BLASTX nr result

ID: Coptis23_contig00002571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002571
         (1727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630858.1| Proline-rich protein [Medicago truncatula] g...   225   3e-56
ref|XP_002318548.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-55
ref|XP_003530689.1| PREDICTED: uncharacterized protein LOC100801...   211   4e-52
gb|ACU17692.1| unknown [Glycine max]                                  208   3e-51
ref|XP_003525254.1| PREDICTED: uncharacterized protein LOC100811...   204   8e-50

>ref|XP_003630858.1| Proline-rich protein [Medicago truncatula]
            gi|355524880|gb|AET05334.1| Proline-rich protein
            [Medicago truncatula] gi|388509644|gb|AFK42888.1| unknown
            [Medicago truncatula]
          Length = 395

 Score =  225 bits (573), Expect = 3e-56
 Identities = 152/397 (38%), Positives = 188/397 (47%), Gaps = 7/397 (1%)
 Frame = +2

Query: 86   MAGKQMASDSFTSNLAGMSKNQLYDIMSQMKTLIEQNQQQARQILVDNPSLTRALFQAQI 265
            MAGKQ++ +  ++NLAGMSKNQLYDIMSQMK LIEQNQQQA+QIL+ NP LT+ALFQAQI
Sbjct: 1    MAGKQVSGEGLSANLAGMSKNQLYDIMSQMKNLIEQNQQQAKQILIQNPMLTKALFQAQI 60

Query: 266  MLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GPQDHGSAPQIQIPSR 433
            MLGM                                        G QD     Q QIP R
Sbjct: 61   MLGMVQSQQAVPKVQPIAPQNNQQSVQPTQRPSVQPAPILPAQGGIQDQAGVSQTQIPPR 120

Query: 434  RPSNITVSSIPSASFPPVSHQAQTMPSHSLQSMQPAKGHMNTQGTSMSLPQSSQTHGVPP 613
            +  N     +  A+ P  SHQ+Q   +HSLQ  Q  KGH+  Q    S+PQSSQ   +PP
Sbjct: 121  KHQNQPSVPVSYAAVPATSHQSQPTAAHSLQMPQQPKGHLTPQVAPASVPQSSQLPHIPP 180

Query: 614  HPLQSALQPPLFHXXXXXXXXXXXXXXLHTSVAQHIXXXXXXXXXXXXXXXXXFQHQLHP 793
              + S+ QP   H              L T    H+                 F  Q  P
Sbjct: 181  PSVHSSSQP--LHPTQMPTASSQAHQPLQTPGFSHMPLQPPLPPQPRPPSVQTFHPQYPP 238

Query: 794  QMGPHSGFQSSGASQPHLSQPSFSAGNSRPGSFGSSFXXXXXXXXXXXXXXSLYQ-GGSH 970
             +G + GFQ +G +  +L  P F AG ++P S GS+F              S YQ G   
Sbjct: 239  PIGANLGFQHAGGASHNLPPPMFHAG-AKPPSVGSTFPPGQALLPSQQSSQSSYQVGNIP 297

Query: 971  VGMDINNQAGSSMHVDR-ASWMPGPQEN-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXTS 1144
             G D ++QAG++M ++R +SWMPGP EN A                            T 
Sbjct: 298  FGSDFSSQAGNAMQIERGSSWMPGPSENLAQHSGPQGPSSMVSGQIGAANQPPRPPALTP 357

Query: 1145 EMEKALLQQVMSLTQEQINLLPPEXXXXXXXXXXMMR 1255
            +MEKALLQQVMSLT EQINLLPPE          M+R
Sbjct: 358  DMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQLMLR 394


>ref|XP_002318548.1| predicted protein [Populus trichocarpa] gi|222859221|gb|EEE96768.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  222 bits (565), Expect = 3e-55
 Identities = 149/396 (37%), Positives = 183/396 (46%), Gaps = 6/396 (1%)
 Frame = +2

Query: 86   MAGKQMASDSFTSNLAGMSKNQLYDIMSQMKTLIEQNQQQARQILVDNPSLTRALFQAQI 265
            M GK +A +   +NLAGM+KNQLYDIM QMKTLIEQN+QQA++IL+ NP LT+ALFQAQI
Sbjct: 1    MTGKPIAGEGLPANLAGMTKNQLYDIMFQMKTLIEQNKQQAKEILIQNPLLTKALFQAQI 60

Query: 266  MLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GPQDHGSAPQIQIPSR 433
            MLGM                                          QD  S  Q Q P R
Sbjct: 61   MLGMVQPPQAIPNIQPAASQQPQLSAQPSRQSNIQAAQTLPGQGALQDQTSVSQSQPPMR 120

Query: 434  RP-SNITVSSIPSASFPPVSHQAQTMPSHSLQSMQPAKGHMNTQGTSMSLPQSSQTHGVP 610
            +   +    SI +   PPV+ Q+Q +PSH L   Q  KGH+N Q T MS+ Q SQ   +P
Sbjct: 121  KQHQSQPAMSISAPPGPPVNLQSQPLPSHPLHMPQQPKGHVNPQVTPMSVTQPSQLPNLP 180

Query: 611  PHPLQSALQPPLFHXXXXXXXXXXXXXXLHTSVAQHIXXXXXXXXXXXXXXXXXFQHQLH 790
            P    S  QP   H              L  +   H+                 F HQ  
Sbjct: 181  PASSHSVSQPLPIHQTQMSSVSSQLLLPLQKTGIPHLPLQQPFPSQPRTASVPSFHHQYG 240

Query: 791  PQMGPHSGFQSSGASQPHLSQPSFSAGNSRPGSFGSSFXXXXXXXXXXXXXXSLYQGGSH 970
             QMGP+ G+Q +GA   H SQP F + N    S G SF              S   GGSH
Sbjct: 241  QQMGPNMGYQHAGAPH-HPSQPMFHSSNKPQSSMGPSFPQGQPPLSIQQPPQSYQAGGSH 299

Query: 971  VGMDINNQAGSSMHVDR-ASWMPGPQENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSE 1147
            +G + N+Q  +SM VDR +SWM GP +++                            +SE
Sbjct: 300  LGAEYNSQVPTSMQVDRGSSWMSGPPDSSTMTQLAGPPQFNPGQMAQGNQPSRTAPMSSE 359

Query: 1148 MEKALLQQVMSLTQEQINLLPPEXXXXXXXXXXMMR 1255
            MEKALLQQVMSLT EQINLLPPE          M+R
Sbjct: 360  MEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLR 395


>ref|XP_003530689.1| PREDICTED: uncharacterized protein LOC100801770 [Glycine max]
          Length = 392

 Score =  211 bits (538), Expect = 4e-52
 Identities = 159/399 (39%), Positives = 184/399 (46%), Gaps = 9/399 (2%)
 Frame = +2

Query: 86   MAGKQMASDSFTSNLAGMSKNQLYDIMSQMKTLIEQNQQQARQILVDNPSLTRALFQAQI 265
            MAGKQ+  +   +NLAGMSKNQLYDIMSQMK LIEQNQQQARQIL+ NP LT+ALFQAQI
Sbjct: 1    MAGKQVG-EGLPANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKALFQAQI 59

Query: 266  MLGM----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQDHGSAPQIQIPSR 433
            MLGM                                        G QD     Q QIP R
Sbjct: 60   MLGMVQAPQVVPKVQPMVSQNNQQPVQPTQQPNIQPAPLLPGHGGAQDQAGVSQTQIPLR 119

Query: 434  RPSNITVSSIP-SASFPPVSHQAQTMPSHSLQSMQPAKGHMNTQGTSMSLPQSSQTHGVP 610
            +  N    S+P S++ P   HQ+Q M +HSL   Q  KGH   Q   +SLPQSSQ   +P
Sbjct: 120  KHQN--QPSVPVSSAVPAARHQSQPMAAHSLPMPQHPKGHPTPQMALVSLPQSSQLPNIP 177

Query: 611  PHPLQSALQPPLFHXXXXXXXXXXXXXXLHTSVAQHIXXXXXXXXXXXXXXXXXFQHQLH 790
            P  LQS+ QP   H              + TS    +                 F  Q  
Sbjct: 178  PPSLQSSSQP--LHPTQMATASSQLQQPMQTSGFPPL--QPPLPPQIRPTALPTFHPQYP 233

Query: 791  PQMGPHSGFQSSGASQPHLSQPSFSAGNSRPGSFGSSFXXXXXXXXXXXXXXSLYQ-GGS 967
            PQMG + GFQ +GAS  +L Q  F  G     S GS+F                YQ G  
Sbjct: 234  PQMGANMGFQHAGASH-NLPQSMFHPGTKPSASVGSTFPQGQTPLPGQPSSQPPYQVGNM 292

Query: 968  HVGMDINNQAGSSMHVDR-ASWMPGPQENA--XXXXXXXXXXXXXXXXXXXXXXXXXXXX 1138
             +G D  NQAG++M VDR +SWM GP EN                               
Sbjct: 293  PLGPDFGNQAGNAMQVDRGSSWMLGPSENLAHLSGPPGPPSVVSGQMGAAAKQPLRPPGL 352

Query: 1139 TSEMEKALLQQVMSLTQEQINLLPPEXXXXXXXXXXMMR 1255
            T EMEKALLQQVMSLT EQINLLPPE          M+R
Sbjct: 353  TPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLR 391


>gb|ACU17692.1| unknown [Glycine max]
          Length = 387

 Score =  208 bits (530), Expect = 3e-51
 Identities = 156/397 (39%), Positives = 184/397 (46%), Gaps = 7/397 (1%)
 Frame = +2

Query: 86   MAGKQMASDSFTSNLAGMSKNQLYDIMSQMKTLIEQNQQQARQILVDNPSLTRALFQAQI 265
            MAGKQ+  +  + NLAGMSKNQLYDIMSQMK+LIEQNQQQA+QIL+ NP LT+ALFQAQI
Sbjct: 1    MAGKQVGGEGLSVNLAGMSKNQLYDIMSQMKSLIEQNQQQAKQILIQNPMLTKALFQAQI 60

Query: 266  MLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GPQDHGSAPQIQIPSR 433
            MLGM                                        G QD     Q QIP R
Sbjct: 61   MLGMVQAPQTVPKVQPMVPQNNLQSVQPTQKPNIQPAPLLPGLGGAQDQAGVSQTQIPLR 120

Query: 434  RPSNITVSSIP-SASFPPVSHQAQTMPSHSLQSMQPAKGHMNTQGTSMSLPQSSQTHGVP 610
            +  N    S+P S++ P +SHQ+Q M + SL   Q  KGH+  Q    SLPQSSQ   +P
Sbjct: 121  KHQN--QPSVPVSSAVPALSHQSQPMAAQSLTMPQQPKGHLAPQVALASLPQSSQLPNIP 178

Query: 611  PHPLQSALQPPLFHXXXXXXXXXXXXXXLHTSVAQHIXXXXXXXXXXXXXXXXXFQHQLH 790
               L S  QP   H              L T    H+                 F  Q  
Sbjct: 179  SPSLHSLSQP--LHPTQMSTASSHLQHPLLTPGFPHM----PLPPQIRQPAMPTFHPQYP 232

Query: 791  PQMGPHSGFQSSGASQPHLSQPSFSAGNSRPGSFGSSFXXXXXXXXXXXXXXSLYQGGSH 970
            PQMG + GFQ +GAS  +LSQ  F  G   P S GS+F               +  G   
Sbjct: 233  PQMGANLGFQHAGASH-NLSQSMFHPGTKPPASVGSTFPQGLPSQKSSQPPYQV--GNVP 289

Query: 971  VGMDINNQAGSSMHVDR-ASWMPGPQEN-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXTS 1144
             G +  NQAG++M VDR AS MPGP +N A                            T 
Sbjct: 290  SGPEFGNQAGNAMQVDRGASLMPGPSDNLAHLSGPPGPPYVVSGQMGAANQPLRPPALTP 349

Query: 1145 EMEKALLQQVMSLTQEQINLLPPEXXXXXXXXXXMMR 1255
            +MEKALLQQVMSLT EQINLLPPE          M+R
Sbjct: 350  DMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLR 386


>ref|XP_003525254.1| PREDICTED: uncharacterized protein LOC100811481 [Glycine max]
          Length = 379

 Score =  204 bits (518), Expect = 8e-50
 Identities = 153/397 (38%), Positives = 178/397 (44%), Gaps = 7/397 (1%)
 Frame = +2

Query: 86   MAGKQMASDSFTSNLAGMSKNQLYDIMSQMKTLIEQNQQQARQILVDNPSLTRALFQAQI 265
            MAGK +  +   +NLAGMSKNQLYDIMSQMK LIEQNQQQARQIL+ NP LT+ALFQAQI
Sbjct: 1    MAGKHVGGEGLAANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKALFQAQI 60

Query: 266  MLGM----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQDHGSAPQIQIPSR 433
            MLGM                                        G QD     Q QIP R
Sbjct: 61   MLGMVQAPQVVSKVRPMVSQSNQQSVQLIQKPNIQPAPLLPGHGGAQDQAGVSQTQIPLR 120

Query: 434  RPSNITVSSIP-SASFPPVSHQAQTMPSHSLQSMQPAKGHMNTQGTSMSLPQSSQTHGVP 610
            +  N    S+P S++ P +SHQ+Q M +HSL   Q  KGH   Q   +SLPQSSQ   VP
Sbjct: 121  KHQN--QPSVPISSAVPAMSHQSQPMAAHSLPMPQQHKGHPTPQMAPVSLPQSSQLPNVP 178

Query: 611  PHPLQSALQPPLFHXXXXXXXXXXXXXXLHTSVAQHIXXXXXXXXXXXXXXXXXFQHQLH 790
                      P  H              L TS    +                 F  Q  
Sbjct: 179  ---------LPSLHQTQMATASSQLQQPLQTSGFPPL--QPPLPPQIRPTALPTFHPQYP 227

Query: 791  PQMGPHSGFQSSGASQPHLSQPSFSAGNSRPGSFGSSFXXXXXXXXXXXXXXSLYQ-GGS 967
            PQ+G + GFQ +G S  +L Q     G     S GS+F                YQ G  
Sbjct: 228  PQVGANMGFQHAGTSH-NLPQSMIHPGTKPSASVGSTFPQGQTPLPGQPSSQPPYQVGNM 286

Query: 968  HVGMDINNQAGSSMHVDR-ASWMPGPQENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTS 1144
             +G D  NQAG++M VDR +SW+PGP EN                             T 
Sbjct: 287  PLGPDFGNQAGNAMQVDRGSSWLPGPSEN-----LAHLSGPPGQMSAAANQLLRPPGLTP 341

Query: 1145 EMEKALLQQVMSLTQEQINLLPPEXXXXXXXXXXMMR 1255
            EMEKALLQQVMSLT EQINLLPPE          M+R
Sbjct: 342  EMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLR 378


Top