BLASTX nr result

ID: Coptis23_contig00002556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002556
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-36
ref|XP_003524128.1| PREDICTED: GATA transcription factor 26-like...   156   1e-35
dbj|BAJ34326.1| unnamed protein product [Thellungiella halophila]     156   1e-35
ref|XP_002531215.1| GATA transcription factor, putative [Ricinus...   156   2e-35
gb|ABK95062.1| unknown [Populus trichocarpa]                          154   5e-35

>ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|222833801|gb|EEE72278.1|
            predicted protein [Populus trichocarpa]
          Length = 544

 Score =  159 bits (402), Expect = 2e-36
 Identities = 96/232 (41%), Positives = 121/232 (52%), Gaps = 8/232 (3%)
 Frame = -1

Query: 1194 MGKQGPCCHCGVTSTPLWRNGPHEKPVLCNACGSRWRTKGSLVNYFPIQARVFTSPDYEG 1015
            MGKQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKG+L NY P+ AR     DYE 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-GPDDYED 59

Query: 1014 SRYSRKDKLPPLTKYKNSYIKV-----HNESKVEDGPSY---AAYPSSFXXXXXXXXXXX 859
             R SR   L  ++  KN  +K+     + + +V +G +      Y               
Sbjct: 60   HRVSR---LKSISMNKNREVKLLKRKPNYDHRVAEGVALDYNEGYRKVVDEDTSNRSSSG 116

Query: 858  XXXXXXXSCVQFGSTDGNEISGPFESSFCDVQIPSKKRTRVRRCSPPPIENLRQDLRCHS 679
                   SC QFGS D ++++GP +S   D  +PS+KRT V R                 
Sbjct: 117  SAISNSESCAQFGSADASDLTGPAQSVVWDSLVPSRKRTCVNR---------------PK 161

Query: 678  PSPVEKLRQDLVSILQQQDXXXXXXXXXXXXXXERDDLSFQSEIGHGSVLLK 523
            PSPVEKL +DL +IL +Q               + +      EIGHGSVL++
Sbjct: 162  PSPVEKLTKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIR 213


>ref|XP_003524128.1| PREDICTED: GATA transcription factor 26-like [Glycine max]
          Length = 542

 Score =  156 bits (395), Expect = 1e-35
 Identities = 107/272 (39%), Positives = 133/272 (48%), Gaps = 16/272 (5%)
 Frame = -1

Query: 1194 MGKQGPCCHCGVTSTPLWRNGPHEKPVLCNACGSRWRTKGSLVNYFPIQARVFTSPDYEG 1015
            MGKQGPC HCGVTSTPLWRNGP EKPVLCNACGSRWRTKG+L NY P+ AR   + DYE 
Sbjct: 1    MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-ENVDYED 59

Query: 1014 SRYSR-------KDKLPPLTKYKNSYIKVHNESKVEDGPSYA-AYPSSFXXXXXXXXXXX 859
             + SR       K+K   L K K +Y    +   V   P Y+  Y               
Sbjct: 60   QKVSRVKSISLNKNKEVKLAKRKQNYDNAASGGFV---PDYSQGYQKVVDEDTSNRSSSG 116

Query: 858  XXXXXXXSCVQFGSTDGNEISGPFESSFCDVQIPSKKRTRVRRCSPPPIENLRQDLRCHS 679
                   SC QFG TD ++++GP +S   D  +PSKKRT    C+  P            
Sbjct: 117  SAVSNSESCAQFGGTDASDLTGPAQSVVWDAMVPSKKRT----CAGRP-----------K 161

Query: 678  PSPVEKLRQDLVSILQQQDXXXXXXXXXXXXXXERDDLSFQS-------EIGHGSVLLK- 523
            PS VEKL +DL +IL +Q                 +DL F+S       EIGHGS+L++ 
Sbjct: 162  PSSVEKLTRDLCTILHEQQ--------SYFSASSEEDLLFESDTPMVSVEIGHGSILIRH 213

Query: 522  PQVXXXXXXXXXXSHRTENKASCIRKTYMGSS 427
            P            S   +NK   + + Y  SS
Sbjct: 214  PSSIARDEESEASSLSVDNKQCLMNEAYSFSS 245


>dbj|BAJ34326.1| unnamed protein product [Thellungiella halophila]
          Length = 516

 Score =  156 bits (395), Expect = 1e-35
 Identities = 92/233 (39%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
 Frame = -1

Query: 1194 MGKQGPCCHCGVTSTPLWRNGPHEKPVLCNACGSRWRTKGSLVNYFPIQARVFTSPDYEG 1015
            MGKQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKG+LVNY P+ +R       + 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTPLHSRADCDDHEDH 60

Query: 1014 SRYSRKDKLPPLTKYKNSYIKVHNESKVEDGPS---------YAAYPSSFXXXXXXXXXX 862
             RY R   +   +K K +  K+     +++  S         Y    +            
Sbjct: 61   QRYQRMKSISMSSKNKET--KMLKRKAIQENISIKRPLLEFNYGLKKAVVEEDASNRSSS 118

Query: 861  XXXXXXXXSCVQFGSTDGNEISGPFESSFCDVQIPSKKRTRVRRCSPPPIENLRQDLRCH 682
                    SC QF S DG+E++GP +S+  D  +PSK+RT V R                
Sbjct: 119  GSAISNSESCAQFSSADGSELTGPSQSNTWDTTVPSKRRTCVGR---------------P 163

Query: 681  SPSPVEKLRQDLVSILQQQDXXXXXXXXXXXXXXERDDLSFQSEIGHGSVLLK 523
              S VEKLR+DL +ILQ+Q                 +      EIGHGSVL++
Sbjct: 164  KSSSVEKLRKDLYNILQEQQSSCLSVSSEEDLLFGNEMSMVSVEIGHGSVLMR 216


>ref|XP_002531215.1| GATA transcription factor, putative [Ricinus communis]
            gi|223529175|gb|EEF31151.1| GATA transcription factor,
            putative [Ricinus communis]
          Length = 542

 Score =  156 bits (394), Expect = 2e-35
 Identities = 96/230 (41%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
 Frame = -1

Query: 1194 MGKQGPCCHCGVTSTPLWRNGPHEKPVLCNACGSRWRTKGSLVNYFPIQARVFTSPDYEG 1015
            MGKQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKG+L NY P+ AR     DYE 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-DPDDYED 59

Query: 1014 SRYSRKDKLPPLTKYKNSYI---KVHNESKVEDGPSY---AAYPSSFXXXXXXXXXXXXX 853
             R SR   +  + K K+  +   K ++++ V  G  +     Y                 
Sbjct: 60   HRVSRVKSI-SINKNKDVKLLKRKANHDNGVVGGVVHDYNQGYRKVLDEDISNRSSSGSA 118

Query: 852  XXXXXSCVQFGSTDGNEISGPFESSFCDVQIPSKKRTRVRRCSPPPIENLRQDLRCHSPS 673
                 SC QFGS D ++++GP +S   D  +PSKKRT V R                  S
Sbjct: 119  ISNSESCAQFGSADASDLTGPAQSVVWDSMVPSKKRTCVNR---------------PKQS 163

Query: 672  PVEKLRQDLVSILQQQDXXXXXXXXXXXXXXERDDLSFQSEIGHGSVLLK 523
            PVEKL +DL +IL +Q               E +      EIGHGSVL++
Sbjct: 164  PVEKLTKDLYTILHEQQSSCFSGSSEEDLLFESETPMVSVEIGHGSVLIR 213


>gb|ABK95062.1| unknown [Populus trichocarpa]
          Length = 540

 Score =  154 bits (390), Expect = 5e-35
 Identities = 106/305 (34%), Positives = 139/305 (45%), Gaps = 5/305 (1%)
 Frame = -1

Query: 1194 MGKQGPCCHCGVTSTPLWRNGPHEKPVLCNACGSRWRTKGSLVNYFPIQARVFTSPDYEG 1015
            MGKQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKG+L NY P+ AR     DYE 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-EPDDYED 59

Query: 1014 SRYSRKDKLPPLTKYKNSYIKVHNESKVEDGPSYAAYPSSFXXXXXXXXXXXXXXXXXXS 835
             R SR   L  ++  KN  +K+       D      Y   +                  S
Sbjct: 60   HRVSR---LKSVSISKNKEVKLLKRKPNYDNRVALDYNQGYRKVVDEDTSNRSSSGSAIS 116

Query: 834  ----CVQFGSTDGNEISGPFESSFCDVQIPSKKRTRVRRCSPPPIENLRQDLRCHSPSPV 667
                C QFGS + ++++GP +S   D  +PS+KRT V R                 PS V
Sbjct: 117  NPESCAQFGSAEASDLTGPAQSVVWDSLVPSRKRTCVNR---------------PKPSSV 161

Query: 666  EKLRQDLVSILQQQDXXXXXXXXXXXXXXERDDLSFQSEIGHGSVLLK-PQVXXXXXXXX 490
            EKL +DL +IL +Q               + +      EIGHGSVL++ P          
Sbjct: 162  EKLTKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIRHPSSIARDEESE 221

Query: 489  XXSHRTENKASCIRKTYMGSSYWSLQSQNNQICSLQSVKDDMIQDTGDTNELKENLVKQC 310
              S   ENK     + Y       + ++N  + +   + +     TG   + +E L +  
Sbjct: 222  ASSLSVENKQYLTNEAYSHPVILPVHNENKSVNTTYPITETTKNLTGQGMQ-QEQLKRDK 280

Query: 309  FSTNK 295
            F   K
Sbjct: 281  FPHEK 285


Top