BLASTX nr result

ID: Coptis23_contig00002531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002531
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285817.1| PREDICTED: uncharacterized protein At4g37920...   539   e-151
ref|XP_004138642.1| PREDICTED: uncharacterized protein At4g37920...   516   e-144
ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_002513854.1| conserved hypothetical protein [Ricinus comm...   512   e-142
ref|XP_003535049.1| PREDICTED: uncharacterized protein At4g37920...   502   e-139

>ref|XP_002285817.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic [Vitis
            vinifera] gi|302141900|emb|CBI19103.3| unnamed protein
            product [Vitis vinifera]
          Length = 429

 Score =  539 bits (1389), Expect = e-151
 Identities = 263/344 (76%), Positives = 309/344 (89%), Gaps = 1/344 (0%)
 Frame = -3

Query: 1197 GGKTDVPNDSETQYHDVLYDDKMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPH 1018
            G K D  +D E      L + KMIRVCDKLI VFMVDKPTPTDWRRLLAFS+EW N+RPH
Sbjct: 91   GEKRDGKDDPEC-----LDNHKMIRVCDKLIEVFMVDKPTPTDWRRLLAFSKEWSNIRPH 145

Query: 1017 FFRRCQERADAEDHSEMKHNLFRLARKLKEIDEDVERHNELLGVIKESA-SDISGLVARR 841
            F+RRCQ+RAD+E     KH+L RL RKLKEIDEDV+RHNELL VIK +  +DIS +VA+R
Sbjct: 146  FYRRCQDRADSEGDPGKKHSLLRLGRKLKEIDEDVKRHNELLEVIKGTPPADISAVVAKR 205

Query: 840  RKDFTKEFFLHLHTVAESYYDNPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKF 661
            RKDFTKEFF+HLHTVAESY+DNP+EQN LAKLGN C+AAVQ YDTASESIEALNAAELKF
Sbjct: 206  RKDFTKEFFVHLHTVAESYHDNPTEQNALAKLGNMCLAAVQTYDTASESIEALNAAELKF 265

Query: 660  QEIINSPSIDAACKKIDNLAEKNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKS 481
            Q+I+NSPS+D AC+KID+LAEKNQLDSALVLMITKAWSAAK+SNM KDE KD+L+HLY +
Sbjct: 266  QDILNSPSLDVACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMTKDEVKDVLFHLYTT 325

Query: 480  ARGNLQRLMPKEIRILKYLLTIEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTW 301
            ARGNLQRLMPKEIRILKYLLTIEDPE+++ +LKDAFTPGDE+EGKD+DCLYTTPEKLHTW
Sbjct: 326  ARGNLQRLMPKEIRILKYLLTIEDPEEKMSALKDAFTPGDEIEGKDVDCLYTTPEKLHTW 385

Query: 300  IKTVVEAYNFSREGTLIKEARDLMSPKVIQRLEEMKKVLENNFM 169
            ++TVV+A++FSREGTLI+EARDLM+PK+IQ+LEE+KK++++NFM
Sbjct: 386  MQTVVDAFHFSREGTLIREARDLMNPKIIQKLEELKKLVQDNFM 429


>ref|XP_004138642.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like
            [Cucumis sativus] gi|449490104|ref|XP_004158509.1|
            PREDICTED: uncharacterized protein At4g37920,
            chloroplastic-like [Cucumis sativus]
          Length = 437

 Score =  516 bits (1329), Expect = e-144
 Identities = 244/323 (75%), Positives = 294/323 (91%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1134 KMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDHSEMKHNL 955
            KM +VCDKLI VFM+DKPTP DWRRL+AFS+EW N+RPHFF RCQ+RA +ED   MKH L
Sbjct: 115  KMTKVCDKLIEVFMIDKPTPKDWRRLIAFSKEWDNIRPHFFNRCQDRAASEDDPGMKHKL 174

Query: 954  FRLARKLKEIDEDVERHNELLGVIKE-SASDISGLVARRRKDFTKEFFLHLHTVAESYYD 778
             R  RKLKEIDEDV+RHNELL V++  S S++  +++RRRKDFTKEFF+HLHTVA+SYYD
Sbjct: 175  LRFGRKLKEIDEDVQRHNELLEVVRATSPSELGEIISRRRKDFTKEFFVHLHTVAQSYYD 234

Query: 777  NPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLAE 598
            +P++QN LAKLGN+C+AAVQ YD A+E+IEALNAAELKFQ+IINSP+IDAAC+KIDNLAE
Sbjct: 235  DPAKQNALAKLGNSCLAAVQTYDAATENIEALNAAELKFQDIINSPTIDAACRKIDNLAE 294

Query: 597  KNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSARGNLQRLMPKEIRILKYLLT 418
            KNQLDSALVLMITKAWSAAK+SNM+K+EAKDILYHLY +ARGNLQRLMPKEIRILKYLLT
Sbjct: 295  KNQLDSALVLMITKAWSAAKESNMMKEEAKDILYHLYVTARGNLQRLMPKEIRILKYLLT 354

Query: 417  IEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEAR 238
            I DPE++L +LKDAFTPG+ELEG+D+DCLYTTPE+LHTW+KTVV+AY+FSREGTL++EAR
Sbjct: 355  INDPEEKLSALKDAFTPGEELEGQDVDCLYTTPEELHTWVKTVVDAYHFSREGTLVREAR 414

Query: 237  DLMSPKVIQRLEEMKKVLENNFM 169
            DLM+P++I +LEE+K ++E  FM
Sbjct: 415  DLMNPQLIVKLEELKGLIEKKFM 437


>ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|222843997|gb|EEE81544.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  516 bits (1329), Expect = e-144
 Identities = 244/321 (76%), Positives = 292/321 (90%)
 Frame = -3

Query: 1131 MIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDHSEMKHNLF 952
            M  VC+KLI VFMVDKPTP DWR+LLAFS+EW NLRPHF++RCQERAD ED    KHNL 
Sbjct: 1    MASVCNKLIEVFMVDKPTPNDWRKLLAFSKEWDNLRPHFYKRCQERADCEDDPGKKHNLL 60

Query: 951  RLARKLKEIDEDVERHNELLGVIKESASDISGLVARRRKDFTKEFFLHLHTVAESYYDNP 772
            R ARKLKEIDEDV+RHNELLGVIK + S+++ +VA+RRKDFTKEFF+HL+TVA+SY+DNP
Sbjct: 61   RFARKLKEIDEDVQRHNELLGVIKAAPSELTEIVAKRRKDFTKEFFVHLYTVAQSYHDNP 120

Query: 771  SEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLAEKN 592
            SEQN LAKLGN CVA VQAYD A+E++EALNAAELK Q+IINSPS+DAACKKID+LAEKN
Sbjct: 121  SEQNALAKLGNDCVATVQAYDCATENMEALNAAELKLQDIINSPSLDAACKKIDDLAEKN 180

Query: 591  QLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSARGNLQRLMPKEIRILKYLLTIE 412
            Q DSALVLMITKAWSAAK+SNM KDE KDILYHLYK+A GNLQR +PK+IRILKYLLT+E
Sbjct: 181  QFDSALVLMITKAWSAAKESNMTKDEVKDILYHLYKTAIGNLQRNVPKDIRILKYLLTVE 240

Query: 411  DPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEARDL 232
            DPE+RLC+L DAFTPG+ELEGKD+D LYTTPEKLHTWIK +V+AY+ S++GTL++EARDL
Sbjct: 241  DPEERLCALNDAFTPGEELEGKDVDSLYTTPEKLHTWIKAMVDAYHLSQDGTLMREARDL 300

Query: 231  MSPKVIQRLEEMKKVLENNFM 169
            M+PK+I+++EE+KK++E++FM
Sbjct: 301  MNPKIIKKMEELKKLVEDHFM 321


>ref|XP_002513854.1| conserved hypothetical protein [Ricinus communis]
            gi|223546940|gb|EEF48437.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 399

 Score =  512 bits (1318), Expect = e-142
 Identities = 242/324 (74%), Positives = 294/324 (90%)
 Frame = -3

Query: 1140 DDKMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDHSEMKH 961
            +DKM+RVCDKLIGVFMVDK TP DWRRLLAFS+EW N+RPHF+ RCQERAD+E+   +KH
Sbjct: 76   EDKMVRVCDKLIGVFMVDKNTPADWRRLLAFSKEWDNIRPHFYSRCQERADSENDPGIKH 135

Query: 960  NLFRLARKLKEIDEDVERHNELLGVIKESASDISGLVARRRKDFTKEFFLHLHTVAESYY 781
             L R ARKLKEIDEDV+RHNELL VIK + S+IS +VARRRKDFTKEFF+H+ TVA+SY+
Sbjct: 136  KLLRFARKLKEIDEDVQRHNELLEVIKNAPSEISEVVARRRKDFTKEFFVHVFTVAQSYH 195

Query: 780  DNPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLA 601
            DNP+ QN LAKLGN CVAAVQAYD+ +ES+EAL+AAELK Q+IINSPS+D+AC+KID+LA
Sbjct: 196  DNPTVQNALAKLGNDCVAAVQAYDSTTESMEALHAAELKLQDIINSPSLDSACRKIDDLA 255

Query: 600  EKNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSARGNLQRLMPKEIRILKYLL 421
             KNQLDS+LVLMITKAWSAAK+SNM KDE KDIL+HLYK+A GNLQRL+PK+IRI+K+LL
Sbjct: 256  AKNQLDSSLVLMITKAWSAAKESNMTKDEVKDILFHLYKTAVGNLQRLVPKDIRIVKHLL 315

Query: 420  TIEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEA 241
             IEDPE+ LC+L DAFTPG+E+EG D+DCLYTTPEKLHTWIK VV+AY+ S+EGTLI+EA
Sbjct: 316  KIEDPEELLCALTDAFTPGEEIEGNDVDCLYTTPEKLHTWIKAVVDAYHSSQEGTLIREA 375

Query: 240  RDLMSPKVIQRLEEMKKVLENNFM 169
            RDLM+PK++++LEE+KK++E+NFM
Sbjct: 376  RDLMNPKIVKKLEELKKLIEDNFM 399


>ref|XP_003535049.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like
            [Glycine max]
          Length = 389

 Score =  502 bits (1292), Expect = e-139
 Identities = 243/329 (73%), Positives = 290/329 (88%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1152 DVLYDDKMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADA-EDH 976
            +VL + ++ RVCDKLIGVFMVDKPTPT WRRLLAFSREW NLRPHFF RC ERADA E+ 
Sbjct: 61   EVLEESRIRRVCDKLIGVFMVDKPTPTHWRRLLAFSREWSNLRPHFFARCLERADAAEED 120

Query: 975  SEMKHNLFRLARKLKEIDEDVERHNELLGVIKESASDISGLVARRRKDFTKEFFLHLHTV 796
              MK  L RLARKLK+IDEDV+RHN+LL V++   S IS +V++RRKDFT+EFF+H HTV
Sbjct: 121  PAMKEKLLRLARKLKQIDEDVQRHNDLLEVVRRDPSGISEIVSKRRKDFTEEFFVHFHTV 180

Query: 795  AESYYDNPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKK 616
            AESYY+N  EQN+LAKLGN C+AAVQAYD A+ES+E L AAELKFQ+IINSPS+DAAC+K
Sbjct: 181  AESYYENKEEQNELAKLGNACLAAVQAYDAATESVEKLQAAELKFQDIINSPSLDAACRK 240

Query: 615  IDNLAEKNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSARGNLQRLMPKEIRI 436
            IDNLAEK +LDS LVLMITKAWSA+K+SNM+KDE KDILYHLYK+A GNLQRL+PKEIRI
Sbjct: 241  IDNLAEKKELDSTLVLMITKAWSASKESNMMKDEVKDILYHLYKTAVGNLQRLVPKEIRI 300

Query: 435  LKYLLTIEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGT 256
            +KYL+ IEDPE++L +LKDAFTPG+ELEG D+D LYTTPEKLHTWIK+V++AY+ S EGT
Sbjct: 301  VKYLIRIEDPEEQLSALKDAFTPGEELEGTDVDNLYTTPEKLHTWIKSVLDAYHLSGEGT 360

Query: 255  LIKEARDLMSPKVIQRLEEMKKVLENNFM 169
            LI+EARDL++P+VIQ+LE +KKV+E NFM
Sbjct: 361  LIREARDLLNPEVIQKLEVLKKVVEKNFM 389


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