BLASTX nr result

ID: Coptis23_contig00002565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002565
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277953.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   337   6e-90
ref|XP_002263458.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   335   2e-89
ref|XP_002533687.1| zinc finger protein, putative [Ricinus commu...   313   6e-83
ref|XP_002515382.1| Salt-tolerance protein, putative [Ricinus co...   304   5e-80
gb|ACH73166.1| CONSTANS-like protein [Prunus persica]                 298   3e-78

>ref|XP_002277953.1| PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Vitis vinifera]
          Length = 361

 Score =  337 bits (863), Expect = 6e-90
 Identities = 208/384 (54%), Positives = 235/384 (61%), Gaps = 20/384 (5%)
 Frame = -1

Query: 1455 NHKGF-AGSWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMC 1279
            N K F A +W+L+AKPCDSCKSA+ALLFCRADSAFLC+ CDSKIH ANKLASRHERVWMC
Sbjct: 7    NGKTFSAATWALAAKPCDSCKSAAALLFCRADSAFLCVGCDSKIHGANKLASRHERVWMC 66

Query: 1278 EVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYES--XXXXXXXXXX 1105
            EVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRH+R PVVPFY+S            
Sbjct: 67   EVCEQAPASVTCKADAAALCVTCDRDIHSANPLARRHDRVPVVPFYDSAESLVKSTAAAV 126

Query: 1104 XVLLPDHLLKNEDEEMNNCVVXXXXXXXXXASWLLSNPAPKILETPDL--NQYFFSDVDP 931
              L+P      ED E               ASWLL  P PK+ E P++   + FFSD+DP
Sbjct: 127  GFLVPGGAGDEEDSE--------------AASWLL--PNPKLPEGPEVKSGEVFFSDIDP 170

Query: 930  YLDLEYGMAGKFSGH------GTDSVVPVQQTEPHVVPPFITP------EMDFCRXXXXX 787
            +LD +Y  A KF  H      G D VVPVQ  +P   PP          E+DF R     
Sbjct: 171  FLDFDYPDA-KFPHHHHHHCGGNDGVVPVQAKDPS--PPVTNHPADNCFELDFSRSKLSA 227

Query: 786  XXXXXXXXXXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAATGLVNXXXXXXQP 607
                                        S         +    G  +TG           
Sbjct: 228  YNYTAQSLSQSISSSDVGVVPDGNCNSMSDTSYPSMKQVSGGGGGGSTG---------SQ 278

Query: 606  ACQLTGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVE-VD 430
            A QL+GMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTE+E E VD
Sbjct: 279  ATQLSGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESEMVD 338

Query: 429  RLY--SSAASLMVDTSGYGIVPSF 364
             +Y  +SAA+ MVD +GYG+VPS+
Sbjct: 339  HIYNSASAAAFMVD-AGYGVVPSY 361


>ref|XP_002263458.1| PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Vitis vinifera]
          Length = 347

 Score =  335 bits (858), Expect = 2e-89
 Identities = 195/370 (52%), Positives = 224/370 (60%), Gaps = 13/370 (3%)
 Frame = -1

Query: 1434 SWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVCEQAPA 1255
            SW +++K CDSCKSA   LFCRADSAFLC+ CDSK+H ANKLASRH RVWMCEVCEQAPA
Sbjct: 7    SWRMASKLCDSCKSAPPTLFCRADSAFLCVACDSKVHAANKLASRHARVWMCEVCEQAPA 66

Query: 1254 SVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLPDHLLK 1075
             VTCKADAAALCVTCDRDIHSANPLARRHER PVVPFY+S           +L+ D    
Sbjct: 67   HVTCKADAAALCVTCDRDIHSANPLARRHERVPVVPFYDSAAAAAKSNAVNLLVDDRYYS 126

Query: 1074 NEDEEMNNCVVXXXXXXXXXASWLLSNPAPKILETPDLN--QYFFSDVDPYLDLEY-GMA 904
            + D + +             ASWLL NP PK+ E+ DLN   Y FSD+DPYLDL+Y  M 
Sbjct: 127  DPDGDASR-------EEAEAASWLLPNPNPKLAESSDLNSSHYMFSDIDPYLDLDYPSMD 179

Query: 903  GKFSGH------GTDSVVPVQQTEPHVVPPFITP---EMDFC-RXXXXXXXXXXXXXXXX 754
             K          GTD VVPVQ     V  P +     +MDF                   
Sbjct: 180  PKLQSQQQQQSSGTDGVVPVQNKS--VQAPLVNDNCFDMDFSGSKSFYNGQSLSQSVSSS 237

Query: 753  XXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAATGLVNXXXXXXQPACQLTGMDREA 574
                           + +PF  +M  G E +N TA                  +G+DREA
Sbjct: 238  SLEVGVVPDGNAMVDVTNPFGRSMNTGSESANQTAQIS---------------SGIDREA 282

Query: 573  RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVEVDRLYSSAASLMVD 394
            RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR+E+EV+    YSS+ +L  D
Sbjct: 283  RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEIEVD----YSSSGALTAD 338

Query: 393  TSGYGIVPSF 364
             SGYG+VPSF
Sbjct: 339  -SGYGVVPSF 347


>ref|XP_002533687.1| zinc finger protein, putative [Ricinus communis]
            gi|223526413|gb|EEF28695.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 388

 Score =  313 bits (803), Expect = 6e-83
 Identities = 184/400 (46%), Positives = 232/400 (58%), Gaps = 38/400 (9%)
 Frame = -1

Query: 1449 KGFAGSWSLSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVC 1270
            K   G W+++A+ CDSCK+A+A +FCRADSAFLC+ CD+KIH ANKL SRHERVWMCEVC
Sbjct: 9    KSLTGGWTVAARRCDSCKTAAAAVFCRADSAFLCLNCDAKIHAANKLVSRHERVWMCEVC 68

Query: 1269 EQAPASVTCKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLP 1090
            EQAPA+VTCKADAAALCVTCD DIHSANPLARRHER PV PF++S            L+P
Sbjct: 69   EQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPVEPFFDSAGSIVKSSPFNFLVP 128

Query: 1089 -DH---------LLKNEDEEMNNCVVXXXXXXXXXASWLLSNPAPKILETP--------- 967
             DH           ++ED+++               SWLL NP+  ++ +          
Sbjct: 129  TDHNGAGSAAFNHQQHEDDDVEG------------VSWLLPNPSSTMINSKLGGIENHEM 176

Query: 966  --------DLNQYFFSDVDPYLDLEYGMAGKFSGHGTDSVVPVQQTEP------HVVPPF 829
                         FF+++DP+LDLE+      S    DSVVPVQ T+P       V+   
Sbjct: 177  KSGHGGGGGSGDLFFTEMDPFLDLEFHQNNNHSSAANDSVVPVQITKPAAASSIPVMNND 236

Query: 828  ITPEMDFCR----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFS 661
            I  ++DFCR                                   I+ PF  NM N     
Sbjct: 237  ICYDIDFCRTKLSSFNYPTQSLSQSVSSSSLDVGVVPDGSSTSDISYPFGRNM-NTCTDP 295

Query: 660  NGTAATGLVNXXXXXXQPACQLTGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRP 481
            +G  +    N        A Q+ G++REARVLRYREKRKNRKFEKTIRYASRKAYAETRP
Sbjct: 296  SGPISGNSTN-------QAAQMCGINREARVLRYREKRKNRKFEKTIRYASRKAYAETRP 348

Query: 480  RIKGRFAKRTELEVEVDRLYSSAASL-MVDTSGYGIVPSF 364
            RIKGRFAKRTE++ ++DRLY+S +S+  +  + YG+VP+F
Sbjct: 349  RIKGRFAKRTEIDTDMDRLYNSPSSVSYLGDAQYGVVPTF 388


>ref|XP_002515382.1| Salt-tolerance protein, putative [Ricinus communis]
            gi|223545326|gb|EEF46831.1| Salt-tolerance protein,
            putative [Ricinus communis]
          Length = 332

 Score =  304 bits (778), Expect = 5e-80
 Identities = 184/366 (50%), Positives = 221/366 (60%), Gaps = 12/366 (3%)
 Frame = -1

Query: 1425 LSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVCEQAPASVT 1246
            +++K CDSCKSA+A LFCR DSAFLCI CDSKIH ANKLASRH RV +CEVCEQAPA VT
Sbjct: 1    MASKLCDSCKSATATLFCRPDSAFLCINCDSKIHAANKLASRHARVLICEVCEQAPAHVT 60

Query: 1245 CKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLPDHLLKNED 1066
            CKADAAALCVTCDRDIHSANPLARRHER P+ PFY+S            LL D    + D
Sbjct: 61   CKADAAALCVTCDRDIHSANPLARRHERVPITPFYDSVSSVNNKPNAVNLLDDRYFSDVD 120

Query: 1065 EEMNNCVVXXXXXXXXXASWLLSNPA-PKILETPDLN--QYFFSDVDPYLDLEYG----- 910
             +               ASWLL NP   K++E  D N  QY FSD+DPYLDL+YG     
Sbjct: 121  GD----AADVSREEAEAASWLLPNPPNTKLVENSDPNTGQYVFSDMDPYLDLDYGPGDPK 176

Query: 909  -MAGKFSGHGTDSVVPVQQTEPHVVPPFITP---EMDFCRXXXXXXXXXXXXXXXXXXXX 742
              A + +  GTD VVPV+ ++ +V  PF+     E+DF                      
Sbjct: 177  LEAQEQNSSGTDGVVPVKSSK-NVQAPFVNDNCFELDF-------------TGSKPFPYG 222

Query: 741  XXXXXXXXXXGINSPFVMNMRNGMEFSNGTAATGLVNXXXXXXQPACQLTGMDREARVLR 562
                        +S  V  + +G + SN  + + + +          QL+ +DREARVLR
Sbjct: 223  YNAQCLSNSVSSSSLDVGVVPDGGDISNPYSKSTMESVQ--------QLSAVDREARVLR 274

Query: 561  YREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVEVDRLYSSAASLMVDTSGY 382
            YREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT+++VE DR  S         + +
Sbjct: 275  YREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIDVEADRSSS--------INAF 326

Query: 381  GIVPSF 364
            G+VPSF
Sbjct: 327  GVVPSF 332


>gb|ACH73166.1| CONSTANS-like protein [Prunus persica]
          Length = 343

 Score =  298 bits (763), Expect = 3e-78
 Identities = 180/373 (48%), Positives = 215/373 (57%), Gaps = 19/373 (5%)
 Frame = -1

Query: 1425 LSAKPCDSCKSASALLFCRADSAFLCITCDSKIHTANKLASRHERVWMCEVCEQAPASVT 1246
            +++K CDSCKSA+A LFCRADSAFLC+ CDSKIH ANKLASRH RVW+CEVCEQAPA VT
Sbjct: 1    MASKLCDSCKSATATLFCRADSAFLCVNCDSKIHAANKLASRHARVWLCEVCEQAPAHVT 60

Query: 1245 CKADAAALCVTCDRDIHSANPLARRHERFPVVPFYESXXXXXXXXXXXVLLPDHLLKN-- 1072
            CKAD AALCVTCDRDIHSANPL+RRHER PV PFY+S             + + L     
Sbjct: 61   CKADDAALCVTCDRDIHSANPLSRRHERVPVTPFYDSGNSAANSAPVVKSVVNFLDDRYF 120

Query: 1071 EDEEMNNCVVXXXXXXXXXASWLLSNPAPKILETPDLN--QYFFSDVDPYLDLEYGM--- 907
             D +  +            ASWLL  P PK +E PDLN  +YF  ++DPYLDL+YG    
Sbjct: 121  SDVDGQDAETEVSREEAEAASWLL--PNPKAMENPDLNSGEYFLPEMDPYLDLDYGHVDP 178

Query: 906  ----AGKFSGHGTDSVVPVQ--QTEPHVVPPFITPEMDFCR------XXXXXXXXXXXXX 763
                A + +  GTD VVPVQ    +P +V    + E+DF                     
Sbjct: 179  KLEDAQEQNSCGTDGVVPVQSKSVQPQLVNDH-SFEIDFSAASKPYVYGFHAQCLSQSVS 237

Query: 762  XXXXXXXXXXXXXXXXXGINSPFVMNMRNGMEFSNGTAATGLVNXXXXXXQPACQLTGMD 583
                              +  P+  +M   +E ++                 A Q++  D
Sbjct: 238  SSSMDVSVVPDGNTTMTDVCDPYTKSMSAAVESTH----------------QAVQISSAD 281

Query: 582  REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTELEVEVDRLYSSAASL 403
            REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTE+E+E +RL       
Sbjct: 282  REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEVEIEAERL------- 334

Query: 402  MVDTSGYGIVPSF 364
                  YG+VPSF
Sbjct: 335  ----CRYGVVPSF 343


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