BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002583
         (1513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote...   588   e-165
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu...   582   e-163
ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|2...   568   e-159
ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol...   558   e-156

>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 1
            [Vitis vinifera] gi|359480890|ref|XP_003632540.1|
            PREDICTED: uncharacterized RNA-binding protein
            C660.15-like isoform 2 [Vitis vinifera]
            gi|296082418|emb|CBI21423.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  588 bits (1516), Expect = e-165
 Identities = 290/356 (81%), Positives = 317/356 (89%), Gaps = 2/356 (0%)
 Frame = -2

Query: 1323 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 1144
            MDNKLVVLGIPWDVDT+GLR+YMSKFG+L DVIVMKER+TGRSRGFGY TF S EDAKK 
Sbjct: 1    MDNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKV 60

Query: 1143 LTAEHFLGSRMLEVKIATPKEEM-RAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 967
            L++EHFLG+RMLEVK+ATPKEEM RAP KK+TRIFVARIP SV EAAFRSYFETYG+ITD
Sbjct: 61   LSSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITD 120

Query: 966  LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 787
            LYMPKD  +KGHRGIGFITF S++SVD+LM ETHEL GS +VVDRATPK+E+ RP SRV 
Sbjct: 121  LYMPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRVP 180

Query: 786  HGGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 607
             GGYGAYNAY+TAATRYAALGAPTLYDHP + YGRG  E  R +GKKIFVGRLPQEASA+
Sbjct: 181  QGGYGAYNAYITAATRYAALGAPTLYDHPGSVYGRG--ESTRAMGKKIFVGRLPQEASAE 238

Query: 606  DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 427
            DLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICGQQVAIDSA
Sbjct: 239  DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 298

Query: 426  APLDDAGPSGGYMM-NPEPFGGYGGPMRSYSRMYGSLDFDDWGYGSAGPSRPSRMD 262
             PLDDAG SG +MM + EPFGG+GGPMR+Y RMYGSLDFDDWGYG  G  RPSR D
Sbjct: 299  TPLDDAGSSGNFMMDSAEPFGGFGGPMRTYGRMYGSLDFDDWGYGIGG-GRPSRAD 353


>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
            gi|223537154|gb|EEF38787.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 359

 Score =  582 bits (1499), Expect = e-163
 Identities = 282/356 (79%), Positives = 317/356 (89%), Gaps = 2/356 (0%)
 Frame = -2

Query: 1323 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 1144
            MD KLVVLGIPW+VDTEGLREYM+KFG+LDD IVMKER++GRSRGFGY TFAS EDAK A
Sbjct: 1    MDRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSA 60

Query: 1143 LTAEHFLGSRMLEVKIATPK-EEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 967
            L++EHFLG+RMLEVK+ATPK EEMRAPAKK+TRIFVARIPPSVTE  FRS+FE YG+I D
Sbjct: 61   LSSEHFLGNRMLEVKVATPKQEEMRAPAKKVTRIFVARIPPSVTETTFRSHFEKYGEIID 120

Query: 966  LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 787
            LYMPKD S+K HRGIGFITF S+DSVDSLM++THEL GST+VVDRATPK++D RP  R++
Sbjct: 121  LYMPKDHSSKAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMA 180

Query: 786  HGGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 607
            HGGYGAYNAY++AATRYAALGAPTLYDHP   YG G  EP RG+GKKIFVGRLPQEA+ +
Sbjct: 181  HGGYGAYNAYISAATRYAALGAPTLYDHPGPMYGTG--EPARGVGKKIFVGRLPQEATPE 238

Query: 606  DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 427
            DLRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF E+GVA+RVSRRSHEICG QVAIDSA
Sbjct: 239  DLRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSA 298

Query: 426  APLDDAGPSGGYMMNPEP-FGGYGGPMRSYSRMYGSLDFDDWGYGSAGPSRPSRMD 262
             P+DDAGPSG +MMN  P FGGYGGP+R++ RMYGSLD+DDWGYG  G +RPSR D
Sbjct: 299  TPIDDAGPSGNFMMNAAPSFGGYGGPLRNFGRMYGSLDYDDWGYG-MGSARPSRAD 353


>ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|222856715|gb|EEE94262.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  568 bits (1463), Expect = e-159
 Identities = 276/364 (75%), Positives = 311/364 (85%), Gaps = 10/364 (2%)
 Frame = -2

Query: 1323 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 1144
            M  KLV+LGIPW++DTEGLR+YMSKFG+L+D IVMKER++GRSRGFGY TF S EDAK  
Sbjct: 1    MSQKLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60

Query: 1143 LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 964
            L+ EHFLG RMLE+K+ATPKEEMRAP KK TRIFVARIPPSVTE  FRS+FE YG+I DL
Sbjct: 61   LSGEHFLGKRMLEIKVATPKEEMRAPTKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120

Query: 963  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 784
            YMPKD S+K HRGIGFIT+ S+DSVDSLM+ETHEL GST+VVDRATPK++D RP +R + 
Sbjct: 121  YMPKDHSSKAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTAP 180

Query: 783  GGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 604
            GGYGAYNAY++AATRYAALGAPTLYDHP   YGRG  E  RG+GKKIFVGRLPQEAS +D
Sbjct: 181  GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASTED 238

Query: 603  LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 424
            LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA 
Sbjct: 239  LRQYFGRFGHIIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298

Query: 423  PLDDAGPSGGYMMN-PEPFGGYGGPMRSYSRMYGSLDFDD---------WGYGSAGPSRP 274
            P+DDAGPSG +MM+ PEPFGGYGGPMR++ RMYG+LD+DD         WGYG  G +RP
Sbjct: 299  PIDDAGPSGNFMMSAPEPFGGYGGPMRNFGRMYGTLDYDDAGAYMVPSKWGYG-MGSARP 357

Query: 273  SRMD 262
            SR D
Sbjct: 358  SRAD 361


>ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|222853041|gb|EEE90588.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  567 bits (1460), Expect = e-159
 Identities = 277/364 (76%), Positives = 312/364 (85%), Gaps = 10/364 (2%)
 Frame = -2

Query: 1323 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 1144
            MD KLVVLGIPW++DTEGLREYM+KFG L+D IVMKER++GRSRGFGY TF S EDAK  
Sbjct: 1    MDRKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60

Query: 1143 LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 964
            L++EHFLG RMLEVK+ATPKEEMRAP+KK TRIFVARIPPSVTE  FRS+FE YG+I DL
Sbjct: 61   LSSEHFLGKRMLEVKVATPKEEMRAPSKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120

Query: 963  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 784
            YMPKD S+K HRGIGFIT+ S+DSVD+LM+ETHEL GST+VVDRATPK++D RP  R++ 
Sbjct: 121  YMPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAP 180

Query: 783  GGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 604
            GGYGAYNAY++AATRYAALGAPTLYDHP   YGRG  E  RG+GKKIFVGRLPQEASA+D
Sbjct: 181  GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASAED 238

Query: 603  LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 424
            LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA 
Sbjct: 239  LRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298

Query: 423  PLDDAGPSGGYMMN-PEPFGGYGGPMRSYSRMYGSLDFDD---------WGYGSAGPSRP 274
            P+DDAGPSG +MM+ PEPFG Y GPMR++ RMYG+LD+DD         WGYG  G +RP
Sbjct: 299  PIDDAGPSGNFMMSGPEPFGSYAGPMRNFGRMYGTLDYDDASAYMVPSKWGYG-MGSARP 357

Query: 273  SRMD 262
            SR D
Sbjct: 358  SRAD 361


>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
            sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
            RNA-binding protein Musashi homolog 1-like [Cucumis
            sativus]
          Length = 377

 Score =  558 bits (1438), Expect = e-156
 Identities = 281/372 (75%), Positives = 314/372 (84%), Gaps = 18/372 (4%)
 Frame = -2

Query: 1323 MDNKLVVLGIPWDVDTEGLREYMSKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 1144
            MD KLVVLGIPWDVDTEGLREYMSKFG+L+D IVMKER+TGRSRGFGY TFA+ EDAK A
Sbjct: 1    MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 1143 LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 964
            L++EHFLG+RM+EVK+ATPKEEMRAP K++TRIFVARI  +VTEAAFRS+FE YG+ITDL
Sbjct: 61   LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 963  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 784
            YMPKDQ +K HRGIGFITF SSDSV++LM++THEL GS +VVDRATPKD+D RP  ++  
Sbjct: 121  YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQ 180

Query: 783  ------GGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGR---GLPEPVRGLGKKIFVGR 631
                  GGYGAYNAY++AATRYAALGAPTLYDHP + YG     +P   RG+GKKIFVGR
Sbjct: 181  GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLEFRGMGKKIFVGR 240

Query: 630  LPQEASADDLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICG 451
            LPQEASADDLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICG
Sbjct: 241  LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 300

Query: 450  QQVAIDSAAPLDDA-------GPSGGYMMN--PEPFGGYGGPMRSYSRMYGSLDFDDWGY 298
            QQVAIDSA PLDDA       G SG +MMN   + FGGY GPMR+Y RMYGSLDFDDWGY
Sbjct: 301  QQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGY 360

Query: 297  GSAGPSRPSRMD 262
            G  G  RPSR D
Sbjct: 361  GIGG-GRPSRAD 371