BLASTX nr result

ID: Coptis23_contig00002586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002586
         (1702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...   607   e-171
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   607   e-171
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              607   e-171
emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]   607   e-171
ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|2...   572   e-160

>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score =  607 bits (1564), Expect = e-171
 Identities = 309/434 (71%), Positives = 355/434 (81%)
 Frame = +3

Query: 3    VLGSVPKEVLPSYINLVRDAISTSRDKERREKKGGPVLIPGFCLPKCLQPLLPVFLQGLI 182
            V  SVPKEVLPSYI +VRDA+STSRDKERR+KKGGPVLIPGFCLPK LQPLLPVFLQGLI
Sbjct: 2012 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQGLI 2071

Query: 183  SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLCII 362
            SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTL II
Sbjct: 2072 SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLSII 2131

Query: 363  IKKGGVALKPFLPQLQTTFIKCLQDNARNVRSTXXXXXXXXXXXXXRVDPLVSDLLTNLQ 542
            I+KGG+ALKPFLPQLQTTFIKCLQDN R VRS+             RVDPLV DLL++LQ
Sbjct: 2132 IRKGGIALKPFLPQLQTTFIKCLQDNTRTVRSSAALALGKLSALSTRVDPLVGDLLSSLQ 2191

Query: 543  ASDGGVREAVLTALKGVIKHAGKSVSAATKTRVVVILKDLIHVDDDQIRNCAARVLGTMS 722
             SDGGVREA+LTALKGV++HAGKSVS A +TRV V+LKD +H DDDQ+RN AA +LG +S
Sbjct: 2192 VSDGGVREAILTALKGVLQHAGKSVSVAVRTRVYVLLKDFVHHDDDQVRNSAASILGILS 2251

Query: 723  QYXXXXXXXXXXXXXXXXXXXATWFIRHGSILTISSLLRHHPTGVNLSSVLPSIVDQLKD 902
            QY                    +W  RHGSILTISS+LRH P+ +  S V PS+V  LKD
Sbjct: 2252 QYMEDGQLSDLLQELSSLDSSLSWSARHGSILTISSMLRHSPSSICTSPVFPSVVYCLKD 2311

Query: 903  ILKDDKFPIRESATKALGRLILHQCKNEASNYGIQVELYPLLLSALQDDSSEVRRRALSS 1082
             LKD+KFP+RE++TKALGRL+LH+ +++ SN    +++   ++SALQDDSSEVRRRALS+
Sbjct: 2312 NLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEVRRRALSA 2371

Query: 1083 LKAIAKENPAAIMAYLPNFGPVLADCLKDGNTPVRLAAERCALHVFQLARGLDNVQAAQK 1262
            LKA+AK NP+A+M ++  FGP LA+CLKDGNTPVRLAAERCALH FQL +G +NVQAAQK
Sbjct: 2372 LKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAERCALHAFQLTKGTENVQAAQK 2431

Query: 1263 FITGLEARRLSKLP 1304
            FITGL+ARRLSK P
Sbjct: 2432 FITGLDARRLSKFP 2445


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  607 bits (1564), Expect = e-171
 Identities = 309/434 (71%), Positives = 355/434 (81%)
 Frame = +3

Query: 3    VLGSVPKEVLPSYINLVRDAISTSRDKERREKKGGPVLIPGFCLPKCLQPLLPVFLQGLI 182
            V  SVPKEVLPSYI +VRDA+STSRDKERR+KKGGPVLIPGFCLPK LQPLLPVFLQGLI
Sbjct: 2164 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQGLI 2223

Query: 183  SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLCII 362
            SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTL II
Sbjct: 2224 SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLSII 2283

Query: 363  IKKGGVALKPFLPQLQTTFIKCLQDNARNVRSTXXXXXXXXXXXXXRVDPLVSDLLTNLQ 542
            I+KGG+ALKPFLPQLQTTFIKCLQDN R VRS+             RVDPLV DLL++LQ
Sbjct: 2284 IRKGGIALKPFLPQLQTTFIKCLQDNTRTVRSSAALALGKLSALSTRVDPLVGDLLSSLQ 2343

Query: 543  ASDGGVREAVLTALKGVIKHAGKSVSAATKTRVVVILKDLIHVDDDQIRNCAARVLGTMS 722
             SDGGVREA+LTALKGV++HAGKSVS A +TRV V+LKD +H DDDQ+RN AA +LG +S
Sbjct: 2344 VSDGGVREAILTALKGVLQHAGKSVSVAVRTRVYVLLKDFVHHDDDQVRNSAASILGILS 2403

Query: 723  QYXXXXXXXXXXXXXXXXXXXATWFIRHGSILTISSLLRHHPTGVNLSSVLPSIVDQLKD 902
            QY                    +W  RHGSILTISS+LRH P+ +  S V PS+V  LKD
Sbjct: 2404 QYMEDGQLSDLLQELSSLDSSLSWSARHGSILTISSMLRHSPSSICTSPVFPSVVYCLKD 2463

Query: 903  ILKDDKFPIRESATKALGRLILHQCKNEASNYGIQVELYPLLLSALQDDSSEVRRRALSS 1082
             LKD+KFP+RE++TKALGRL+LH+ +++ SN    +++   ++SALQDDSSEVRRRALS+
Sbjct: 2464 NLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEVRRRALSA 2523

Query: 1083 LKAIAKENPAAIMAYLPNFGPVLADCLKDGNTPVRLAAERCALHVFQLARGLDNVQAAQK 1262
            LKA+AK NP+A+M ++  FGP LA+CLKDGNTPVRLAAERCALH FQL +G +NVQAAQK
Sbjct: 2524 LKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAERCALHAFQLTKGTENVQAAQK 2583

Query: 1263 FITGLEARRLSKLP 1304
            FITGL+ARRLSK P
Sbjct: 2584 FITGLDARRLSKFP 2597


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  607 bits (1564), Expect = e-171
 Identities = 309/434 (71%), Positives = 355/434 (81%)
 Frame = +3

Query: 3    VLGSVPKEVLPSYINLVRDAISTSRDKERREKKGGPVLIPGFCLPKCLQPLLPVFLQGLI 182
            V  SVPKEVLPSYI +VRDA+STSRDKERR+KKGGPVLIPGFCLPK LQPLLPVFLQGLI
Sbjct: 2187 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQGLI 2246

Query: 183  SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLCII 362
            SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTL II
Sbjct: 2247 SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLSII 2306

Query: 363  IKKGGVALKPFLPQLQTTFIKCLQDNARNVRSTXXXXXXXXXXXXXRVDPLVSDLLTNLQ 542
            I+KGG+ALKPFLPQLQTTFIKCLQDN R VRS+             RVDPLV DLL++LQ
Sbjct: 2307 IRKGGIALKPFLPQLQTTFIKCLQDNTRTVRSSAALALGKLSALSTRVDPLVGDLLSSLQ 2366

Query: 543  ASDGGVREAVLTALKGVIKHAGKSVSAATKTRVVVILKDLIHVDDDQIRNCAARVLGTMS 722
             SDGGVREA+LTALKGV++HAGKSVS A +TRV V+LKD +H DDDQ+RN AA +LG +S
Sbjct: 2367 VSDGGVREAILTALKGVLQHAGKSVSVAVRTRVYVLLKDFVHHDDDQVRNSAASILGILS 2426

Query: 723  QYXXXXXXXXXXXXXXXXXXXATWFIRHGSILTISSLLRHHPTGVNLSSVLPSIVDQLKD 902
            QY                    +W  RHGSILTISS+LRH P+ +  S V PS+V  LKD
Sbjct: 2427 QYMEDGQLSDLLQELSSLDSSLSWSARHGSILTISSMLRHSPSSICTSPVFPSVVYCLKD 2486

Query: 903  ILKDDKFPIRESATKALGRLILHQCKNEASNYGIQVELYPLLLSALQDDSSEVRRRALSS 1082
             LKD+KFP+RE++TKALGRL+LH+ +++ SN    +++   ++SALQDDSSEVRRRALS+
Sbjct: 2487 NLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEVRRRALSA 2546

Query: 1083 LKAIAKENPAAIMAYLPNFGPVLADCLKDGNTPVRLAAERCALHVFQLARGLDNVQAAQK 1262
            LKA+AK NP+A+M ++  FGP LA+CLKDGNTPVRLAAERCALH FQL +G +NVQAAQK
Sbjct: 2547 LKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAERCALHAFQLTKGTENVQAAQK 2606

Query: 1263 FITGLEARRLSKLP 1304
            FITGL+ARRLSK P
Sbjct: 2607 FITGLDARRLSKFP 2620


>emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]
          Length = 720

 Score =  607 bits (1564), Expect = e-171
 Identities = 309/434 (71%), Positives = 355/434 (81%)
 Frame = +3

Query: 3    VLGSVPKEVLPSYINLVRDAISTSRDKERREKKGGPVLIPGFCLPKCLQPLLPVFLQGLI 182
            V  SVPKEVLPSYI +VRDA+STSRDKERR+KKGGPVLIPGFCLPK LQPLLPVFLQGLI
Sbjct: 271  VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQGLI 330

Query: 183  SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLCII 362
            SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTL II
Sbjct: 331  SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLSII 390

Query: 363  IKKGGVALKPFLPQLQTTFIKCLQDNARNVRSTXXXXXXXXXXXXXRVDPLVSDLLTNLQ 542
            I+KGG+ALKPFLPQLQTTFIKCLQDN R VRS+             RVDPLV DLL++LQ
Sbjct: 391  IRKGGIALKPFLPQLQTTFIKCLQDNTRTVRSSAALALGKLSALSTRVDPLVGDLLSSLQ 450

Query: 543  ASDGGVREAVLTALKGVIKHAGKSVSAATKTRVVVILKDLIHVDDDQIRNCAARVLGTMS 722
             SDGGVREA+LTALKGV++HAGKSVS A +TRV V+LKD +H DDDQ+RN AA +LG +S
Sbjct: 451  VSDGGVREAILTALKGVLQHAGKSVSVAVRTRVYVLLKDFVHHDDDQVRNSAASILGILS 510

Query: 723  QYXXXXXXXXXXXXXXXXXXXATWFIRHGSILTISSLLRHHPTGVNLSSVLPSIVDQLKD 902
            QY                    +W  RHGSILTISS+LRH P+ +  S V PS+V  LKD
Sbjct: 511  QYMEDGQLSDLLQELSSLDSSLSWSARHGSILTISSMLRHSPSSICTSPVFPSVVYCLKD 570

Query: 903  ILKDDKFPIRESATKALGRLILHQCKNEASNYGIQVELYPLLLSALQDDSSEVRRRALSS 1082
             LKD+KFP+RE++TKALGRL+LH+ +++ SN    +++   ++SALQDDSSEVRRRALS+
Sbjct: 571  NLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEVRRRALSA 630

Query: 1083 LKAIAKENPAAIMAYLPNFGPVLADCLKDGNTPVRLAAERCALHVFQLARGLDNVQAAQK 1262
            LKA+AK NP+A+M ++  FGP LA+CLKDGNTPVRLAAERCALH FQL +G +NVQAAQK
Sbjct: 631  LKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAERCALHAFQLTKGTENVQAAQK 690

Query: 1263 FITGLEARRLSKLP 1304
            FITGL+ARRLSK P
Sbjct: 691  FITGLDARRLSKFP 704


>ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|222862668|gb|EEF00175.1|
            predicted protein [Populus trichocarpa]
          Length = 865

 Score =  572 bits (1473), Expect = e-160
 Identities = 294/434 (67%), Positives = 345/434 (79%)
 Frame = +3

Query: 3    VLGSVPKEVLPSYINLVRDAISTSRDKERREKKGGPVLIPGFCLPKCLQPLLPVFLQGLI 182
            V+GSVPKEVLPSYI LVRDA+STSRDKERR+KKGGPV+IPGFCLPK LQPLLP+FLQGL 
Sbjct: 416  VIGSVPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPVVIPGFCLPKALQPLLPIFLQGLT 475

Query: 183  SGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLCII 362
            SGSAELREQAA GLGELIEVTSE+ALK+FVIPITGPLIRIIGDRFPWQVKSAILSTL I+
Sbjct: 476  SGSAELREQAALGLGELIEVTSEKALKDFVIPITGPLIRIIGDRFPWQVKSAILSTLSIL 535

Query: 363  IKKGGVALKPFLPQLQTTFIKCLQDNARNVRSTXXXXXXXXXXXXXRVDPLVSDLLTNLQ 542
            I+KGG++L+PFLPQLQTTFIKCLQD+ R VR++             RVDPLVSDLL++LQ
Sbjct: 536  IRKGGMSLRPFLPQLQTTFIKCLQDSTRTVRTSAAFALGKLSALSTRVDPLVSDLLSSLQ 595

Query: 543  ASDGGVREAVLTALKGVIKHAGKSVSAATKTRVVVILKDLIHVDDDQIRNCAARVLGTMS 722
            ASD GVREA+LTALKGV+KHAGKSVS   + RV   LKDLIH DDDQ+R  AA +LG  S
Sbjct: 596  ASDAGVREAILTALKGVLKHAGKSVSDPVRVRVFSQLKDLIHHDDDQVRISAASILGITS 655

Query: 723  QYXXXXXXXXXXXXXXXXXXXATWFIRHGSILTISSLLRHHPTGVNLSSVLPSIVDQLKD 902
            QY                    +W  RHGS+LTISSLLRH+P+ V  S + PSI+  LKD
Sbjct: 656  QYMEEPQLDDLLELLSNLASSPSWVSRHGSVLTISSLLRHNPSSVVTSQMFPSIMRCLKD 715

Query: 903  ILKDDKFPIRESATKALGRLILHQCKNEASNYGIQVELYPLLLSALQDDSSEVRRRALSS 1082
             LKD+KFP+RE++TKALGRLILHQ +++ S     V++   ++SAL DDSSEVRRR LS+
Sbjct: 716  ALKDEKFPLRETSTKALGRLILHQIQSDPSEATAYVDIISTIVSALHDDSSEVRRRGLSA 775

Query: 1083 LKAIAKENPAAIMAYLPNFGPVLADCLKDGNTPVRLAAERCALHVFQLARGLDNVQAAQK 1262
            LKA+AK +P +I  ++   GP LA+CLKD +TPVRLAAERCA+H FQ+ +G DNVQAAQK
Sbjct: 776  LKAVAKASPPSITVHVSIIGPALAECLKDSSTPVRLAAERCAVHAFQMTKGTDNVQAAQK 835

Query: 1263 FITGLEARRLSKLP 1304
            FITGL+ARRLSK P
Sbjct: 836  FITGLDARRLSKFP 849


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