P + A++ TF   RR+ L+ SKPLT FRSFDNP RH  V  PVRSKSMLS FF K K  +
Sbjct: 241 PAAGAIMPTFDVPRRELLDTSKPLTAFRSFDNP-RHEIVRAPVRSKSMLSAFFVKQKTPK 299


>ref|XP_002279419.1| PREDICTED: protein ABIL1 [Vitis vinifera]
          Length = 302

 Score =  396 bits (1017), Expect = e-108
 Identities = 202/302 (66%), Positives = 236/302 (78%), Gaps = 3/302 (0%)
 Frame = +3

Query: 87  VEMQQLRTENPSMSFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 266
           +E+Q+ R E+P+M+FD+VSMERSKSF+KALQELKNLRPQLYSAAEYCEKSYL+SEQKQMV
Sbjct: 1   MELQESRAEHPAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60

Query: 267 LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 446
           LDNLKDYAVRALVNAVDHLGTVAYKLTDL +QQT++VST ELKVSC+NQ+LLTC+TY DK
Sbjct: 61  LDNLKDYAVRALVNAVDHLGTVAYKLTDLLDQQTLDVSTMELKVSCVNQKLLTCQTYMDK 120

Query: 447 EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 626
           EG+RQQQL   IPRHHKHYILPNS NKKVHFS Q+Q +A Q  I A PR++P G   S T
Sbjct: 121 EGIRQQQLLAFIPRHHKHYILPNSVNKKVHFSLQVQRDASQNHIQARPRIYPTGNATSKT 180

Query: 627 LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKASSPRLQSAGKG 806
           LSWHLASETKSTL G+ ++F  T++P T G TS VFHLLD EE + + +  P       G
Sbjct: 181 LSWHLASETKSTLKGSANAFLSTNEPETSGKTSRVFHLLDSEETIRT-SGGPAGGGPSSG 239

Query: 807 P-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPHRH--GTVHVPVRSKSMLSVFFPKHKN 977
           P S+AV Q+ G   RDS E +KP+ PFRSFDN +R      H   RSKS+LS FF K K 
Sbjct: 240 PASSAVTQSLGVVWRDSSEGTKPVMPFRSFDNRNRRPMALAHPAARSKSVLSAFFAKQKT 299

Query: 978 KR 983
            R
Sbjct: 300 PR 301


>emb|CAN69308.1| hypothetical protein VITISV_003083 [Vitis vinifera]
          Length = 302

 Score =  393 bits (1009), Expect = e-107
 Identities = 200/302 (66%), Positives = 234/302 (77%), Gaps = 3/302 (0%)
 Frame = +3

Query: 87  VEMQQLRTENPSMSFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 266
           +E+Q+ R E+P+M+FD+VSMERSKSF+KALQELKNLRPQLYSAAEYCEKSYL+SEQKQMV
Sbjct: 1   MELQESRXEHPAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60

Query: 267 LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 446
           LDNLKDYAVRALVNAVDHLGTVAYKLTDL +QQT++VST ELKVSC+NQ+LLTC+TY DK
Sbjct: 61  LDNLKDYAVRALVNAVDHLGTVAYKLTDLLDQQTLDVSTMELKVSCVNQKLLTCQTYMDK 120

Query: 447 EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 626
           EG+RQQQL   IPRHHKHYILPNS NKKVHFS Q+Q +A Q    A PR++P G   S T
Sbjct: 121 EGIRQQQLLAFIPRHHKHYILPNSVNKKVHFSXQVQRDASQNXXQARPRIYPTGNATSKT 180

Query: 627 LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKASSPRLQSAGKG 806
           LSWHLASETKSTL G+ ++F  T++P T G TS VFHLLD EE + + +  P       G
Sbjct: 181 LSWHLASETKSTLKGSANAFLSTNEPETSGKTSRVFHLLDSEEXIRT-SGGPAGGGPSSG 239

Query: 807 P-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPHRH--GTVHVPVRSKSMLSVFFPKHKN 977
           P S+AV Q+ G   RD  E +KP+ PFRSFDN +R      H   RSKS+LS FF K K 
Sbjct: 240 PASSAVTQSLGVVWRDXSEGTKPVMPFRSFDNRNRRPMALAHPAARSKSVLSAFFAKQKT 299

Query: 978 KR 983
            R
Sbjct: 300 PR 301


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