BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002594
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatul...   501   e-139
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   499   e-139
ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [...   499   e-139
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22...   498   e-139
gb|ACU24295.1| unknown [Glycine max]                                  497   e-138

>ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
           gi|355505623|gb|AES86765.1| 40S ribosomal protein S4
           [Medicago truncatula]
          Length = 264

 Score =  501 bits (1289), Expect = e-139
 Identities = 240/264 (90%), Positives = 256/264 (96%)
 Frame = +2

Query: 50  MARGLKKHLKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 229
           MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 230 VVAILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 409
           V+AILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 410 FKLCKVRSVQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNV 589
           FKLCKVRSVQ GQKGIPYLNTYDGRTIRYPDPLI+ANDTIKLDLE++KI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNV 180

Query: 590 IMVTGGRNRGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGTKPWLSLPK 769
           +MVTGGRNRGRVG+IK REKH GTFET+HVQDA+GHEFATRLGNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 770 GRGIKLTVIEEARKRQSAQAATPA 841
           G+GIKLTVIEEARKRQ+AQ  T A
Sbjct: 241 GKGIKLTVIEEARKRQAAQNVTAA 264


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  499 bits (1286), Expect = e-139
 Identities = 239/264 (90%), Positives = 256/264 (96%)
 Frame = +2

Query: 50  MARGLKKHLKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 229
           MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 230 VVAILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 409
           V+AILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 410 FKLCKVRSVQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNV 589
           FKLCKVRSVQ GQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLE +KIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 590 IMVTGGRNRGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGTKPWLSLPK 769
           +MVTGGRNRGRVG+IK REKH G+FET+HVQDATGHEFATR+GNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 770 GRGIKLTVIEEARKRQSAQAATPA 841
           G+GIKL++IEEARKR +AQ AT A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATAA 264


>ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  499 bits (1286), Expect = e-139
 Identities = 239/264 (90%), Positives = 256/264 (96%)
 Frame = +2

Query: 50  MARGLKKHLKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 229
           MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 230 VVAILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 409
           V+AILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+D+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 410 FKLCKVRSVQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNV 589
           FKLCKVRSVQ GQKGIPYLNTYDGRTIRYPDPLIRANDT+KLDLE +KIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180

Query: 590 IMVTGGRNRGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGTKPWLSLPK 769
           +MVTGGRNRGRVG+IK REKH G+FET+HVQDATGHEFATR+GNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 770 GRGIKLTVIEEARKRQSAQAATPA 841
           G+GIKL++IEEARKR +AQ AT A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATTA 264


>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
           40S ribosomal S4 protein [Glycine max]
           gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  498 bits (1283), Expect = e-139
 Identities = 238/264 (90%), Positives = 256/264 (96%)
 Frame = +2

Query: 50  MARGLKKHLKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 229
           MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 230 VVAILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 409
           V+AILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 410 FKLCKVRSVQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNV 589
           FKLCKVRSVQ GQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLE +KIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 590 IMVTGGRNRGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGTKPWLSLPK 769
           +MVTGGRNRGRVG+IK REKH G+FET+HVQD+TGHEFATR+GNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 770 GRGIKLTVIEEARKRQSAQAATPA 841
           G+GIKL++IEEARKR +AQ AT A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATAA 264


>gb|ACU24295.1| unknown [Glycine max]
          Length = 264

 Score =  497 bits (1280), Expect = e-138
 Identities = 238/264 (90%), Positives = 256/264 (96%)
 Frame = +2

Query: 50  MARGLKKHLKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 229
           MARGLKK+LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKYLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 230 VVAILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 409
           V+AILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+D+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 410 FKLCKVRSVQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNV 589
           FKLCKVRSVQ GQKGIPYLNTYDGRTIRYPDPLIRANDT+KLDLE +KIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180

Query: 590 IMVTGGRNRGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGTKPWLSLPK 769
           +MVTGGRNRGRVG+IK REKH G+FET+HVQDATGHEFATR+GNV+TIGKGTKPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 770 GRGIKLTVIEEARKRQSAQAATPA 841
           G+GIKL++IEEARKR +AQ AT A
Sbjct: 241 GKGIKLSIIEEARKRIAAQQATTA 264